Dabb036674.1
Basic Information
- Insect
- Diaprepes abbreviatus
- Gene Symbol
- bab1
- Assembly
- GCA_034092305.1
- Location
- JASJET010000141.1:7040818-7045107[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-12 2.8e-10 41.4 0.1 3 45 361 403 359 403 0.92 2 2 1.2 3e+02 2.9 0.2 6 18 469 482 466 487 0.85
Sequence Information
- Coding Sequence
- ATGACCCAGTCGCAACAATACTGTCTGCGATGGAACAATCATCGATCAAATCTTTTGACCGTTTTTGATGAACTTCTCCAAAATGAAGCATTTACAGACGTCACAATCGCCTGTGATGGGGGGAATTCCATCAAATGCCACAGAATGGTATTAGCTGCTTGCTCGCCATATTTTCAGAACCTCTTCACAGAACTACCATGCACGCATCCTGTGGTGGTATTGAAAGACGTAAGGTACTGTGAAATCAAAGCTATTTTAGAGTACATGTATAGAGGAGAAGTAAATGTAGCACAAGACCAATTAGCTGCTTTACTGAAGGTTGCAGAAGCATTAAAAGTGAAAGGATTGGTGGAAGAAAATagATCATGTAAAAGTCCTAGAGAAGAACCACCACCAGTTGAGCAACCTCCAGCAATCCCAACATCAAATTCCATTGTCCCAAACCCCGTCCACAACAGTAATAGGATCAGTTCACCGCCTCATTCCACAAATGCATTATATAAAAACCCTTACAGTTCCTACGAAAGAAAGCCATCTAGTGACCACAATGCCCGGATGAATTTACCAATCTGGGCTGTACCCGGACTACCATTACCCCCACACACTGCATCGGTACCAAGCCAAACGCACCCTCATGCAGCAGCAACAGCTGCTGCCGCCATGTTAAATAGCGCATATGAAGCTGTAAGCTCAGATATGTCTCCacttaaaagaaaaaagttaagcAGTCTTCTAATGCAACGAGATACCCCAATCTTAAGAACGGTGTTGGGGCAGGGGCAAGCTGATTCGCCACAACCTGTCAGTTTGGTCTGTCATCCTGATAGCGGGGACCTGTCTGGGAGTGAAGATAGAATGGTAAAACATATGAAAAATGAGCCTTCTGAAGATGCTCAATCGCCGTACACAGACTTCGCGGAGCGAATGAATGACGAAGAAGAGGAAAAATCAAAATTAGCTATTCCCTCTTCCTCCCCTCAGTCATTTTCGCACGACAATCGAACAAGTGTAACATCTGGAATTGCTTGCTATGTTCCATCGCGGAAACAAGAATGGAAAAGATATAAACAATACACTAGGAATGAAATAATGTCTGCCATTGAAGCAGTTAAAAACGGGATGTCAGCACTGCAGGCAGCCAGAAAATATGGTGTTCCTTCCAGAACCTTATatgacaaagtaaaaaaaatgggaATCACTACAAGTAGGCCATTTAAAAGAGGAAACAATGGTAGTTCTGCATGTTTCCCCTATAGTTCTGGATCTCAATATGGAGGTCACTTATCAGAAAGCGatgaaaatattaacaacaattcAGCGCTTCTAGAAGCGAGTACGTTCCTTCAACATGCGTTAGATAGCAGGGGTGGTGACGAAAGAGAGGCCCTTGCTGCCATGGCTGCCGCTGCTGCAGTTCATGCAGTTGCCTCTGGACATTCCACCAGTCCGAATAACTTAGGGCAAGCGCGTAGTCCCAGTCCTAGCCCAACAATGTTTAAATACATGAGACATAATAGTCTTACTCCTTCTCCAGCTCCAGGAAGCGACCACAATCATAGCGATCAAACGAATGGAAGCTCAGAAAGAGATCGAGAAGAGGAGGAAGATCAAGTTGAGGATCTTTCGATTAATAGAAAACCAGCTATGGAATCGCGGGTTATCATGCCTCCGATGAACCAAATGTCTACCATAATAAAAAAGGAAGAAATGTTAATTGATACTTTCAAGGGAGATGTTAGGCGAGAAATGCGTGTGGAAGAAGCTGACTAG
- Protein Sequence
- MTQSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTIACDGGNSIKCHRMVLAACSPYFQNLFTELPCTHPVVVLKDVRYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSCKSPREEPPPVEQPPAIPTSNSIVPNPVHNSNRISSPPHSTNALYKNPYSSYERKPSSDHNARMNLPIWAVPGLPLPPHTASVPSQTHPHAAATAAAAMLNSAYEAVSSDMSPLKRKKLSSLLMQRDTPILRTVLGQGQADSPQPVSLVCHPDSGDLSGSEDRMVKHMKNEPSEDAQSPYTDFAERMNDEEEEKSKLAIPSSSPQSFSHDNRTSVTSGIACYVPSRKQEWKRYKQYTRNEIMSAIEAVKNGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFKRGNNGSSACFPYSSGSQYGGHLSESDENINNNSALLEASTFLQHALDSRGGDEREALAAMAAAAAVHAVASGHSTSPNNLGQARSPSPSPTMFKYMRHNSLTPSPAPGSDHNHSDQTNGSSERDREEEEDQVEDLSINRKPAMESRVIMPPMNQMSTIIKKEEMLIDTFKGDVRREMRVEEAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00444257; iTF_01239273; iTF_01238480; iTF_01240028; iTF_01240956; iTF_00196426; iTF_00195879; iTF_01241760; iTF_01244203;
- 80% Identity
- iTF_00444257;