Basic Information

Insect: Diaprepes abbreviatus
Gene Symbol: -
Assembly: GCA_034092305.1
Location: JASJET010000087.1:5315456-5341728[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0029 0.41 12.8 1.7 2 23 139 160 138 160 0.97

2 16 9.4e-05 0.013 17.5 2.6 2 23 167 188 167 188 0.97

3 16 0.0047 0.67 12.2 0.4 2 23 196 217 195 217 0.97

4 16 0.00029 0.042 16.0 2.6 1 23 341 363 341 363 0.99

5 16 1.1e-05 0.0016 20.4 8.2 2 23 370 391 370 391 0.98

6 16 0.0006 0.085 15.0 2.8 2 23 408 430 408 430 0.96

7 16 0.00033 0.047 15.8 4.4 1 23 503 525 503 525 0.97

8 16 0.0016 0.23 13.6 1.5 1 23 531 554 531 554 0.95

9 16 2.8e-05 0.0039 19.2 2.5 1 23 559 581 559 581 0.98

10 16 6.2e-06 0.00088 21.2 3.4 1 23 590 612 590 612 0.98

11 16 7.6e-06 0.0011 21.0 1.0 1 23 619 641 619 641 0.93

12 16 2.7e-06 0.00038 22.4 1.6 3 23 653 673 651 673 0.96

13 16 8.6e-05 0.012 17.6 4.5 1 23 679 701 679 701 0.99

14 16 5.3e-05 0.0075 18.3 1.7 1 23 707 729 707 729 0.96

15 16 8.1e-07 0.00011 24.0 0.4 1 23 735 757 735 757 0.99

16 16 0.00051 0.073 15.2 0.1 1 22 763 784 763 787 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0029	0.41	12.8	1.7	2	23	139	160	138	160	0.97
2	16	9.4e-05	0.013	17.5	2.6	2	23	167	188	167	188	0.97
3	16	0.0047	0.67	12.2	0.4	2	23	196	217	195	217	0.97
4	16	0.00029	0.042	16.0	2.6	1	23	341	363	341	363	0.99
5	16	1.1e-05	0.0016	20.4	8.2	2	23	370	391	370	391	0.98
6	16	0.0006	0.085	15.0	2.8	2	23	408	430	408	430	0.96
7	16	0.00033	0.047	15.8	4.4	1	23	503	525	503	525	0.97
8	16	0.0016	0.23	13.6	1.5	1	23	531	554	531	554	0.95
9	16	2.8e-05	0.0039	19.2	2.5	1	23	559	581	559	581	0.98
10	16	6.2e-06	0.00088	21.2	3.4	1	23	590	612	590	612	0.98
11	16	7.6e-06	0.0011	21.0	1.0	1	23	619	641	619	641	0.93
12	16	2.7e-06	0.00038	22.4	1.6	3	23	653	673	651	673	0.96
13	16	8.6e-05	0.012	17.6	4.5	1	23	679	701	679	701	0.99
14	16	5.3e-05	0.0075	18.3	1.7	1	23	707	729	707	729	0.96
15	16	8.1e-07	0.00011	24.0	0.4	1	23	735	757	735	757	0.99
16	16	0.00051	0.073	15.2	0.1	1	22	763	784	763	787	0.91

