Basic Information

Insect: Fabriciana adippe
Gene Symbol: -
Assembly: GCA_905404265.1
Location: FR990008.1:3344627-3347959[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.1e-08 6.5e-06 26.8 4.8 1 23 261 283 261 283 0.98

2 11 0.042 3.8 8.7 4.2 2 23 379 401 377 401 0.89

3 11 0.00012 0.011 16.7 1.2 1 23 405 427 405 427 0.98

4 11 0.041 3.7 8.7 0.5 2 23 449 471 448 471 0.92

5 11 0.072 6.6 7.9 1.3 1 23 475 498 475 498 0.97

6 11 0.014 1.3 10.2 0.3 2 23 521 543 520 543 0.91

7 11 1.7e-05 0.0016 19.3 3.0 1 23 553 575 553 576 0.96

8 11 0.0028 0.26 12.4 1.2 2 23 592 613 591 613 0.96

9 11 0.0078 0.71 11.0 0.4 1 23 619 641 619 641 0.94

10 11 0.35 32 5.8 3.1 1 22 647 668 647 671 0.90

11 11 0.01 0.93 10.6 0.3 2 23 723 744 722 744 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.1e-08	6.5e-06	26.8	4.8	1	23	261	283	261	283	0.98
2	11	0.042	3.8	8.7	4.2	2	23	379	401	377	401	0.89
3	11	0.00012	0.011	16.7	1.2	1	23	405	427	405	427	0.98
4	11	0.041	3.7	8.7	0.5	2	23	449	471	448	471	0.92
5	11	0.072	6.6	7.9	1.3	1	23	475	498	475	498	0.97
6	11	0.014	1.3	10.2	0.3	2	23	521	543	520	543	0.91
7	11	1.7e-05	0.0016	19.3	3.0	1	23	553	575	553	576	0.96
8	11	0.0028	0.26	12.4	1.2	2	23	592	613	591	613	0.96
9	11	0.0078	0.71	11.0	0.4	1	23	619	641	619	641	0.94
10	11	0.35	32	5.8	3.1	1	22	647	668	647	671	0.90
11	11	0.01	0.93	10.6	0.3	2	23	723	744	722	744	0.97

