Dpha019049.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000081.1:2477599-2481032[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.7e-07 2.1e-05 25.2 4.7 1 23 258 280 258 280 0.98 2 11 0.075 5.7 8.1 3.3 2 23 377 399 375 399 0.89 3 11 0.00088 0.067 14.1 0.8 1 23 403 425 403 425 0.98 4 11 0.00025 0.019 15.9 0.6 2 23 447 469 446 469 0.93 5 11 0.16 13 7.0 1.1 1 23 473 496 473 496 0.95 6 11 0.021 1.6 9.8 0.8 2 23 519 541 518 541 0.91 7 11 1.6e-05 0.0012 19.7 3.0 1 23 551 573 551 574 0.96 8 11 0.0012 0.093 13.7 1.0 2 23 590 611 589 611 0.96 9 11 0.0088 0.67 11.0 0.4 1 23 617 639 617 639 0.94 10 11 0.75 58 4.9 3.1 1 21 645 665 645 669 0.90 11 11 0.022 1.7 9.7 0.1 3 23 717 737 715 737 0.97
Sequence Information
- Coding Sequence
- ATGTCATCACACTATAACGACTACTCTACAAATGAATCAACGAGTTTATATgacaatatacaaattaaagaaGAGGAAACTAATGagttaatattagatataaaaccAGAAAAGGAAGATATCAGTGATGATAAtccatttgaaaatattcaagttGAAGTTAAACATGAATATATAACTCCAAGCTGTGAAGATGATAAGCTCATGTCTGTACCTGTTGATGAGGCTGAAAACTATATAGAAACAGATAATGTTAGTGTaaacatagataataatatcaaaatggaAATGCCATATGAATATCCAAGTATAGATGATGGAAGTTTGGACAGTGAAGAGGCATCAGCTTTGAATAATGTGGAAGCATGTTTGCAAGATGACATTGATGTTAAAAGTGAAATTTTCGAAGAACATTCAAAAGaagatatagataaaataatcaaGGAAGAAATGGATATAACTGTAACAGAAACACATTTGATATCGAACAAGGTGATCAACACCACATCTACCATAACCAATCCACAAGATGGCTTGGTACAGTCACAAACTACCAAGACTCTAGTCATGGAAATACATCCTATGGCTGGGATAAGTAATTTAGACAAAATGGGGACTCCCGAAGAAATTTTACCAACATTCAATTCGGATTATGAGCACACGGCCGACTATGATGATTCTTTTCAATTAAATTCTATAACAGGAAATGTGTTATCACTTGAGCAGGAAGCCTACGGTTTGTTGAAAGCAGATCATTGTACGGAAAAAAGGTATAATTGCCATAAATGTGAGAAGTCGTTTAAGAAATCTAGCTACTTAAAGGCCCATATGAGGGTTCACGCGTCTATTGAAAATCGGGCTATGGGCTTAATCAAAGGGTTAAAGACGCGAATGGCGAATATGAAGAAGAAGATATACAAGGATATAGAGGATGATGTTAAAAGTGGAAGTGATACAATATCAAAAAGTAATTCTCGACTCGAAAGGTTGGAGAACAGGACGCGTGTGAAGGAAGAAGTGAAGAAAGAAGGATACGAGTGCACTTGCGGAGAGGTTTACAAGAGGAAGATAAGAATGATGAGCTGTTTGAGATCACACGACGAGTATAAAGACGCAGATTCTTGTTTCTCTTGCATTTCTTGCACGAAGCAGTTCAAAGACAAACAAGAGTTAGCATTACACAGAAAGAGATTACATAGAAAACGATTTCCTTGTAAATTTTGTCCAACAGATTACGGTACTCGGAAGGAACTGTTCAAACATTTACAAATTCACCAAAAAGTCCAGTTAATGGAATATAAGGTTATATCGGAGGTCGTTAAAGGGAAGCAGGAGTTGAAATGTTTTATGTGTTCCAAAAGTTTCTCAGAATTGTCAGAACTGAAGTCGCATGTCATGGACGACCATAAAGCACCTTACATTTGTCCACATTGCAACGGAAAGTTCATAAAGATCATAGACTTTGGGAATCACACGAAGATGTATCACCCAGAAGTAGAGGGGCAATCTGTTTTAGATGTTCTCGAGGCGTTTTCCAAGTTAGTACAAGCTTGGAAATGCGAAGAATGCCACTTACAATTTAACGAAGCCGATAAATTTGCGAAACACCAGGTGGAGAACCACAGTCCGGATTTGAAGGCGAAAGAACAGTTTCAGTGTACAGACTGTCGGCGTGTTTTTGTCAGTCAGAAAGGGTTGACCTCACACAAGCGTATTCACCACAACACAGATAGTGTAGAAGAGGCTGAAACGGAGGAAAAAGGTGTCATGTGTGTGGAATGTAGGAAAATATGCAAAGACGAGAACGCGCTGACGTCTCATATGCGGCTGCACTCGATGGATAGAAAGTATCCTTGCAAATTCTGCGACTTTCGCTTTGCAACTCCTGAGAAAAGAAAAGCTCATGCTGAATTACACACAGGCGACATGAAAtacgtttgttttatatgtgAATATCAGTGCAGTTCGGAAAACAGGCTGAAACAGCATAAAACATCAGTGAAACATTTAAACATGAAGGAGTTCTTACTTACTGGGAAGCCCTTGATCGAAGAACAGTCGACGTCTAAGAGAAGTAGGAAGAGTGATgacaaagaaaagaaaaagaaggTCAGCAGTTCATCATCGAGTGATGATAACGAGTCTATTTGTGACGTATGTGGTGATAGGTTTCCGAACGAGGAGGCCATGTTGAAACACAAACAGACACATCCATTTATTGAATTTCCCAATGAGGATACGCCTACTAGAATATTCTTTAAATGA
- Protein Sequence
- MSSHYNDYSTNESTSLYDNIQIKEEETNELILDIKPEKEDISDDNPFENIQVEVKHEYITPSCEDDKLMSVPVDEAENYIETDNVSVNIDNNIKMEMPYEYPSIDDGSLDSEEASALNNVEACLQDDIDVKSEIFEEHSKEDIDKIIKEEMDITVTETHLISNKVINTTSTITNPQDGLVQSQTTKTLVMEIHPMAGISNLDKMGTPEEILPTFNSDYEHTADYDDSFQLNSITGNVLSLEQEAYGLLKADHCTEKRYNCHKCEKSFKKSSYLKAHMRVHASIENRAMGLIKGLKTRMANMKKKIYKDIEDDVKSGSDTISKSNSRLERLENRTRVKEEVKKEGYECTCGEVYKRKIRMMSCLRSHDEYKDADSCFSCISCTKQFKDKQELALHRKRLHRKRFPCKFCPTDYGTRKELFKHLQIHQKVQLMEYKVISEVVKGKQELKCFMCSKSFSELSELKSHVMDDHKAPYICPHCNGKFIKIIDFGNHTKMYHPEVEGQSVLDVLEAFSKLVQAWKCEECHLQFNEADKFAKHQVENHSPDLKAKEQFQCTDCRRVFVSQKGLTSHKRIHHNTDSVEEAETEEKGVMCVECRKICKDENALTSHMRLHSMDRKYPCKFCDFRFATPEKRKAHAELHTGDMKYVCFICEYQCSSENRLKQHKTSVKHLNMKEFLLTGKPLIEEQSTSKRSRKSDDKEKKKKVSSSSSSDDNESICDVCGDRFPNEEAMLKHKQTHPFIEFPNEDTPTRIFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457514;
- 90% Identity
- iTF_00457514;
- 80% Identity
- -