Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992530.1:49622888-49628110[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.082 23 7.8 4.2 1 23 1171 1194 1171 1194 0.97

2 12 0.00029 0.08 15.5 5.3 2 23 1358 1379 1358 1379 0.97

3 12 2.7e-05 0.0074 18.7 0.3 1 23 1385 1407 1385 1407 0.97

4 12 1.7e-07 4.8e-05 25.6 3.6 2 23 1414 1435 1413 1435 0.97

5 12 8.3 2.3e+03 1.5 0.1 6 23 1449 1466 1447 1466 0.95

6 12 0.009 2.5 10.8 3.4 3 23 1473 1494 1471 1494 0.95

7 12 0.16 44 6.8 0.1 2 23 1505 1525 1504 1525 0.96

8 12 0.00022 0.062 15.8 0.8 1 19 1531 1549 1531 1550 0.96

9 12 0.00015 0.04 16.4 0.4 1 23 1561 1583 1561 1583 0.98

10 12 0.00025 0.069 15.7 9.0 1 23 1589 1611 1589 1612 0.96

11 12 0.0013 0.36 13.4 4.7 1 23 1617 1639 1617 1639 0.98

12 12 0.0016 0.45 13.1 6.0 1 23 1645 1667 1645 1668 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.082	23	7.8	4.2	1	23	1171	1194	1171	1194	0.97
2	12	0.00029	0.08	15.5	5.3	2	23	1358	1379	1358	1379	0.97
3	12	2.7e-05	0.0074	18.7	0.3	1	23	1385	1407	1385	1407	0.97
4	12	1.7e-07	4.8e-05	25.6	3.6	2	23	1414	1435	1413	1435	0.97
5	12	8.3	2.3e+03	1.5	0.1	6	23	1449	1466	1447	1466	0.95
6	12	0.009	2.5	10.8	3.4	3	23	1473	1494	1471	1494	0.95
7	12	0.16	44	6.8	0.1	2	23	1505	1525	1504	1525	0.96
8	12	0.00022	0.062	15.8	0.8	1	19	1531	1549	1531	1550	0.96
9	12	0.00015	0.04	16.4	0.4	1	23	1561	1583	1561	1583	0.98
10	12	0.00025	0.069	15.7	9.0	1	23	1589	1611	1589	1612	0.96
11	12	0.0013	0.36	13.4	4.7	1	23	1617	1639	1617	1639	0.98
12	12	0.0016	0.45	13.1	6.0	1	23	1645	1667	1645	1668	0.96

