Basic Information

Insect: Philopedon plagiatum
Gene Symbol: -
Assembly: GCA_963971165.1
Location: OZ020189.1:137736343-137755160[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00094 0.18 14.7 1.4 2 23 141 162 140 162 0.97

2 16 0.00012 0.023 17.5 2.6 2 23 169 190 169 190 0.97

3 16 0.00033 0.063 16.1 0.4 2 23 198 219 198 219 0.97

4 16 0.00037 0.071 16.0 2.6 1 23 344 366 344 366 0.99

5 16 0.00011 0.022 17.6 5.9 2 23 373 398 373 398 0.91

6 16 0.00063 0.12 15.2 3.1 2 23 415 437 415 437 0.96

7 16 0.00041 0.08 15.8 4.4 1 23 508 530 508 530 0.97

8 16 0.0025 0.49 13.3 0.5 2 23 537 559 536 559 0.94

9 16 3.5e-05 0.0067 19.2 2.5 1 23 564 586 564 586 0.98

10 16 2e-05 0.0039 19.9 4.1 1 23 595 617 595 617 0.98

11 16 9.5e-06 0.0018 21.0 1.0 1 23 624 646 624 646 0.93

12 16 3.4e-06 0.00066 22.4 1.6 3 23 658 678 656 678 0.96

13 16 0.00011 0.021 17.6 4.5 1 23 684 706 684 706 0.99

14 16 6.6e-05 0.013 18.3 1.7 1 23 712 734 712 734 0.96

15 16 1e-06 0.0002 24.0 0.4 1 23 740 762 740 762 0.99

16 16 0.00064 0.12 15.2 0.1 1 22 768 789 768 792 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00094	0.18	14.7	1.4	2	23	141	162	140	162	0.97
2	16	0.00012	0.023	17.5	2.6	2	23	169	190	169	190	0.97
3	16	0.00033	0.063	16.1	0.4	2	23	198	219	198	219	0.97
4	16	0.00037	0.071	16.0	2.6	1	23	344	366	344	366	0.99
5	16	0.00011	0.022	17.6	5.9	2	23	373	398	373	398	0.91
6	16	0.00063	0.12	15.2	3.1	2	23	415	437	415	437	0.96
7	16	0.00041	0.08	15.8	4.4	1	23	508	530	508	530	0.97
8	16	0.0025	0.49	13.3	0.5	2	23	537	559	536	559	0.94
9	16	3.5e-05	0.0067	19.2	2.5	1	23	564	586	564	586	0.98
10	16	2e-05	0.0039	19.9	4.1	1	23	595	617	595	617	0.98
11	16	9.5e-06	0.0018	21.0	1.0	1	23	624	646	624	646	0.93
12	16	3.4e-06	0.00066	22.4	1.6	3	23	658	678	656	678	0.96
13	16	0.00011	0.021	17.6	4.5	1	23	684	706	684	706	0.99
14	16	6.6e-05	0.013	18.3	1.7	1	23	712	734	712	734	0.96
15	16	1e-06	0.0002	24.0	0.4	1	23	740	762	740	762	0.99
16	16	0.00064	0.12	15.2	0.1	1	22	768	789	768	792	0.91

Sequence Information

Coding Sequence: atgaTTCCCGAAGATATTCAGTTAATGATAGACAAAATATGTAGATCATGCATGTGTGAAAGTGAAGAAATGCATAATGTCTTCGAAAAAACTGCCGGTCCAGCAGAAGACACAATGCTTCTTTCGGATATGCTTATGGCCTGTGCCGCTGTagaaGTTATGACGGGGGATGGCTTACCTTACTTACTTTGCAATACCTGTGAGAGCAAGTTAAGTTCAGCCTTTGAGTTCAAGCAGCAGTGTGAAAGGTCAGATTCAGCATTAAGGGAGCTGACTGATCAGCAGGGAGACAAGATAAATAAGGAAGAGGACATCATTATTCAGCCAGATGTCCATGAGGGTTTATTCGATGAGGACGACGAAGATGATTTGCCATTGGCTAAGCGTAAACGTACCGCTGGTGATTCACCTGCCGACTTAACGTGCACTTATTGTTTGAAAACCCTTTCTACTAGGAAGGGTTTGAGAGTGCATTTACGTCAACATACTGGTGATGGAATGAGGTATTGCCCAATATGTCCTTCAAAGTACACACGGACCAACCATCTAATGAGACATATGAAAACTCACGACAGATCTGGCAAAAAACCATCATGTAAAATATGTGCTCAAAAATTTTCCGTATCCGGCGATCTTTACAAGCACATGAAAATTCACATAGAGGAGGTTGAGAAAAAGGCTAAAAAGGAAATgcaaaaggaaaaaattgtaattgaaGTCAAAAAGGAAAAAGATGATGATACAGTGATAACGGAAGAACTAAATTTGAATGAACAAAAAGAAGAAGGAGAGACTAAAACTGAAGAAGAAAACGATGCAAAGAATGATTTTCTAGAAATTGTTAGATCAAAGGACATTGATGATTCCATGGACATTCCACTCAGTCAATTTCCATTCagtgatgatgatgataatgatgtTGACATTGACGATGGTTTGGGTAATGATGATGACAAAGATGAAGATTTTGTCGTCGAGAAAGAGAAGAAGCGAAGGGGAAGACCGCCTGGAAAGAAGGACGGCACACTGTATGAGTGCAAAGAATGCAGTAAAATACTTACCACTTATTGTGGTTTAAGAATTCATATGAGAAGGCATACGGGTGCGGACTTGGCGAAGTGCAAGGTAGTATCTAAACATTGCGATAAGTCGTTTACAAAAATGAGTCACCTAAATAGGCATCTGCGTTCTCATGGAATTATCAAAGGAAAGAGTAAAAGTAAAGGAGATAAAAAGACGAGAGAATGTGAGTTCTGTGAtcgtaaatttaaatataagaaAAGCTTTGTTCACCATATGCAGGTTGAACATGGCATGTCAGATATTGATAGTGACAGTGAGAAGACTAAATCCGGTGAAAAAGCGAACAATAATGTAAAGGAAGAGGATATAGAAAATGgagatgccAATAATGAAAATCGCCAGGAGAACGGAGAATCTTTAGACCAAGAAAAATTAGAGCCGTCTGACGAATTAGAACTGAATATAGACGACTTGACGTTAAagagaaaagtaaaaattcatACTTGCCACGTTTGCCAGGCGGAGTTCGCACGTGCCAATCATCTAACTAGGCATATGACATTACATAGAGCCGTGTTAACAAATAAGTGTGATAGATGTGACCAGGCTTTCTTTACTGAAGACCTGCTTAAACAACACATAGAACAGCAACATATTAATAAGCCCTATGTCTGTACTACATGCAACAAACAGTTTAGTAGAGGTGAACATCTTATAAGACATTTAAAACTTCACCAAGAAGTTACAGATGAAGGCGAACATAAATGTTCAATTTGTGAAGCTATGTTTACaagaTCAGATCATTTAGCAAGACACACGAAAACCCACCTTATGCAAGATAAAAGGCATGTATGTATCGAGTGTGGAAAAGCATTTAATCGACTAGATAATCTGAAAACTCACCAAAGAATACACACCGGACTTAAGGATAATTCAAAATTACATTTGTGTGTTTACTGTGGTAAAGAATTTAATAATTCAAGCAATATGATTGTTCATATGCGACGACATACTGGCGAAAGGCCGTACAAATGCAACGAATGTGGCAAAGGTTTTCCAAGATCGCATGACCTTAAATGCCACGAGAGAACACATTCGGGGGAAAAGCCTTATTTGTGTACTTTGTGTGGAAAGTCGTTTAACAAGAGCAATAAGTTGCTGCGTCATAGCAGAGTGCATACTGGTGAACGTCCTTACGTCTGCAATATATGCTCGAGAGCCTTTACCCAATCCAACGACTTAGCACTGCACATGCGGAGACATACGGGAGCACGGCCCTACGCTTGCGGCGTGTGTCCGGCTAGATTTATTCAGTCGGGTCAGTTGAAGAATCACAGGAGACAGTCGGGTCATTGGATGGAGACACAGCCTGATTTGAAAGGAGGACACAGggtgGAACCTGTCACGTCAGCAGTGGAACCTATACCAATAAGATTCAAAACATTCGGGAAGAGTAGACTGGTCAAATTAGAAGAAGGAATTCAGCAAGGCGATCAGCAGCAACACCAGAACCAATCCCAACAAGACATAGATAATCACCAGAGTCAAATGGCGCAGTTGCAGGCGCAACCTCAGAGAATACTGATGGGAATTATGGgtaatattaaaatacaaaacgaCGGGCAACCGTTAATTATTGACAGTAATAAAATAGTGGAACTTCCCGGTGGCCAGTTGGGTCTAGTGACTTTACCTACGGTAATTCAGGGTGCTGACGGTGAAGAAATTAAACTGAAAACGGAAATAGGTAGTTATAATATATCGCAAGTGGAGGACGACTTGGATAAACACGAAGTAGTTAGTACCTCGAGTACCTTCCATGAAGGTGATTCGGTGGCGTTTTCTACAGTACAAACTTCAACGACTTATACCTCAGCAGAGAACTTTACTTTTCAAACGTTTAATTAA
Protein Sequence: MIPEDIQLMIDKICRSCMCESEEMHNVFEKTAGPAEDTMLLSDMLMACAAVEVMTGDGLPYLLCNTCESKLSSAFEFKQQCERSDSALRELTDQQGDKINKEEDIIIQPDVHEGLFDEDDEDDLPLAKRKRTAGDSPADLTCTYCLKTLSTRKGLRVHLRQHTGDGMRYCPICPSKYTRTNHLMRHMKTHDRSGKKPSCKICAQKFSVSGDLYKHMKIHIEEVEKKAKKEMQKEKIVIEVKKEKDDDTVITEELNLNEQKEEGETKTEEENDAKNDFLEIVRSKDIDDSMDIPLSQFPFSDDDDNDVDIDDGLGNDDDKDEDFVVEKEKKRRGRPPGKKDGTLYECKECSKILTTYCGLRIHMRRHTGADLAKCKVVSKHCDKSFTKMSHLNRHLRSHGIIKGKSKSKGDKKTRECEFCDRKFKYKKSFVHHMQVEHGMSDIDSDSEKTKSGEKANNNVKEEDIENGDANNENRQENGESLDQEKLEPSDELELNIDDLTLKRKVKIHTCHVCQAEFARANHLTRHMTLHRAVLTNKCDRCDQAFFTEDLLKQHIEQQHINKPYVCTTCNKQFSRGEHLIRHLKLHQEVTDEGEHKCSICEAMFTRSDHLARHTKTHLMQDKRHVCIECGKAFNRLDNLKTHQRIHTGLKDNSKLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCNECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKNHRRQSGHWMETQPDLKGGHRVEPVTSAVEPIPIRFKTFGKSRLVKLEEGIQQGDQQQHQNQSQQDIDNHQSQMAQLQAQPQRILMGIMGNIKIQNDGQPLIIDSNKIVELPGGQLGLVTLPTVIQGADGEEIKLKTEIGSYNISQVEDDLDKHEVVSTSSTFHEGDSVAFSTVQTSTTYTSAENFTFQTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00444380;
90% Identity: -
80% Identity: -