Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987327.1:103731564-103746089[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0098 3.2 11.4 1.8 2 23 140 161 139 161 0.97

2 16 4.5e-05 0.015 18.7 2.1 2 23 168 189 168 189 0.97

3 16 1e-05 0.0033 20.8 0.6 2 23 197 218 196 218 0.97

4 16 0.00034 0.11 16.0 2.6 1 23 348 370 348 370 0.99

5 16 2.1e-05 0.0068 19.8 7.7 3 23 378 398 377 398 0.98

6 16 0.00058 0.19 15.2 3.1 2 23 415 437 415 437 0.96

7 16 0.00038 0.12 15.8 4.4 1 23 505 527 505 527 0.97

8 16 0.0074 2.4 11.7 1.5 1 23 533 556 533 556 0.95

9 16 3.2e-05 0.01 19.2 2.5 1 23 561 583 561 583 0.98

10 16 7.2e-06 0.0023 21.2 3.4 1 23 592 614 592 614 0.98

11 16 8.8e-06 0.0029 21.0 1.0 1 23 621 643 621 643 0.93

12 16 3.1e-06 0.001 22.4 1.6 3 23 655 675 653 675 0.96

13 16 9.9e-05 0.032 17.6 4.5 1 23 681 703 681 703 0.99

14 16 6.1e-05 0.02 18.3 1.7 1 23 709 731 709 731 0.96

15 16 9.3e-07 0.0003 24.0 0.4 1 23 737 759 737 759 0.99

16 16 0.00059 0.19 15.2 0.1 1 22 765 786 765 789 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0098	3.2	11.4	1.8	2	23	140	161	139	161	0.97
2	16	4.5e-05	0.015	18.7	2.1	2	23	168	189	168	189	0.97
3	16	1e-05	0.0033	20.8	0.6	2	23	197	218	196	218	0.97
4	16	0.00034	0.11	16.0	2.6	1	23	348	370	348	370	0.99
5	16	2.1e-05	0.0068	19.8	7.7	3	23	378	398	377	398	0.98
6	16	0.00058	0.19	15.2	3.1	2	23	415	437	415	437	0.96
7	16	0.00038	0.12	15.8	4.4	1	23	505	527	505	527	0.97
8	16	0.0074	2.4	11.7	1.5	1	23	533	556	533	556	0.95
9	16	3.2e-05	0.01	19.2	2.5	1	23	561	583	561	583	0.98
10	16	7.2e-06	0.0023	21.2	3.4	1	23	592	614	592	614	0.98
11	16	8.8e-06	0.0029	21.0	1.0	1	23	621	643	621	643	0.93
12	16	3.1e-06	0.001	22.4	1.6	3	23	655	675	653	675	0.96
13	16	9.9e-05	0.032	17.6	4.5	1	23	681	703	681	703	0.99
14	16	6.1e-05	0.02	18.3	1.7	1	23	709	731	709	731	0.96
15	16	9.3e-07	0.0003	24.0	0.4	1	23	737	759	737	759	0.99
16	16	0.00059	0.19	15.2	0.1	1	22	765	786	765	789	0.91

