Chyl004415.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- PAXBP1
- Assembly
- GCA_030295005.1
- Location
- AP025363.1:12989451-13003196[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00071 8.7 6.3 0.0 170 206 484 520 477 524 0.83 2 2 5.3e-13 6.4e-09 36.2 1.3 3 148 510 637 508 653 0.82
Sequence Information
- Coding Sequence
- ATGTCTCTGTTTCGTAAACCAAAGAAGATCCAGCGGCGCGTGTTttgtgctgatgatgacgagGACGCAGAGCCCGAGGCGCCTCCGCCGCCAGTCATTAGTCAGGAAAAggagaaaaaagaaaacaaacctGTGAAATCTACTCAATTGTTGAGTTTTGCTGACGAAGAGGAGGAAGTTGAAGTCTTCAAGGTAAAGAAATCGTCACAGAGCAAGAGATTGGCCAAACGCAGGGAGAAGGAGAGACGCAAGTTCCCTGACGGTGATAGTAACAAATTAGACAATGTTAATAATGAGGAGAACAGCAACCACATGGAGGTGGACGAGGGCCCACCAAAGCCGAAGAAGAAGGTGACGCTGGAGGGTTTGATACTGTCCGGTCGGGAGGCTCTGGCGGCCGATGGCGCTGGGGACATTTCCGACGGGGACGAGGAGCAAGAGGAAGAGGAAGACAGGGGGTTCCATCGGTACCGCGCCGAGTCGGTCAGGGCCGCGCTGGCGGTCGCGCCCGGCGCCATTCCCGACGCCGCGCTCATCCATGCGGCGCGCAAGACGCGACAGCAGGCTCGCGAGTTGGGAGACTTCGCCCCGGTGCCGTCGGAGGCGCCGCCCGGCTCGCGGCTCGTGAGGGACGACGACGCCTCTGCTGATGAGGATGAAGATGGCAGGATACATGTTAGAGGCCTGGAGTTGCCTAGTGACAAGCCTACACGCGGCACGGCGGCGGCGTCCCCCGGTTCGGAGCAGAACAGCGACGCGGACGAGTGGGAGGAGCAACAGATGCAGAAAGCCATGCCTGCCATAGCAGATATAACCGAGAGTGCAGTGGAATTGAACCCGTTCGCTGCGCCGCGGGGTGCAGTTTCCGTCCGCAGTGTTACGGAGCCGCACCTGCGCCCGCTCAGCGCCACCACCGCCGCCGACCTCGTGCAGGCGCTCTCGCAGCGTTTACAAGAACTCCAAACCGAGCGTGATGCTTGCGTGTCCCGGCGCGAGGCGACCTCCTGCCGGCTGCAGCGGTGCGCGGCCGCACGTCTGTCCGCGACGGCGCGCCGCGCCACACTGGCATCGGCGTACAAGCGCGCGCAGGCCGCCCGGGGGTACCTTACGGATCTTGTCGAGTGCTTGGATGAGAAGATGCCGCAGCTGGAAGCGCTGGAGGGTCGCGCGCTGGCGATGCACCGGCGGCGCTGCGAGTTCCTCATCGAGAGGCGGAGGGCAGACGTCCGAGACCAGGCGCAGGACGTGCTCTATATGGCGGCCCGCGCAGGCGCAGTAAAGCCCGCCGAGACAGAAGAGAAGGTCCGCCGTGCCGCGGAGCGCGAGGggcgccgccgcgcgcgccgcctgcGCCGGGAGCACGCCGCCGCCGCGTCGGGCGCCGCCCTCGCGCACCGCGACGGAGACTCCAGCGACGACGAGCTGCCGCCGCACGAGATGCACCACTACCAACATGAACGGAAAGCGATATCGTCGGAAGCGGCGGCCCTGTTCAGCGACGCGCTGGCGGCGTGGCGCAGCGTGCGCGGCGTGTGCGCGCGCCTGGCCCGCTGGCGCCGCTCGCACCCCGCGCTGTACGCGCGCGCCTACCTGCCGCCCGCGCTGCCGCCGCTGCTGGCGCCCTATGTCCGGCACCAGTTAATCCTGTGGAATCCTTTAGCAGACGAAGACAACGAAGACTATGAGAAAATGGACTGGTACAAATGTCTCATGATGTATGGCGTACGCTGTGAGAAGGCGAGCAGTTCGTCAGGGTCGGACTCCGACGACGTTGAGGAGCCCCAGCCCCCCATCGTGACGGAGGACTCCGTGAGGGACGACGTGGACTTGATGCTCGTCCCCACTATAGTCAACAAGGTGGTGCTGCCTAAAATCATAGAGCTTGTAGAGCAAGCGTGGGACCCGATGTGCGTGCGCGCGTGCGTGCGGCTGCGGCAGCTGGTGTTGCGGGCTGCTGCGGGCCCGCTGGCGGCTCAGGGGGGGTCCGGGGCCCCGCTCCGGCGCCTGGGTGCGGCCATAGCATCTCGACTAGCTGCAGCACACAACGCCGATGTGTTCCTGCCTGCACTGCCGCCACACGTGGCGGAGGGTCCCGGCGGCGTGTTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGGCTGCTGCGCGCGTCGCTGGCActggccgcgccgccgccgctgctGCGCGCCGACCGCAGCGTGCTGGCGCTCATCGAGACGCTATGCCGTGCTGCGGGCGCTGCGCCGGCGCCGCTGATGGTGCTGTGCGGCGCTGCGCTGGCGCACACTCTGCCGCGTACTGGCGCACTGCGCGCCACCGCACTGCGCCGACTCGCCGCGCTGGCCACGCTGGCGCTCTCCCGCCTGCAGCACGACAACCCGCTGCACATGAGGGCGATAGAGCAGGCGCGCACGATAATAGCGGACGCGCGCGCGGCTGAATGA
- Protein Sequence
- MSLFRKPKKIQRRVFCADDDEDAEPEAPPPPVISQEKEKKENKPVKSTQLLSFADEEEEVEVFKVKKSSQSKRLAKRREKERRKFPDGDSNKLDNVNNEENSNHMEVDEGPPKPKKKVTLEGLILSGREALAADGAGDISDGDEEQEEEEDRGFHRYRAESVRAALAVAPGAIPDAALIHAARKTRQQARELGDFAPVPSEAPPGSRLVRDDDASADEDEDGRIHVRGLELPSDKPTRGTAAASPGSEQNSDADEWEEQQMQKAMPAIADITESAVELNPFAAPRGAVSVRSVTEPHLRPLSATTAADLVQALSQRLQELQTERDACVSRREATSCRLQRCAAARLSATARRATLASAYKRAQAARGYLTDLVECLDEKMPQLEALEGRALAMHRRRCEFLIERRRADVRDQAQDVLYMAARAGAVKPAETEEKVRRAAEREGRRRARRLRREHAAAASGAALAHRDGDSSDDELPPHEMHHYQHERKAISSEAAALFSDALAAWRSVRGVCARLARWRRSHPALYARAYLPPALPPLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRCEKASSSSGSDSDDVEEPQPPIVTEDSVRDDVDLMLVPTIVNKVVLPKIIELVEQAWDPMCVRACVRLRQLVLRAAAGPLAAQGGSGAPLRRLGAAIASRLAAAHNADVFLPALPPHVAEGPGGVFWRRCVGAGVRLLRASLALAAPPPLLRADRSVLALIETLCRAAGAAPAPLMVLCGAALAHTLPRTGALRATALRRLAALATLALSRLQHDNPLHMRAIEQARTIIADARAAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428141;
- 90% Identity
- iTF_00787670;
- 80% Identity
- -