Basic Information

Insect: Kuschelorhynchus macadamiae
Gene Symbol: -
Assembly: GCA_030620095.1
Location: JAUTXW010000101.1:888648-917407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00018 0.045 17.1 0.9 2 23 139 160 138 160 0.97

2 16 0.00013 0.034 17.5 2.6 2 23 167 188 167 188 0.97

3 16 0.00015 0.037 17.4 2.4 1 23 195 217 195 217 0.98

4 16 1.6e-05 0.004 20.4 0.8 1 23 357 379 357 379 0.99

5 16 9.5e-06 0.0024 21.1 8.9 2 23 386 407 386 407 0.98

6 16 0.00071 0.18 15.2 3.1 2 23 424 446 424 446 0.96

7 16 0.0019 0.48 13.9 7.1 1 23 522 544 522 544 0.97

8 16 0.0023 0.58 13.6 1.5 1 23 550 573 550 573 0.95

9 16 1.4e-05 0.0035 20.6 1.6 1 23 578 600 578 600 0.98

10 16 1e-05 0.0025 21.0 3.5 1 23 609 631 609 631 0.98

11 16 1.1e-05 0.0027 20.9 1.0 1 23 638 660 638 660 0.93

12 16 3.8e-06 0.00097 22.3 1.6 3 23 672 692 670 692 0.96

13 16 0.00012 0.031 17.6 4.5 1 23 698 720 698 720 0.99

14 16 7.5e-05 0.019 18.3 1.7 1 23 726 748 726 748 0.96

15 16 1.1e-06 0.00029 24.0 0.4 1 23 754 776 754 776 0.99

16 16 0.00073 0.18 15.2 0.1 1 22 782 803 782 806 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00018	0.045	17.1	0.9	2	23	139	160	138	160	0.97
2	16	0.00013	0.034	17.5	2.6	2	23	167	188	167	188	0.97
3	16	0.00015	0.037	17.4	2.4	1	23	195	217	195	217	0.98
4	16	1.6e-05	0.004	20.4	0.8	1	23	357	379	357	379	0.99
5	16	9.5e-06	0.0024	21.1	8.9	2	23	386	407	386	407	0.98
6	16	0.00071	0.18	15.2	3.1	2	23	424	446	424	446	0.96
7	16	0.0019	0.48	13.9	7.1	1	23	522	544	522	544	0.97
8	16	0.0023	0.58	13.6	1.5	1	23	550	573	550	573	0.95
9	16	1.4e-05	0.0035	20.6	1.6	1	23	578	600	578	600	0.98
10	16	1e-05	0.0025	21.0	3.5	1	23	609	631	609	631	0.98
11	16	1.1e-05	0.0027	20.9	1.0	1	23	638	660	638	660	0.93
12	16	3.8e-06	0.00097	22.3	1.6	3	23	672	692	670	692	0.96
13	16	0.00012	0.031	17.6	4.5	1	23	698	720	698	720	0.99
14	16	7.5e-05	0.019	18.3	1.7	1	23	726	748	726	748	0.96
15	16	1.1e-06	0.00029	24.0	0.4	1	23	754	776	754	776	0.99
16	16	0.00073	0.18	15.2	0.1	1	22	782	803	782	806	0.91