Sequence Information

Coding Sequence: atGATTCCTGAAGATATTCAGTTAATGATAGACAAAATATGTCGATCTTGCATGTGCGAGAGTGGAGAAATGCATAATGTTTTCGAAAAAATCGTCGGTCCAGCAGACGACACTATGCTTCTTTCGGATATGCTTATGGCTTGTGCCTCAATAGAGgTCATAACAGGCGATGGCTTACCCTACCTACTCTGTAATACTTGTGAGACCAAGCTAAATTTAGCCTTTGAATTCAAGCAACAATGTGAGAAGTCAGACACAGCCTTAAGGGAACTTACTAACCAGCAAGATGGTAAAGCAAATAAGGAGGAGGACATTATAATTCAACCAGATGTACATGAGGTCTTGTTTGATGAGGATGATGAGGATGATTTGCCGTTGGCTAAACGTAAACGTAATGATTCACTTGCCGACTTGACATGCACTTACTGTATGAAAACTCTCACTACCAAAAAGGGTTTAAGAGTACATTTACGTCAACATACTGGTGATGGAATGAGGTATTGTCCGATATGCCCTTCAAAATATACAAGAACTAACCATTTAATGAGGCACATGAAGACCCATGATAGACCTGGAAAAAAGCAGTCATGTAAAATATGTGCTGAAAAGTTTTTTGCATCCGGCGATTTATATAAACATATGAAAATTCACATAGAAGAGGTTGAGAAGAGATCTAAAAAAGAGTCTGAAAAGGAAAAAATTGTGgttgaagttaaaaaagaaaaggaTGATGATACCGTGAAAACAGAAGAACCAAAAGATAGTGAACAGACGATAGAAGAACAGAATGAGAATGAGGAAAAAGATGAAAAACTTGATTTATTAGATATTGTTAAGTCAAAGGAAGATGATTTCATGGACATTCCACTCAGTCAGTTTCCATTcagtgatgatgataatgataatgttgataatgatgatggtgtAGGAAACAACGATGATGATAAAGATGAAGATTTTGTCgtcgaaaaagaaaagaaaaaaagaggaagaccacCTGGAAAGAAGGATGGCACACTTTATGAATGCAAGGAATGCAGCAAAATACTTACAACCTATTGTGGTCTGAGAATACATATGAGAAGACATACAGGGGCGGATCTGGCAAAGTGCAAGCACTGCGATAAATCTTTCACAAAAATGAGTCACCTGAATAGACATCTACGATCCCATGGCATTATAAAAGGAAAGAGCAAGAATAAAGGAGATAAAAAAactAGAGAGTGTGAATTCTGTGAtcgtaaatttaaatataaaaaaagttatgttCATCATATGCAAGTCGAGCATGGTATGTCTGACATTGATAGTGACATTGAAAAGGATAAGGCTGAAGGCAAGGCTAACAATAATGAACAGGCTGAGAATGTAGAAAATGGAGaAACCAACAACGAAAATTGTGAAAACAACGGAGATTCTGTGGACCAAACTATAGAGAAATTAGAACCATCGGACGAGTTAGATTTATCTTTGGATGACCTtatgttaaaaagaaaagttaaGGTTCACACTTGCCATGTGTGCCAGGCAGAGTTCGCCCGTGCTAATCATCTGACTAGACACATGACGCTCCATAGAGCTGTGTTAACACATAAATGTGATAGATGTGATCAGGCATTCTTTACTGAAGAATTGCTTAAACAACATATAGAGCAGCAACATATTAATAAACCCTATGTCTGTACTACGTGTAATAAACAATTTAGTAGAGGTGAACATCTTATAAGGCATTTAAAACTACATCAGGAAGTTACAGAGGAAGGTCAACATAAATGTTCAATTTGCGAAGCCGTATTTTCGAGATCAGATCATTTAGCACGACATACAAAAACACATCTTATGCAGGATAAACGGCATGTGTGTATCGAGTGTGGAAAGGCGTTTAATAGgttagataatttaaaaactcaccaAAGAATACACACTGGACTTAAGGATAACTCAAAATTACATTTATGTGTTTATTGTggtaaagaatttaataattcaaGTAATATGattgtgcATATGAGGAGACATACAGGTGAGAGACCTTATAAATGTAATGAATGTGGCAAAGGTTTTCCAAGATCACACGACCTTAAATGTCACGAAAGAACTCATTCAGGAGAGAAGCCTTATTTGTGTACATTGTGTGGTAAATCATTTAACAAGAGTAACAAATTGctACGACACAGCAGAGTACACACCGGTGAACGTCCTTACGTGTGCAACATATGCTCCAGAGCATTTACTCAATCTAACGACTTGGCATTACATATGCGTAGACATACAGGAGCGAGACCTTATGCGTGTGGTGTTTGTCCAGCTAGATTTATTCAGTCTGGCCAGTTGAAGAATCATAGGAGACAGACGGGTCATTGGATGGAAACTCAACCTGACTTGAAAGGTGGAcacagagTGGAGCCCGTAACGTCGGCAGTTGAACCAATGCCGATAAGGTTTAAAACATTCGGAAAGAACCGAATGGTCAAATTAGAAGAAGGTGTTCAACAAGGCGATCAGCAGTTACTTCAGAATCAGTCTCACCAAGTATTAGATCATCAGCCTCAACTAGCACAATTACAGACTCAGCCGCAAAGAATATTAATGGGCATTATGGGCAACATAAAAATACAAAACGATGGACAACCGTTAATAATTGACAGTAATAAAATAGTGGAACTACCCGGTGGCCAGTTGGGTTTAGTGACTTTACCGACCGTAATACAAGGGGCAGACGGTGAGGAAATCAAATTAAAAACCGAAATTGGTAGTTTTAATTTAACTCAAGTAGAGGACGACTTGGAAAAACACGAGGTAGTTAGTACCTCCAGTACCTTCCATGAAGGTGATTCGGTGGCGTTTACTACAGTACAAACTTCAACGACATATACCTCAGCGGAGAATTTTACCTTTCAAACGTTTAATTAA
Protein Sequence: MIPEDIQLMIDKICRSCMCESGEMHNVFEKIVGPADDTMLLSDMLMACASIEVITGDGLPYLLCNTCETKLNLAFEFKQQCEKSDTALRELTNQQDGKANKEEDIIIQPDVHEVLFDEDDEDDLPLAKRKRNDSLADLTCTYCMKTLTTKKGLRVHLRQHTGDGMRYCPICPSKYTRTNHLMRHMKTHDRPGKKQSCKICAEKFFASGDLYKHMKIHIEEVEKRSKKESEKEKIVVEVKKEKDDDTVKTEEPKDSEQTIEEQNENEEKDEKLDLLDIVKSKEDDFMDIPLSQFPFSDDDNDNVDNDDGVGNNDDDKDEDFVVEKEKKKRGRPPGKKDGTLYECKECSKILTTYCGLRIHMRRHTGADLAKCKHCDKSFTKMSHLNRHLRSHGIIKGKSKNKGDKKTRECEFCDRKFKYKKSYVHHMQVEHGMSDIDSDIEKDKAEGKANNNEQAENVENGETNNENCENNGDSVDQTIEKLEPSDELDLSLDDLMLKRKVKVHTCHVCQAEFARANHLTRHMTLHRAVLTHKCDRCDQAFFTEELLKQHIEQQHINKPYVCTTCNKQFSRGEHLIRHLKLHQEVTEEGQHKCSICEAVFSRSDHLARHTKTHLMQDKRHVCIECGKAFNRLDNLKTHQRIHTGLKDNSKLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCNECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKNHRRQTGHWMETQPDLKGGHRVEPVTSAVEPMPIRFKTFGKNRMVKLEEGVQQGDQQLLQNQSHQVLDHQPQLAQLQTQPQRILMGIMGNIKIQNDGQPLIIDSNKIVELPGGQLGLVTLPTVIQGADGEEIKLKTEIGSFNLTQVEDDLEKHEVVSTSSTFHEGDSVAFTTVQTSTTYTSAENFTFQTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00196558; iTF_00848912; iTF_01188563; iTF_01244439;
90% Identity: -
80% Identity: -