Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: bab1
Assembly: GCA_963991005.1
Location: OZ022560.1:18782039-18787614[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.5e-12 2.2e-10 41.4 0.1 3 45 361 403 359 403 0.92

2 2 1.6 2.4e+02 2.9 0.2 6 18 469 482 466 487 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.5e-12	2.2e-10	41.4	0.1	3	45	361	403	359	403	0.92
2	2	1.6	2.4e+02	2.9	0.2	6	18	469	482	466	487	0.85

Sequence Information

Coding Sequence: ATGACTCAATCGCAGCAGTACTGTCTGCGATGGAACAATCATCGTTCAAACTTGCTGACTGTCTTCGATGAACTGCTCCAGAACGAGGCGTTCACGGATGTCACGATAGCGTGCGACGGAGGAAGTTCCATTAAATGCCATAGAATGGTTTTAGCGGCTTGCTCACCATATTTTCAGAACCTATTCACAGAGCTCCCATGCAAACATCCCGTGGTAGTATTAAAAGACGTACGGTACTGTGAAATCAAAGCCATTCTGGAATACATGTACAGGGGGGAAGTGAACGTAGCCCAGGACCAATTAGCTGCACTATTAAAAGTCGCAGAAGCACtgaaagttaaaggattggtgGAAGAAAATAGATCTTGCAGAAGTCCCCCTCGAGAAGAACCACCATTAGTAGATCAGGTGCCCACGATTCCAACGTCCAATTCCATTGTACCGAATCCCGTCCACAGCAGCAATAGGATAAGCTCGCCGCCCCATTCCACGAATTCGATGTATAAAAATCCGTATAGCTCATATGAAAGGAAACCACATAATGACCACAATGCCCGAATGAATTTACCTATTTGGGCTGTCCCTGGATTACCATTACCTCCTCACACTGCATCGGTCCCAAGCCAAACGCATCCCCATGCAGCAGCTACTGCCGCTGCCGCCATGTTAAGTAGCGCGTATGAAGCAGTAAGTTCAGACATGTCTCcactaaaaagaaaaaaattgagcAGCCTTTTAATGCAGCGAGACACTCCGATTTTGAGGACCGTGTTGGGACAAGGGCAAACCGACACCTCGCAGCCTGTTAGTTTGGTGTGCCATCCTGACAACGCAGATCTCTCTGGTAGCGAAGAAAGAATGGTGAAACATATGAAGAACGAGCCTTCTGAAGACGCCCAATCGCCTTACACGGATTTCACGGAACGCATGAACGACGAAGAAGAAAAATCCAAATTAGCCATTCCCTCTTCCTCCCCCCAATCTTATACACATGACATTCGAACAACCGTAACATCCGGAATTGCCACATACGTCCCTTCCCAAAAACCGGAGTGGAAAAGATATAAGCAATACACCAGGAATGACATTATGTCTGCTATTGAAGCGGTGAAAAACGGAATGTCCGCACTGCAAGCAGCCAGGAAATATGGTGTTCCTTCTAGAACTCTTTACGATAAGGTTAAGAAAATGGGAATTACGACGAGTAGACCGTTTAAAAGAGGAAACAACGGCAGCTCGGCGTGTTTCCCATATAGTTCAGGGTCCCCCTACGGGGGCCATCTATCTGAAAGCGATGAAAATATCAACAACAATTCGGCGCTTTTGGAAGCAAGTACGTTTCTGCAACACGCCTTGGATAGTAGAGGCGGCGACGAAAGAGAAGCTCTGGCTGCCATGGCGGCCGCAGCTGCAGTCCATGCTGTTGCTTCTGGACACTCTACTAGTCCCAACAACTTGGGACAAGCACGTAGCCCTAGCCCCAGTCCTACAATGCTTAAGTACATGAGGCATAGTAGTCTTACTCCTTCTCCGGCCCCGGGGAGCGATCATCACCATAGTGATCAGACGAATGGAAGCTCCGAAAGAGATAGAGAGGAGGAGGAAGATCAAGTCGAGGACCTGTCGATAAATAGAAAACAAGCTATCGAGTCGCGGGTTATAATGCCACCCATGAACCAAATGTCTGCCATAATAAAGAAGGAAGATATGTTGATTGACAACTTCAAGTTGGACGTAAGAAGGGAAATGCGTGTGGAAGGAGAGGCGGATTAG
Protein Sequence: MTQSQQYCLRWNNHRSNLLTVFDELLQNEAFTDVTIACDGGSSIKCHRMVLAACSPYFQNLFTELPCKHPVVVLKDVRYCEIKAILEYMYRGEVNVAQDQLAALLKVAEALKVKGLVEENRSCRSPPREEPPLVDQVPTIPTSNSIVPNPVHSSNRISSPPHSTNSMYKNPYSSYERKPHNDHNARMNLPIWAVPGLPLPPHTASVPSQTHPHAAATAAAAMLSSAYEAVSSDMSPLKRKKLSSLLMQRDTPILRTVLGQGQTDTSQPVSLVCHPDNADLSGSEERMVKHMKNEPSEDAQSPYTDFTERMNDEEEKSKLAIPSSSPQSYTHDIRTTVTSGIATYVPSQKPEWKRYKQYTRNDIMSAIEAVKNGMSALQAARKYGVPSRTLYDKVKKMGITTSRPFKRGNNGSSACFPYSSGSPYGGHLSESDENINNNSALLEASTFLQHALDSRGGDEREALAAMAAAAAVHAVASGHSTSPNNLGQARSPSPSPTMLKYMRHSSLTPSPAPGSDHHHSDQTNGSSERDREEEEDQVEDLSINRKQAIESRVIMPPMNQMSAIIKKEDMLIDNFKLDVRREMRVEGEAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01295881;
90% Identity: iTF_00443872;
80% Identity: iTF_00196426;