Sequence Information

Coding Sequence: atGATTCCCGAAGATATTCAATTGATGATAGATAAAATATGTCGCTCCTGCATGTGTGAAAATGAAGACATGCATAATGTCTACGAAAAAACTGCTGGTCCAGCAGACGACACAATGCTTCTTGCTGATATGTTGATGGCTTGTGCCTCTGTAGAGGTTATAACCGGAGATGGCTTACCATACTTACTTTGTAATACCTGTGAGAACAAGTTAAGTTCGGCATTTGAGTTCAAACAGCAATGTGAAAAATCAGATACAGCCTTAAGAGAACTTACTAACCAGCCCGATGACAAAACAAATAAAGAAGAGGATATTATTATTCAGCCAGATTTACATGGAGGTTTGTTTAATgagGAAGATGATGATTTGCCTTTAGCAAAGCGCAAATGTGAAGCAGATGATTCACCTGTTAATTTAACATGCACCTACTGTATGAAAACTCTGTCCACCAGGAAAGGACTAAGATTACATTTGCGTCAACATACTGGTGATGGCATGAGgtATTGTCCAATATGTCCTTTAAAGTACACAAGAACTAACCATTTGATGAGGCACATGAAATCTCACGATAGAACGGGAAAAAAACAAACATGTAAAATATGTGATCAAAGATTTTCTGTATCTGGTGATCTTTATAAGCATATGAAAGTTCATATAGAAGAGGTCAGTGTTGAGAAAAAGTCAAAAAGAGAAtcagaaaaaattataattgaagTTAAAAAGGAAAGAGAGGATGATTCAGTGAATGTTGAAGAAGCTAAGTTAAGTGAAGAAAAAACTGACAACCAAAAAAATGATGAGAATGaagaaaatgatgaagaaattgaggaaaaacttaatttattgggAATTGTTAAGTCAAAGgaATTTGATTCCATGGACATTCCGCTCAGTCAGTTTCCATTcagtgatgatgatgataatgatgttGACAATGATGATGGACAAGGAAtgaatgatgatgataatgatgaagaCTTTGTTGTTGAAAAAGAAAAGAAACGTAGAGGACGACCCCCTGGAAAAAAGGATGGTACACTTTATGAGTGTAAGGAATGCAGCAAAATACTTACTACTTATTGTGGTTTAAGAATACATATGAGAAGGCATACTGGTGCGGATTTGGCGAATTGCAAGCATTGTGATAAGTCATTTACAAAGATGAGTCACCTAAATAGGCATCTACGTTCCCATGgaattattaaaggaaaaaccaAAAGTAAAGGAGATAAAAAGACTAGAGAATGCGAATTCTGTGATCgtaaatttaaatacaaaaaaagttTTGTTCATCATATGCAAGTCGAGCATGGTATGTCGGACATTGACAGTGACGTTGAGAAGACTCCATCGGGTGAGAAAGCAAACAGTGATGATAACATAGAGAATGGAGACACAAATAATGAGAATTATCAGAACAATGGAGAATCTTTGGACCAAACGATGGATAATCTCGATCCAGCTGAGTTCGAAATAAGCATTGACGCCCTGACGAAAAAGAAATTAAAGGTTCATACTTGCCATGTGTGTCAAGCAGAGTTTGCTCGTGCGAATCACCTGACTAGACATATGACGTTACATAGAGCCGTTTTGACACATAAATGCGATAGGTGTGATCAGGCATTTTTCACGGATGAACTGCTTAAACAGCACATAGAACAACAACATATTAACAAACCATATGTGTGTACAACATGTAATAAGCAATTCAGTAGAGGGGAACACCTTATAAGGCATTTGAAACTTCACCAGGAAGTGACTGATCAAGGTCAGCATAAATGTTCCATTTGTGAAGCTGTATTTTCGAGGTCAGACCATTTAGCCAGACATACAAAGACTCATCTTATGCAGGACAAAAGGCATGTGTGTATAGAGTGTGGAAAGGCTTTTAATAGGTTAGATAATTTGAAAACTCACCAAAGAATCCACACGGGGCTCAAGGATAATTCCAAGTTACATTTATGTGTTTATTGCGGGAAAGAATTTAATAATTCAAGTAATATGatcgTGCATATGAGACGACATACCGGCGAAAGGCCATACAAATGTAATGAATGTGGCAAAGGATTTCCCAGGTCACATGATCTTAAATGTCACGAAAGAACGCATTCAGGAGAGAAACCCTATTTGTGTACTTTATGTGGAAAGTCATTTAACAAGAGTAACAAattgCTGCGGCACAGCCGAGTACACACGGGTGAGCGACCGTACGTTTGCAACATATGTTCCAGAGCCTTTACCCAATCGAACGACTTGGCCTTGCACATGCGCAGACATACGGGCGCGCGGCCCTACGCCTGCGGCGTATGTCCTGCTAGATTTATCCAGTCCGGTCAATTGAAGAATCACAGGAGACAAACAGGACATTGGATGGAGACGCAGCCAGATTTGAAGGGAGGGCACAGGGTGGAACCTGTAACGTCTGCTGTGGAGCCAATGCCAATAAGATTTAAAACGTTTGGCAAGAGTCGATTGGTCAAAGTAGAAGATGGAGTGGTGATACAAAGTGATCAGCAGCAACTTCAAAACCAGTCCCAACAAATAGTAGATCATCAGCCGGATTTAGAACAGTTGCAGGTTCAACCGCAAAGAATACTAATGGGCATAATGGGTAAcattaaaatacaaaatgacgTACAACCGTTATTAATCGATACAAATAAAATAGTGGAGCTGTCGGGTGGACAGTTGGGTTTAGTGACGTTACCTACGGTAATTCAGGGAGCTGACGGTGAAGAGATAAAGTTAAAAACCGAGATAGGAAGTTTTAATATATCCCAAGTGGAAGAGGACCTGGACAAACATGAGGTAGTTAGTACCTCCAGTACCTTCCATGAAGGTGATACGGTGACGTTTTCTACAGTACAAACTTCGACTACGTATACCTCAGCAGAGAATTTTACCTTTCAAACGTTTAATTAG
Protein Sequence: MIPEDIQLMIDKICRSCMCENEDMHNVYEKTAGPADDTMLLADMLMACASVEVITGDGLPYLLCNTCENKLSSAFEFKQQCEKSDTALRELTNQPDDKTNKEEDIIIQPDLHGGLFNEEDDDLPLAKRKCEADDSPVNLTCTYCMKTLSTRKGLRLHLRQHTGDGMRYCPICPLKYTRTNHLMRHMKSHDRTGKKQTCKICDQRFSVSGDLYKHMKVHIEEVSVEKKSKRESEKIIIEVKKEREDDSVNVEEAKLSEEKTDNQKNDENEENDEEIEEKLNLLGIVKSKEFDSMDIPLSQFPFSDDDDNDVDNDDGQGMNDDDNDEDFVVEKEKKRRGRPPGKKDGTLYECKECSKILTTYCGLRIHMRRHTGADLANCKHCDKSFTKMSHLNRHLRSHGIIKGKTKSKGDKKTRECEFCDRKFKYKKSFVHHMQVEHGMSDIDSDVEKTPSGEKANSDDNIENGDTNNENYQNNGESLDQTMDNLDPAEFEISIDALTKKKLKVHTCHVCQAEFARANHLTRHMTLHRAVLTHKCDRCDQAFFTDELLKQHIEQQHINKPYVCTTCNKQFSRGEHLIRHLKLHQEVTDQGQHKCSICEAVFSRSDHLARHTKTHLMQDKRHVCIECGKAFNRLDNLKTHQRIHTGLKDNSKLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCNECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKNHRRQTGHWMETQPDLKGGHRVEPVTSAVEPMPIRFKTFGKSRLVKVEDGVVIQSDQQQLQNQSQQIVDHQPDLEQLQVQPQRILMGIMGNIKIQNDVQPLLIDTNKIVELSGGQLGLVTLPTVIQGADGEEIKLKTEIGSFNISQVEEDLDKHEVVSTSSTFHEGDTVTFSTVQTSTTYTSAENFTFQTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00444380;
90% Identity: -
80% Identity: -