Sequence Information

Coding Sequence: ATGTCAACACAAAATTCTGAATACCAGACAAGTGATTCGATGAGTTTAATTGACAATATGCAAATTAAAGAGGAGGAAACTAATGAGTTAATATTAGATATTAAACCAGAGAAAGAAGATATTATTAGTGATGATAATCCATTTGAAAATGTTCAAGTAGAAGTTAAGGAGGAATTTATAACACCAAACTGTGAAGATGATAAAGAAAATATGTCTGTACCTGTTGATGAGGCTGAAAATTTTATAGAAACAGAAATTAATGATACAAATTTAGATGATAGTGTAAAAATGGAAATGCCATATGAATATCCAAGTGTTGATGACGGAAGTATGGACAGCGAGGAGGCCACAGCTCTCAATAATGTTGAAGCTTGTTTGCAAGATGAGATTAATATAAAACATGAAATCTATGAGGAGCAGTCCAAAGAGGACATCGACAAAATAATCAAAGAAGAAATGGACATAACAGTCACCGAAACACATTTAATATCAAACAAAGTGATCAATACCACATCAACTATTACAAACCCTCAAGATGGACTGGTGCAGTCACAAACAACTAAGACTTTAGTCATGGAAATTCACCCAATGGGCGGAGTGAATGTGTCATTGGGCAGGATGGGAAACCCTGAAGAAATATTGCCTACATTCAACTCTGAATATGACCAAGCTTCAGAGTATGATGAATCTTTTCAACTCAATTCAATAACAGGAAATGTACTGTCTCTAGAGCAAGAAGCATATGGCCTTCTTAAAGCAGATCATAGCACAGAAAAAAGATACAATTGCCACAAATGTGACAAGTCTTTCAAGAAATCCAGCTATTTAAAAGCTCATATGAGAGTGCATACTTCTATAGAAAATCGTGCGATGGGTCTAATTAAAGGTTTGAAAACGCGAATGGCAAATATGAAGAAAAAAATATGCAAAGATATCAAAGAAGAGGTAAAAAGTATAGGTAATACTTTCAAAAGTAACTCTCGACTTGAGAGATTGGAAAATCGTACTCGTATTAAGGAAGAAGTGAAAAAAGAAGGTTACGAATGCACTTGCGGCGAAGTTTATAAGCGAAAAATAAGAATGTTGAGTTGTCTAAGGTCACACGATGAATATAAAGCCACAGATTCTTGTTTTTCTTGCATTTCTTGCACCAAGCAGTTCAAAGACAAAAATGAATTAACATTACATAGAAAACGACTACATAGAAAGCGGTTTCCCTGTAAATTTTGTCCTACAGATTATAGTACTAGGAAGGAACTATTCAAGCATCTCCAAATACACCAGAAAGTGCAGCTAATGGAGTACAAAGTTATATCAGAAGTGGTGAAAGGGAAGCAGGAGCTAAAATGTTTTATGTGCTCGAAAAGCTTTTTAGAACTGTCCGAGTTGAAATCTCATGTAATGGACGACCATAAAGAACCCTATATTTGTCCACATTGCAATGGAAAATTCGTAAAAATTATTGATTTTGGCAATCATACAAAGACGTACCACCCCGAAGTCGAAGGTCAATCTGTTTTGGATGTGCTTGAAGCGTTCTCAAAATTGGTTCAGGCTTGGAAGTGTGAGGAGTGCAATCTACAGTTTAACGAAGCGGATAAGTTTGCAAAACACCAAGTCGAATATCATAGTCCAGATTTGAAAGCGAAAGAACAGTTCCAGTGTACTGATTGTAGACGAGTTTTTATTAGTCAGAAAGGATTGACGTCCCACAAACGGATACATCACAGCACTGGCAGTACAGAAGAAACTGAGTCGGTTGAAAAGGGTGTGATGTGTGTTGAGTGCAGGAAGATATGTAAGGATATGAACGCCTTAACTTCACATATGCGTCTACATTCACTGGACCGAAAGTACCCTTGCAAGTTCTGTGATTTTAGATTTGCAACCCCAGAAAAGAGAAAAGCCCACGCAGAACTACACACTGGAGATATGAAATATGTTTGTTTTATATGTGAATACCAGTGCAGTTCGGAGAACAGATTGAAGCAACATAAAATGTCTTTGAAGCATTTGAATATGAAAGAATTTTTACTAACTGGGAAGCCGTTGATTGAAGAGCAGTCGACGTCTAAAAAAAGTGATAGAAAAAGTGATAAAAAAAGTGATGAAAAAGAGAAGAAAAGGAAACACAGTAGTTCTTCGTCAGGTGATGAGAGGGAATCAACTTGTGATGTATGCGGTGATAAGTTCCCAAGTGAAGAGGACATGTTGAAACACAAACAAACACACCCTTTCATTGAATTTCCCAATGAAGACACACCTACTAGAATATTCTTTAAGTAA
Protein Sequence: MSTQNSEYQTSDSMSLIDNMQIKEEETNELILDIKPEKEDIISDDNPFENVQVEVKEEFITPNCEDDKENMSVPVDEAENFIETEINDTNLDDSVKMEMPYEYPSVDDGSMDSEEATALNNVEACLQDEINIKHEIYEEQSKEDIDKIIKEEMDITVTETHLISNKVINTTSTITNPQDGLVQSQTTKTLVMEIHPMGGVNVSLGRMGNPEEILPTFNSEYDQASEYDESFQLNSITGNVLSLEQEAYGLLKADHSTEKRYNCHKCDKSFKKSSYLKAHMRVHTSIENRAMGLIKGLKTRMANMKKKICKDIKEEVKSIGNTFKSNSRLERLENRTRIKEEVKKEGYECTCGEVYKRKIRMLSCLRSHDEYKATDSCFSCISCTKQFKDKNELTLHRKRLHRKRFPCKFCPTDYSTRKELFKHLQIHQKVQLMEYKVISEVVKGKQELKCFMCSKSFLELSELKSHVMDDHKEPYICPHCNGKFVKIIDFGNHTKTYHPEVEGQSVLDVLEAFSKLVQAWKCEECNLQFNEADKFAKHQVEYHSPDLKAKEQFQCTDCRRVFISQKGLTSHKRIHHSTGSTEETESVEKGVMCVECRKICKDMNALTSHMRLHSLDRKYPCKFCDFRFATPEKRKAHAELHTGDMKYVCFICEYQCSSENRLKQHKMSLKHLNMKEFLLTGKPLIEEQSTSKKSDRKSDKKSDEKEKKRKHSSSSSGDERESTCDVCGDKFPSEEDMLKHKQTHPFIEFPNEDTPTRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00457514;
90% Identity: iTF_00160139;
80% Identity: -