Cbil012837.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clanis bilineata
Gene Symbol
PAXBP1
Assembly
GCA_036417725.1
Location
CM071151.1:16973057-16997722[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.013 87 3.1 0.0 169 205 479 515 473 516 0.85
2 2 1.3e-13 8.5e-10 39.2 0.6 7 147 510 632 504 669 0.84

Sequence Information

Coding Sequence
ATGTTTGCATTCCGTAAACCCAAGAAGATCCAGCGGCGTGTGGCTTGTGCTGATGATGACGAGGATGCGGAGCCAGAGGCGCCTCCACCACCGGTCATCAGCCAGGAAAAGAAGGAAAAACCAGTTAACTCAACACCCTTATTAAGCTTTGCTGATGAAGaGGAGGAGGTAGAAGTGTTCAAGGTAAAGAAGTCATCGCAGAGCAAGAGGCTGGCCAAGCGCAGGGAGAAGGAACGACAGAAGGTCCCTGATGGTGATAATAACAAATTAGACAATAACACTAATGAGGAGAACAGCAACCACATGGAGGTGGACGAAGAGCCATCCAAACCGAAGAAGAAAGTGACTCTCGAGGGTTTGATACTGTCGGGGCGGGAGGCGCTCGCTGCAAACGGCGCGGGGGACATCTCCGACGAGGAGGAAGAGGACAGGGGCTTCCACCGGTACCGTGCGGAGTCGGTCAGGGCCGCGCTGGCCGTGCCCGGGGCCATCCCCGACGCCGCGCTCATCCACGCCGCGCGCAAGACGCGACAGCAGGCCCGCGAGCTCGGTGGAGACTTCATACCCGTCCCGTCGGAGGCGCCGGCCGGCTCGCGGCTCGTGAGGGACGACGACGGCTCCGGTGACGATGATGACGACGAGGGCAGGATACACGTTAGGGGCCTCGACCTGCCCAGCGACAAGCCCAAACGTGGTACAGCCGCCGCGTCTCCCGACGAGGAGCTCAACAGCGACGTGGACGAGTGGGAGGAACAGCAGATGCAGAAAGCGATGCCCGCCATCGCTGATATAGCCGAGAGCGCGGTGGAATTGAACCCGTTCGCGGTGGTGGCGGGCCCGGTGTCGCTGTGCGGGGTGACGCAGCCGCACCTGCGCCCCCTCGCGCCCACGCCCCCCACCACAGCGCACGACCTCGTGCTGGCGCTCAGGCAGAGACTGGAGGAGCTGAAGCTGGAGCGCGACAAGACGTGTGCGAAGCGCTCGGAGGTGTCGTCGCGCCTGCAGCAGTCCGCCTGCAGCCGCGGGGCCGCGcgctcgcgccgcgccgcgctcgcCGCCGCCTACAAGCGGGCGCAGGCCGCGCGCGGGTACCTCACCGACCTCGTCGAGTGTCTCGACGAGAAGaTGCCTCAACTGGAAGCGCTGGAGAGTCGCGCGTTGGCGATGCACCGGCGGCGCTGCGAGTTCCTGGTGGAGCGGCGCCGCGCCGACGTGCGGGACCAGGCGCAGGACGTGCTCGCCATGGGAGCCCGTGCGGGTGCAGTGAAGCCGGTGGACACGGAGGAGAAGGTGCGGCGCACAGCGGAGCGCGAGGGGCGGCGCCGCGCTCGCCGGCTAAAGCGCGAGGCCGCCGCCGCAGCCTCGGGCGCCGCCCTGCACCACCGCGACGGGGACTCCAGCGACGACGACCTGCCGCCGCACGAGATGCACCACTACCGACAGGAGAGAGAGGCGATATCGTCGGAGGCGCGGTCGTTGTTCGCGGACGCGCTGGGGGCGTGGCGCAGCGCGGGCGGCGTGTGCGCTCGCGTGGCGCGCTGGCGCCGCCGCGACCCCGCGCTGTACGCGCGCGCCTACCTGCCCGCCGCGCTGCCCCGGCTGCTCGCGCCGTACGTGAGGCACCAGctgATCCTGTGGAACCCTTTGGCTGATGAAGACAATGATGATTACGAGAAAATGGACTGGTACAAATCGCTGATGATGTACGGCGTCCGTTGTGAGAAGCCGTCGAGCGGTTCCTCGGAGTCGGACTCGGATTGCACGGAGGAGTCGCCCCCCACCGTCACCCAGGAGACGGTCCGCGAGGACGTGGACCTGATGCTGGTGCCCACCATCGTCAACAAGGTGGTGCTGCCCAAGCTCGTCGAGTTGGTGGAGCAGGCGTGGGACCCGATGTGCGTGCGGGCGTGCGTGCGGCTGCGGCTGCTGCTGCTGCGCGCCGCCGACGGGCCGGGCGGGGCGGAGGCGCTGCGGAGGCTCGCGGGCGCGGTCTCGGCGCGGCTGGCGGCGGCGCACCACGCAGACGTGTTCCTGCCAGCGCTGCCGCCGCACGTGGCGGAGGGCGGCGGCGGTCCGTTCTGGCGGCGCTGCGTGGGCGCGGGCGTGCGGCTGCTGCGCGCCACGCTCGCGCTGGCCGCGCCGCCGCCCCTGCTCACCGCCGAACACACCGTGCTCGCGCTCATcgACACGCTGTGCATGGCGGCGGGCGCTGCGCCCCCGTGCCTCATGGTGGTGGCGGGCGCGGCGCTGGCGCACACGCTCCCCCGCGCGGGCCCCGTGCGGCGCGCCGCGCTGGCTCGCATCGCGGCGCTGGCGCAGCTCGCGCTCAGCAGGCTGCAGACCGACAACCCGCTGCACTACAAAGCTCTGGAGCAAGCGCGGGCGATCATTGCAGACGCGCGCGCGGCTGAATGA
Protein Sequence
MFAFRKPKKIQRRVACADDDEDAEPEAPPPPVISQEKKEKPVNSTPLLSFADEEEEVEVFKVKKSSQSKRLAKRREKERQKVPDGDNNKLDNNTNEENSNHMEVDEEPSKPKKKVTLEGLILSGREALAANGAGDISDEEEEDRGFHRYRAESVRAALAVPGAIPDAALIHAARKTRQQARELGGDFIPVPSEAPAGSRLVRDDDGSGDDDDDEGRIHVRGLDLPSDKPKRGTAAASPDEELNSDVDEWEEQQMQKAMPAIADIAESAVELNPFAVVAGPVSLCGVTQPHLRPLAPTPPTTAHDLVLALRQRLEELKLERDKTCAKRSEVSSRLQQSACSRGAARSRRAALAAAYKRAQAARGYLTDLVECLDEKMPQLEALESRALAMHRRRCEFLVERRRADVRDQAQDVLAMGARAGAVKPVDTEEKVRRTAEREGRRRARRLKREAAAAASGAALHHRDGDSSDDDLPPHEMHHYRQEREAISSEARSLFADALGAWRSAGGVCARVARWRRRDPALYARAYLPAALPRLLAPYVRHQLILWNPLADEDNDDYEKMDWYKSLMMYGVRCEKPSSGSSESDSDCTEESPPTVTQETVREDVDLMLVPTIVNKVVLPKLVELVEQAWDPMCVRACVRLRLLLLRAADGPGGAEALRRLAGAVSARLAAAHHADVFLPALPPHVAEGGGGPFWRRCVGAGVRLLRATLALAAPPPLLTAEHTVLALIDTLCMAAGAAPPCLMVVAGAALAHTLPRAGPVRRAALARIAALAQLALSRLQTDNPLHYKALEQARAIIADARAAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00428141;
90% Identity
-
80% Identity
-