Mtil008044.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- PAXBP1
- Assembly
- GCA_905332985.1
- Location
- HG995242.1:16871411-16892954[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.004 48 3.8 0.0 168 206 482 520 477 521 0.85 2 2 2.6e-14 3.1e-10 40.5 0.3 6 185 513 674 508 680 0.71
Sequence Information
- Coding Sequence
- ATGTTTGCGTTCCGTAAACCGAAGAAGATTCAACGACGTGTGGCTTGCGCTGATGATGACGAGGACGCGGAGCCCGAGGCGCCTCCTCCGCCGGTCATCAGCCAGGAGAAGAAAGAAAAATCAGTGAAATCTACACCATTACTGAGTTTTGCTGATGAAGAGGAGGAGGTTGAAGAGTTCAAGGTAAAGAAATCATCTCAAAGCAAGAGACTGGCGAAGCGCAGGGAGAAGGAGAGACGGAAGGTCCCTGATGGTGATAATAACAAATATGACAATAACACCAATGAGGAGAACAGCAACCACATGGAAGTGGACGAAGAACCGCCCCCCAAGCCGAAGAAGAAAGTGACTCTCGAGGGTTTGATACTGTCGGGACGGGAGGCTCTCGCTGCAGACGGTGCTGGAGACATCTCGGAGGAGGAGGAAGAGAATGAAGAAGACAGGGGGTTCCACCGGTACCGCGCGGAGTCGGTCAGGGCCGCGCTGGCCGTGCCCGGGGCCATCCCGGATGCTGCGCTCATCCACGCAGCGCGCAAGACGCGACAGCAGGCCCGCGAGCTCGGTGGAGACTTCATACCTGTACCATCGGAGGCGCCGGCCGGCTCGCGGCTGATCAGGGACGACGACGGCTCTGGCGACGATGACGATGACGAGGGCAGGATCCACGTTAGGGGCCTGGACTTGCCCAGCGACAAGCCTAAACGTGGCACTGCCGCTGCAGCTCCTGATGAGGAGTTCAACAGCGATGTTGACGAGTGGGAAGAGCAACAGATGCAGAAAGCGATGCCAGCCATCGCTGATATAGCTGAGAGTGCGGTAGATTTAAATCCGTTTGCAGTACAAGCAGCACCGGTGTCGCTGGGTGCTGTCATACACCCACATCTGCGTCCGCTTGCTGCAGCACCACCCACCAATGCACATGATCTGGTTTTAGCGCTTAGGCAAAGGCTAGAAGAGTTGAAGATGGAGCGCAACAAGACAGCGGAGAAGTGTGAGGAGGTGATGTGTCGGCTGCAGGAGACGGCGCGCGTGCGCGTGTGCGCGTCGTCCCGCTGCGACGCGCTCGCCGGTGCGTACAAACGTGCGCAGGCGGCCAGGGGATATCTCACCGATCTCGTCGAGTGTCTCGATGAAAAGATGCCGCAGCTGGAAGCGCTGGAGAGCCGCGCGCTGGCGATGCACCGGCGCCGCTGCGAGTTCCTGGTGGAGCGACGTCGAGCTGACGTGCGAGATCAGGCTCAAGATGTACTCTCCATGGGAGCCCGCGCCGGAGCCGTGAAGCCAGTCGAGACAGAAGAGAAGGTACGTCGCACGGCGGAGCGCGAGGGCCGGCGACGCGCTCGGAGGCTCAAGCGGGAAGCAGCAGCAGCCGCCTCGGGCGCCGCCCTGCACCATCGCGACGGAGACTCCAGCGACGACGAACTGCCGCCACATGAGCTGCACCACTACCGCGCAGAGAGAGAAGCGATCTCATCTGAAGCGCGCGCGTTGTTCGCGGACGCCCTGGGCGCGTGGCGCACAGCGGGCGGCGTGTGCGCGCGCATCGCTCGCTGGCGACGTCGCGACCCCGCACTGTACGCGCGCGCGTACCTGCCCGCCGCGCTGCCCAGACTGCTCGCGCCGTACGTCAGGCATCAGCTGATACTGTGGAACCCTTTGGCAGACGAAGACAATGAAGATTACGAGAAAATGGACTGGTACAAATCGCTGATGATGTACGGCGTCCGTAGTGAGAAGCCGTCGAGTGATTCGTCAGGGTCGGAGTCTGACGGATGCGCTGAGGATTCACCCCCCACCCTCACCGAGGATGCGGTGCGGGATGATGTGGATCTGTTGTTGGTGCCCACCATCGTCAACAAGGTTGTGCTGCCCAAGCTTGTCGAGCTGGTGGAGCAGGCGTGGGACCCGCTGTGCGTGCGCGCGTGCGTGCGCGTGCGCCAGCTGGTGCTGCGCGCGGCGGAGTCGCCGGCGGGTGCGCATGCGCTGCGCCGCCTGGCCAGCGCCGTGCACGCCAGGCTCGTCGCTGCACATCACGCTGATGTCTTCCTGCCCGCACTGCCGCCACACGTGGCGGAGGGCGCGGGCGGCGGGTTCTGGCGGCGCTGCGTGGGCGGCGGCGTGCGCATGCTGCGCGCCACGCTAGCGCTGGCCGCGCCGCCGCCGCTGCTCACCGCTGAACACACTGTGCGAGCGCTTATCGACACGTTGTGCATGGCGGCGGGCGCGGCGCCGGCGTGCCTGATGGTGTCGGCGGGCGCGGCGCTGGCGCACACGCTGCCGCGCGCCGGCCGCATCCGCCGCGACGCCATGGCGCGACTAGCGCAGCTCGCGCAGCTTGCGCTCTCCCGCCTGCAGACCGACAACCCGCTGCACTTCAAAGCATTGGAGCAAGCGCGAGCGATCATAGCAGACGCGCGCGCGGCTGAATGA
- Protein Sequence
- MFAFRKPKKIQRRVACADDDEDAEPEAPPPPVISQEKKEKSVKSTPLLSFADEEEEVEEFKVKKSSQSKRLAKRREKERRKVPDGDNNKYDNNTNEENSNHMEVDEEPPPKPKKKVTLEGLILSGREALAADGAGDISEEEEENEEDRGFHRYRAESVRAALAVPGAIPDAALIHAARKTRQQARELGGDFIPVPSEAPAGSRLIRDDDGSGDDDDDEGRIHVRGLDLPSDKPKRGTAAAAPDEEFNSDVDEWEEQQMQKAMPAIADIAESAVDLNPFAVQAAPVSLGAVIHPHLRPLAAAPPTNAHDLVLALRQRLEELKMERNKTAEKCEEVMCRLQETARVRVCASSRCDALAGAYKRAQAARGYLTDLVECLDEKMPQLEALESRALAMHRRRCEFLVERRRADVRDQAQDVLSMGARAGAVKPVETEEKVRRTAEREGRRRARRLKREAAAAASGAALHHRDGDSSDDELPPHELHHYRAEREAISSEARALFADALGAWRTAGGVCARIARWRRRDPALYARAYLPAALPRLLAPYVRHQLILWNPLADEDNEDYEKMDWYKSLMMYGVRSEKPSSDSSGSESDGCAEDSPPTLTEDAVRDDVDLLLVPTIVNKVVLPKLVELVEQAWDPLCVRACVRVRQLVLRAAESPAGAHALRRLASAVHARLVAAHHADVFLPALPPHVAEGAGGGFWRRCVGGGVRMLRATLALAAPPPLLTAEHTVRALIDTLCMAAGAAPACLMVSAGAALAHTLPRAGRIRRDAMARLAQLAQLALSRLQTDNPLHFKALEQARAIIADARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428141;
- 90% Identity
- iTF_00063609;
- 80% Identity
- -