Delp007848.1
Basic Information
- Insect
- Deilephila elpenor
- Gene Symbol
- PAXBP1_1
- Assembly
- GCA_949752805.1
- Location
- OX457097.1:13677227-13689921[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.53 7.7e+03 -3.1 0.0 210 236 249 276 245 281 0.83 2 2 1.3e-12 1.9e-08 34.9 2.5 3 149 513 642 511 655 0.69
Sequence Information
- Coding Sequence
- ATGTCTCTGTTCCGTAAACCAAAGAAGATTCAGCGGCGCATGTTTTGTGCTGATGATGACGAGGACGCGGAGCCTGAGGCGCCTCCGCCGCCGATCATCAGCCAGGAGCGGGAGAAGAAGGAAAACAAACCGGTGAAAACCAAACAGTTGCTGAGCTTCGCTGATGAAGAGGAAGAGGTAGAAGTGTTCAAGGTGAAGAAATCATCGCAGAGCAAGAGGCTGGCCAAACGCAGGGAAAAGGAAAGACGGAAGCTCCCAGATGGTGATAGTAACAAATATGACAATGATAATCATGAGGAGGACAGCAACCACATGGAAGTCGACGAGGAGGCGCCTAAACCCAAGAAGAAGGTGACGTTGGAGGGTTTGATCCTGTCGGGGCGGGAAGCGCTGGCTGCCGACGGGGCTGGAGACATCTCGGAGGAGGACCCCGAAGAGGAAGACAGGGGGTTCCACCGGTACCGCGCCGAGTCGGTGAGGGCCGCGCTGGCCGTCCCCGGCGCCATTCCCGACGCCGCGCTCATCCACGCCGCGCGCAAGACGCGACAGCAGGCTCGCGAGCTGGGCGACTTCGTGCCGGTGCCGTCGGAGGCGCCGGCCGGCTCGCGCCTGGTGCGGGACGACGACGGCTCGGCTGATGAAGACGAGGACGGCAGGATACACGTCAGGGGACTGGATCTGCCCAGTGACAAGCCCAAACGTGGCACGGCGGCGGCGTCTCCCGACTCGGAGCAGAACAGCGACGCGGACGAGTGGGAAGAGCAGCAGATGCAGAAGGCCATGCCGGCCATCACTGATATTGCAGAGTCGGCGCTGGAGTTGAACCCGTTCGCGGCGGCTCCGGTGGCGGTGTCGCTGCGCGCGGTGACGGAGGCGCACCTGCGGCCGCTGagcaccgcgccgccgcacctCGCGCCCGCCAGCGCCGCCGACCTCGTGCTGGCGCTCAGGGAACGGCTGGAGGAGCTGAAGCTGGAGCGCGAGAAGACGGCGGAGAAGCGTGCGCAGGTGGTGTCGCGGCTGCAGCGCGCGGCGCACGTGCGCGTGTGTGCGGGCGAGCGGCGCGCGCGCCTCGCCGCCGCGTACAAGCGGGCGCAGGCCGCGCGCGGGTACCTCACTGACCTGGTGGAGTGTCTGGACGAGAAGATGCCGCAGCTTGAGGCCTTGGAGGCGCGTGCGCTGGCGATGCACCGGCGCCGCTGCGAGTTCCTCATCGAGAGGAGGAGGGCTGATGTCAGGGACCAGGCGCAGGACGTACTCTCCATGGCTGcTCGTGCGGGTTCAATAAAGCCAGTAGACACAGAAGAGAAGATTCGTCGCGCGGCGGAGCGCGAGGGgaggcgccgcgcgcgccgcctgcGCCGCGAGCAGGCCGCCGCCGCCTCGGGCTCCGCCCTCGCGCACCGCGACGGAGACTCCAGCGACGACGAGCTGCCGCCGCCCGAGCTGCACCACTATCATACTGAGAGAAAGGCGATCCAGTCGGGAGCGGCGTCGGTGTTCGCGGACGCGCTGGGCGCGTGGCGCAGCGTGCGCGGCGTGTGCGCGCGCCTGGCTCGCTGGCGCCGCCGCCACCCCGCGCTCTACGCACGCGCCTACCTGCCGCACGCGCTGCCCAAGCTGCTCGCGCCGTACGTGCGGCACCAGCTGATTCTGTGGAATCCTTTGGCGGATGAAGACAATGAGGATTACGAAAAAATGGACTGGTACAAATGCCTGATGATGTACGGCGTGCGCTACGAGAAGCCATCCAGCTCGTCGTCAGAGTCGGACTCGGACGGCGGCGCGGGGGAGCAGCCCCTCAGCGTGTCGGAGGACGCCGTGAGAGATGATGTGGACTTGTTGCTCGTGCCCACTATTGTCAATAAAGTCGTGCTTCCTAAGCTTATTGAGCTGGTGGAGCAGGCGTGGGACCCGCTGTGCGTGCGCGCGTGCGTGCGGCTGCGCCAGCTGGTGTTGCGTGCGGCGGGGGGTCCGGCGGGGGGTCAGGCGGGGGGCCACGCGGGGGGCGCGCTGCGGCGGCTGGCGGCGGCCATCTCGGCGCGGCTGGTTGCGGCGCACAACGCGGACGTGTTCCTGCCCGCACTGCCGCCACACGTGGCGGAGGGTCCGGGCGGCGCGTTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGGCTGCTGCGTGCGTCGCTGGCGCtggccgcgccgccgccgctgctgcGGGCCGACGCGCTCGTGCTCGCGCTCATCGAGACGTTGTgtcgcgcggcgggcgcggcgccggcgccgcTGATGGTGGTGGCGGGGGCTGCGCTGGCGGACACGCTGCCGCGCGCCGGAGCCctgcgcgccgccgcgctgcgcCGCCTGGCCGCGCTGGCGCAGCTCGCGCTCTCGCGCCTGCACCACGACAACCCGCTGCAcatgcGAGCGATAGAACAAGCACGTACAATAATAGCGGACGCGCGCGCGGCTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRMFCADDDEDAEPEAPPPPIISQEREKKENKPVKTKQLLSFADEEEEVEVFKVKKSSQSKRLAKRREKERRKLPDGDSNKYDNDNHEEDSNHMEVDEEAPKPKKKVTLEGLILSGREALAADGAGDISEEDPEEEDRGFHRYRAESVRAALAVPGAIPDAALIHAARKTRQQARELGDFVPVPSEAPAGSRLVRDDDGSADEDEDGRIHVRGLDLPSDKPKRGTAAASPDSEQNSDADEWEEQQMQKAMPAITDIAESALELNPFAAAPVAVSLRAVTEAHLRPLSTAPPHLAPASAADLVLALRERLEELKLEREKTAEKRAQVVSRLQRAAHVRVCAGERRARLAAAYKRAQAARGYLTDLVECLDEKMPQLEALEARALAMHRRRCEFLIERRRADVRDQAQDVLSMAARAGSIKPVDTEEKIRRAAEREGRRRARRLRREQAAAASGSALAHRDGDSSDDELPPPELHHYHTERKAIQSGAASVFADALGAWRSVRGVCARLARWRRRHPALYARAYLPHALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRYEKPSSSSSESDSDGGAGEQPLSVSEDAVRDDVDLLLVPTIVNKVVLPKLIELVEQAWDPLCVRACVRLRQLVLRAAGGPAGGQAGGHAGGALRRLAAAISARLVAAHNADVFLPALPPHVAEGPGGAFWRRCVGAGVRLLRASLALAAPPPLLRADALVLALIETLCRAAGAAPAPLMVVAGAALADTLPRAGALRAAALRRLAALAQLALSRLHHDNPLHMRAIEQARTIIADARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01429954; iTF_00429030; iTF_00820101; iTF_00290727; iTF_00341333; iTF_00787670; iTF_00063609; iTF_00858563; iTF_01010374; iTF_00859486; iTF_01358887;
- 90% Identity
- iTF_01429954; iTF_00820101; iTF_00429030;
- 80% Identity
- -