Sequence Information

Coding Sequence: ATGATTCCAGAGGATATTCAGCTGATGATAGACAAAATATGTCGGTCCTGTATGTGTGAGAGTGGTGATATGCGTAATGTTTTCGAGAAAACTGCGGGTTCTGCCGACGATGCTTTACTTCTCTCAGATATGCTTATGGCCTGTGCTGCGGTGGAGATTGCGACAGGGGATGGTTTACCTTACTTGCTTTGTAATACTTGTGAGTCAAAATTGAATACAGCATATGAATTCAAACAACAATGTGAAAAATCAGATGTTGCTCTAAGGGAACTTACCAACCAACCAGATAGCAAATCCAGTAAAGAAGAGGCCATTATTATACAACCTGATGTTCACGAGGAGCTGTTTGATGAGGATGATGAAGATGACTTGCCACTAGCCAAGAGGAAACGCAGTATTTCACCTAGTGAGTTAACATGCACTTATTGTCTGAAAACATTCTCTGCAAGGAGAGGCTTAAGGGTGCACATACGTTCACATACAGGGGATGGAATGAGATATTGTCCGATATGTCCCTCAAAGTATACTCGCACAAATCATTTAATGAGACATATGAAAACTCATGATAGACCAGGGAAGAAACACACCTGCAAAATATGTGCTGTAAAGTTTAACCAATCAGGTGACCTGTTTAAACATATGAAAAGTCACATCGAAGAGGTTGAGAAGAAGTCCAAAAAAGAAGCGGAAAAAGAAAAAGATGAAGTTGAAGTCAAGAAAGAAAAGGAAGAGGATGAGATCAAGGAGGAAGTCGAAAAAGAAAAGGAGAGAGAGATAGAGAGCACAAATGAACAACCAATAATTGTCGAAAACGTTGGTGACGATGGCGAAAAAGAGAAGATAGAAGAAGAGAAAGATGAGAAAATAGAATTAGATGATCTAGTTTCAaagGATACACAGGATGACGATTCAATGGACGTACCTCTTAGTCAGTTTCCTTTTAGCGACGATGACAATGACAATAACGCGGATGACGGCATTACAAACGACGATGCAAACGACGAAGATTTTGTAGTCGCAAAAGAAAAGAAACCTCGGGGGAGGCCACCTAAAAAAGACGTCACTCTATACGAGTGTAAAGAGTGCAACAAGATTCTTACAACTTATAGTGGTTTGAAAGTGCATCTCAGACGGCATACTGGAGCTGATTTAGCAAAATgcaagCATTGTGAGAAATCTTTCACGAAGAAAAGTCATCTAAATAGACATCTCCGTTCTCATGGAATTATTCATGGAAAGACCAAAATTAAAGGAGATAAAAAGACCAGGGAGTGTGAATTCTGTGATcgcaaatttaaatataagaagAGCTTTGTTCATCACATGCAAGTCGAGCATGGTATGTCGGATGTTGAAAGTGAAACTGGTGATAAGATTGAAGAACTTGAAACCATTGCAAATAACAATGAAAACAGAAATAATGGCGAGAATGGAGAAATCCCTATTGGAAACTTTGAAACTAATGGCGAATCAGTGGATGAAATGTTGGAGAAAATGGAACCGGTGGACGACTTGGATTTAAGCGCATTGGATGACATAAATCTGAAACGAAAAATGAAGGTTCACACTTGCCACGTATGTCACGCCCAATTCGCCAGAGCTAACCACCTGACTAGACATATGACCCTGCACAGGGCCGTACTAACCCATAAATGTGATAGGTGTGATCAGGCTTTCTTCACTGAGGAGTTGCTCAAGCAACATATAGAACAACAGCATATTAATAAACCATATGTGTGCACTACTTGTAATAAGCCATTTAGTAGAGGTGAACATCTCATTAGACATTTAAAACTTCACCAGGAAGTTACAGATGAAGGACAGCACAAATGTTCCATATGCGAAGCGGTATTTACAAGATCTGACCACCTTGCCAGACATACAAAAACACATTTGATGCAAGACAAGAGGCATGTTTGCATCGAGTGTGGTAAAGCATTTAATAGGTTAGACAATCTAAAGACTCACCAAAGAATACATACAGGACTTAAGGATAACTCAAAGCTGCATTTGTGTGTGTACTGTGGCAAAGAATTTAATAATTCAAGTAATATGATTGTTCACATGAGGCGACACACAGGAGAACGACCATACAAATGCAACGAGTGCGGTAAAGGTTTCCCGAGGTCGCACGACCTCAAATGCCACGAACGAACGCATTCAGGAGAAAAGCCTTATTTATGTACCCTGTGTGGAAAATCATTCAATAAGAGTAATAAATTGtTAAGGCACAGTAGGGTACACACAGGTGAACGTCCCTATGTATGTAACATCTGTTCTCGTGCCTTCACCCAGTCAAATGATTTAGCCCTGCATATGCGTAGACATACCGGCGCCCGCCCCTATGCCTGTGGAGTATGTCCTGCGCGGTTTATCCAATCTGGTCAACTGAAAAATCACAGGCGGCAGACTGGCCATTGGATGGAAACGCAACCCGATTTGAAGGGAGGTCACAGAGTGGAACCTGTGACCTCAGCAGTAGAACCGATGCCCATTAGGTTCAAAACGTTCGGCAAGAACAGGATGGTCAAGGTAGAAGATCAACAGGGAGAGTCCATGGGCGATAATCAGCAACAGCTGCAACTCCAACAGCCGCTTCAAAGGTTAGATGAGCAACCGGAGTTGGCTCAGCTTCAACAACCTCAGAGAATTCTGATGGGCATCATGGGCAACATAAAGTTGCAAGGCGACGGACAACCGTTAATAATTGACAGTAATAAAATAGTGGAATTGCCAGGTGGACAATTAGGCTTAGTGACTCTACCTACGGTAATACAAGGTGCGGACGGTGAAGAAATTAAACTAAAGACGGAAATAGGTAGTTTTAATTTGGCCCAAGTCGACGATGACTTGGAGAAACACGAAGTAGTTAGCACTTCTAGTACCTTCCATGAAGGCGATACTGTCGCGTATTCCACAGTACAAACTACAACAACATATACCTCAGCTGAGAACTTTACTTTTCAGACTTTCAACTAG
Protein Sequence: MIPEDIQLMIDKICRSCMCESGDMRNVFEKTAGSADDALLLSDMLMACAAVEIATGDGLPYLLCNTCESKLNTAYEFKQQCEKSDVALRELTNQPDSKSSKEEAIIIQPDVHEELFDEDDEDDLPLAKRKRSISPSELTCTYCLKTFSARRGLRVHIRSHTGDGMRYCPICPSKYTRTNHLMRHMKTHDRPGKKHTCKICAVKFNQSGDLFKHMKSHIEEVEKKSKKEAEKEKDEVEVKKEKEEDEIKEEVEKEKEREIESTNEQPIIVENVGDDGEKEKIEEEKDEKIELDDLVSKDTQDDDSMDVPLSQFPFSDDDNDNNADDGITNDDANDEDFVVAKEKKPRGRPPKKDVTLYECKECNKILTTYSGLKVHLRRHTGADLAKCKHCEKSFTKKSHLNRHLRSHGIIHGKTKIKGDKKTRECEFCDRKFKYKKSFVHHMQVEHGMSDVESETGDKIEELETIANNNENRNNGENGEIPIGNFETNGESVDEMLEKMEPVDDLDLSALDDINLKRKMKVHTCHVCHAQFARANHLTRHMTLHRAVLTHKCDRCDQAFFTEELLKQHIEQQHINKPYVCTTCNKPFSRGEHLIRHLKLHQEVTDEGQHKCSICEAVFTRSDHLARHTKTHLMQDKRHVCIECGKAFNRLDNLKTHQRIHTGLKDNSKLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCNECGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHSRVHTGERPYVCNICSRAFTQSNDLALHMRRHTGARPYACGVCPARFIQSGQLKNHRRQTGHWMETQPDLKGGHRVEPVTSAVEPMPIRFKTFGKNRMVKVEDQQGESMGDNQQQLQLQQPLQRLDEQPELAQLQQPQRILMGIMGNIKLQGDGQPLIIDSNKIVELPGGQLGLVTLPTVIQGADGEEIKLKTEIGSFNLAQVDDDLEKHEVVSTSSTFHEGDTVAYSTVQTTTTYTSAENFTFQTFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00444380;
90% Identity: -
80% Identity: -