Ppte044321.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- bab1
- Assembly
- GCA_963969555.1
- Location
- OZ018379.1:20590567-20592943[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-12 3.9e-10 41.4 0.1 3 45 362 404 360 404 0.92 2 2 3.3 4.2e+02 2.9 0.2 6 18 470 483 467 488 0.85
Sequence Information
- Coding Sequence
- ATGACTCAATCGCAGCAATACTGTCTGCGATGGAACAATCATCGGTCCAACCTGCTGACCGTCTTCGACGAACTGCTCCAGAATGAAGCCTTCACGGACGTCACGATAGCGTGTGATGGTGGAAGTTCAATTAAATGCCATAGAATGGTTTTAGCAGCTTGCTCGCCATATTTTCAGAACCTTTTCACGGAACTACCATGTAAACATCCAGTAGTGGTACTAAAAGACGTAAGATACTGTGAAATTAAAGCTATTCTCGAATATATGTACAGGGGAGAAGTAAACGTTGCTCAGGATCAATTAGCTGCACTGTTGAAGGTTGCAGAAGCACTGAAAGTTAAAGGGTTGGTGGAAGAAAACAGATCTTGTAGAAGCCCCATTCGAGAAGAACCACCACCGCCGATAGATCAAGTGCCTCCGATTCCAACGTCAAATTCCATCGTACCGAATCCCGTCCATAGCAGCAATAGGATAAGTCCGCCGCCCCATTCTACGAATTCGATGTATAAATCCCCCTATAGTTCATACGAGAGGAAATCACATAATGACCACAATCCCAGAATGAATTTACCCATTTGGGCCGTGCCTGGGTTACCATTACCTCCTCACACTGCATCGGTTCCAAACCAGACGCATCCCCATGCAGCAGCAACCGCCGCAGCCGCCATGTTAAGTAGCGCATATGAAGCAGTAAGCTCAGATATGTCTCCACTAAAAAGGAAAAAACTAAGCAGCCTCTTGATGCAACGGGACACCCCGATCTTGAGGACGGTGTTAGGCCAAGGGCAAACGGACTCCTCACAACCTGTTAGTTTAGTGTGCCATCCTGATAACGCAGATCTCTCTGGAAGTGAAGAAAGAATGGTGAAACATATGAAAAACGAGCCTTCTGAAGACGCCCAATCCCCGTACACCGACTTTACAGAGCGTATGAATGACGAGGaagaaaaatccaaattagCCATTCCCTCTTCCTCCCCCCAATCTTATACCCATGACATTCGAACAACCGTAACATCTGGAATTGCTACGTACGTTCCTTCCCAGAAACCGGAATGGAAGAGATATAAGCAATATACCAGGAATGACATTATGTCTGCCATTGAGGCGGTGAAGAACGGAATGTCCGCCCTGCAAGCGGCCAGAAAGTATGGTGTTCCTTCTAGAACTCTTTATGATAAGGTTAAGAAAATGGGAATTACAACAAGTAGACCATTTAAAAGAGGAAACAATGGTAGCTCAGCATGTTTCCCTTATAGTTCTGGTTCTCCATATGGGGGTCATCTATCTGAAAGCGATGAAAACATTAACAACAATTCGGCGCTTTTGGAAGCAAGTACGTTCCTTCAGCATGCTTTGGATAGTAGGGGTGGTGACGAAAGAGAAGCCCTAGCTGCTATGGCGGCTGCAGCTGCTGTCCATGCTGTTGCATCTGGACACTCTACTAGTCCCAATAACTTGGGGCAAGCACGTAGCCCTAGCCCCAGTCCTACAATGCTCAAGTACATGAGGCACAGTAGTCTTACTCCTTCTCCAGCCCCGGGAAGCGATCATCACCATAGCGACCAAACGAATGGAAGCTCCGAAAGGGACCGAGAGGAGGAGGAAGATCAAGTCGAGGACCTGTCGATAAATAGAAAACAAGCTATCGAATCGCGGGTTATTATGCCACCAATGAACCAAATGTCCACCATcataaaaaaggaagaaatgtTGATTGACAACTTTAAAGTGGACGTAAGAAGGGAAATGCGTGTAGAAGGAGAGGCGGATTAG
- Protein Sequence
- MTQSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTIACDGGSSIKCHRMVLAACSPYFQNLFTELPCKHPVVVLKDVRYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSCRSPIREEPPPPIDQVPPIPTSNSIVPNPVHSSNRISPPPHSTNSMYKSPYSSYERKSHNDHNPRMNLPIWAVPGLPLPPHTASVPNQTHPHAAATAAAAMLSSAYEAVSSDMSPLKRKKLSSLLMQRDTPILRTVLGQGQTDSSQPVSLVCHPDNADLSGSEERMVKHMKNEPSEDAQSPYTDFTERMNDEEEKSKLAIPSSSPQSYTHDIRTTVTSGIATYVPSQKPEWKRYKQYTRNDIMSAIEAVKNGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFKRGNNGSSACFPYSSGSPYGGHLSESDENINNNSALLEASTFLQHALDSRGGDEREALAAMAAAAAVHAVASGHSTSPNNLGQARSPSPSPTMLKYMRHSSLTPSPAPGSDHHHSDQTNGSSERDREEEEDQVEDLSINRKQAIESRVIMPPMNQMSTIIKKEEMLIDNFKVDVRREMRVEGEAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295881;
- 90% Identity
- iTF_00443872;
- 80% Identity
- iTF_01240956;