Sequence Information

Coding Sequence: ATGGGTGGAAACGTGCAATGTCCGGTTTGTACACTGTTCCTGCTTCCGGGCATGAATTTGTCGGATCATCTGGAAACCCATCCAAAGGAGCAAGTCATAAAAGCCCTCGTTCAAATGAGCCTTAAATCTGAGACATCTGAAACGACGACAACACCAGACACTCCTAAGAAAGCCAACAAAACCTCTTTCTCAGAGCCCGATGAAACTTCTCATCTAGCCACAGAAGATGAAAGAGCTTCTCCGATATCAGAAATAAGTGGCAGTGACAGTGCCCCTGGTATGGTGGAACCAGAAACTACGAAAAGAACTGAAAAAGAGAGCAATAATACGATGCTCCAATCTGCGCCGCCTTTAAATGTATTAAACAGAcaaggtgaatatatttttgaaaataatagtagcagcagcaacagcagtaCTTTCTTTGGACCACCGAACCCATATTAtcatcatcaacaacaacaacaacataatcatcatcatcatcatcaacaactGCAGCaccaacaacagcagcaacaacagcaacagcaacaacagcagcatcaTCAACAGCAAAATCTACATCATCAACAGCATCAGCAACATGTTAATCATCATAATTATCAACCTTATAATGGTCTCTCACACGGTGGAAATAACAATTTCACTGGCCACGGACCAACAAATCCTCCAATGCGACTCTTCTCCTATCAACCAACACCCAAGCCATTGCAACCACCACCTGCATATGGCGCCGCCATAAGTCAACTTCGAtctcaaaatagccaaaatctAATGTCAAACACAATTCATCGGCCCTTGTATTCTCCAGGAAACTACACCCTTTCACCATCAGCGTCAACTTCAGCGTCTTCTTCATCGACACCATCTCGTCTGCCTCCCCCACTTCCGCCACCACCTCTTAACCAGCGCTATCAGTCGAACTTTGAGACAATGGATACAGTCTTTACTGACACAGATGATACAAGTGCAATATCTCCAAGACGTACTTCGATGACACCACCAACTAGACCTCCTCCCCAATTATATCGTTCACCTCAATCTTCATCGAATGCCCAATTCAGTAGACAGTCAGGCTCCCCCTACTCAGTTATGTCAGGCTCTCCATCCGTATTGCGATTTGCTGAATCGCCTGTTACAGCTCACTATCTAGAGCGAGAGAATGGTGATTTCATTGTGCAAGAAACACCTAAGCATGTCGTGGAGTGTGTTGAAAAAGACGATGGGGAATTTTCTGTGATCGAGCGAGTCTATCATATGCCACCGAGTGTTGTTCAAATAAATGAAGACGAAGAAGATGAATTGTCAGAGCACGGATCAAATAGTGAAGATGTCAAACTGATTGAGGACGATCCTCCAAATGAAAATTGGGCTGGTGGAGAGTCCTCGGATCAAGGTCAGAAAtcagaaagaacagaaaattcacaaaaaaaatctggcATAACCGTACTCAGTGATGTACAATTAGACTTAAGTGAATATCTAGACCTAGTGGGTAACATTATAGCTTCGGGAAAAGTTGCTAAAAATCGGTCTGAATtgataaaagttgaaaaattcgAACCGGAAGAAGTGAAAGAAGAAGACGAAATGCGTCTAGAGGACGATGATGAGGCCGCTGTTTTAATTAACAATAGTCAGAAATGCCAAGCGACAGAAGAACAGAAACTACAGCCTAGTAATGATTCAGCAGCATACTGCCCTCTGCCGTTACCATCGGATATCTCAAAGTTAGAATCGTGTGCGTCATCATCAGTGGCTCCAGTGACAACAAGTGTTATTCGTCTGGCGGCAACTGTTAATGCAAAAACCAGTTCACTTGTAGCACCGGCAACAAAGATTGAAGAGCCAATGCATGAAGAATGCTCTAACACACTAACAACGACAAAGGTTGAGGAACAAATGGAAGTAAGTTATATTGAGGACGAGAAGCCTACAACTAGCCTTAAAATAGAAACGGAATCAACAAGCAATAGTAAATCATTTTATATGGATCCGGAATTAGTTGGAACCAGCACACCTACAAACAAGACTGAGGAAGTAATAAAAGCAACAAGTTTAGAAAATGTAATACCCCAAGCTCCAGTAGAAGATATTTCTACTCACACAACAGACGAAATACCagacaaaactgaaaacaaagaGGTTAATTCAACTATTAATTCGTTCCAACAAACATTGAAGCGGCCAATAAAGAAGGGTCCGAAAAAGCTTATAATTAAGCCAAAAAACAAAGATGCTAGTACATCTAAAGCAATTACAGAAAAAACGGCAACTTCAATCAATGATCCGACGCCGCCAATTCAAATGCCAATGCCAATACCATCTACCTCGAGtgaaaattccaatccacaaCAGCAAAAAGAAGAAGTTACTACAGAAGATTGCTCGCCACAAGATGAACTCAATAGTATTAAGATTGAAAGTTTATCTTCTGTTATATCGGATCCAATTCTCTTGCGGCCTTTGCTTGCCGACGCTGATGAAAAACTTCCGCCTGAAGATGATGCGCAACCCCAACCCTCAACATCAAGTTCAATAGTTTCAGCAGAGAAACAAGACACGGAAGATTTTCAGTTGGAAGGGGAGAAACCCACCGCCGATTTAACAGCATTAATTGATGAGTGTctgaaaaaagaagaagaagaagatcaTCCCATACATTCAATTTTTGGAATGGACATCAGAGCTAGTGAGGGAACTTTAAACAATGCACTTACTCCACCACCGGCGACGCCTGAATTCCCATCCCCTTCTTTGTTTGCAAAGCCAATGACGACGACGTCTGAAAATCTATCGATTTCAGAATCTATGCTTCTCGATGGCAGTAATTTGCATGAACCAGATGATCCCCAGCTGCACCAGCAACAGGAACACCAGCAAAGTAACTCCAACTTTGTGGAGTATCCTTTTAGTTTCCTTTATGGTGGCGAGGCAAACCACCAAGAAGAAGAGGACAAACACAATATCCCAGCACCAATTTACTGTACAGAGGACTTCAACAAATACAGCGCAAGTACCAGTGGAGGCAACAGTGCTAGTTGCACCTGGTATCAGTCACAAAGTAGTGAAAATGATTTCGAGATGGACGGGAAAGGTAGCTACCTTgatttggattcgtgcaagcgAAGTACCTCGTTTGCAGCAGCCACCGAGGGTAGTATGCCAACTTCAGATGCACTGAATATAAGAACAGATGAAAAGATGCCAGCAAAAGGCGAGATCTCAGAACAAGAGAGCAATTGTGGCGTGGAGAATTCATGGAGCCAACCGctttaCAATGAATTTGCTGTTCGTTTCCCAAATCCTTATCAAAATTTCATGTCAAACCACGAGAGCTGGAGCCAAGATCATTACTTTCGCCCTCAGGACTTGAGTTCATCGGTTGAAACGAAAAatttcccTTTGCGTTCAATGGAAGAACCTTCGGCAGTTATTGACGCACTTCCATCCACATCTAAACGAAAAATTAAAGAAGCGATAGCAAAAGTTCCTCGCAAGAAGAACTTCCAGTGCACCCACTGCAACACACACTTTCCACTGCTTAAAGAGAAGAACGCACATATGATAAAACAACACGGTTACAAACGTGTTAACCGCCGACTGATTCGTGACCCACCGACTTCAACTGTTACCACAGCAACTCTGAATGCAGTTGACCCCACTGGAGCTGCTTCTTTGCTGCTGGGCTTAGATGGAGATACACCACCGTCTTTGCCAGTTGACGAAGATGAAGACTCTAAAGCGGCGATTGTTAAAATCGAACAAGAAAACCAAgattgcaaaaacaaaaatctaccCAATATAGCAATAAGTAGCAAAAAAGTTACTTCTTCCTCGTCGGCGGCAAACAGTGCAACAAATGCTTCGCGCACTAAGTATGACTCGATGCGAGCACGAGACAATCGAATGCTTATCAACTTCAATTTGAGTGCGCTAAATGTAAAAGACGAAGGCGAAGTGCACAACTATTACTTGGAGTCTAAATCGTCATTTTGCTGCTTCGTTTGCAAGCGGGACTTTCTTACTGTTAAGCTATTTGACGAGCATTTAATTGAACATCCCGCCGAATGCTTTACATGTCACAAAAAGTTCACTAGATGGAAAAACTTTATGGTTCATCTAAAGCGGCATCTGGGTTGGAAAGACTTTGCATGCACTTATTGTGAAAAGAAGTTTGTTATACGTAGCGCTCTGGTGGAACATATGCGAATGCATACTGGTCAGACACCTCTTAAGTGCAAGATCTGTGGGAAGAGCTTCAAGCGTTATTCGAACCTAACACAGCATCGTAAACGACACGGCACCAAAATCAATCGTTCGAAAGAGTACGTTTGTTTTTGCGGTGAAGTTTTACCATCGAAAGCTCGCTTTATCTGGCATAAAGAGACACACGATCTAAAACCGAAATGCTGTCCTTACTGCAGAGATAGATTTGTGCATGCAAATAGCTTGAGACGTCATATACGACTAGCGCACTCCGACAAGTTTGACTACACCGAACCGATGGAGTGTCCCATGTGTAAGCAAATTTATGCCAAATCCAGCATCAAGGCTCACATGGCGACGCACTCAATGGATACGCAACACGAGTGCCTAATTTGCAGCAAATCGTTTAGTACGAAATGGAATTTGAAAATACACAATTGGGTGCACGCCAACCGCACTACAAAGCCCTTCAAGTGTGAGCAGTGTGTAAAGGCCTTTGTGCGCGAGGTCGACTACAACAATCACATCAATTCGCACAAACAGATTAAGCCCTACACTTGCGAACATTGCGGCTGCAAGTTCATCCGCAAATATAACTACATCCGGCACAGACGCGAGCACCACGGAAACAAGAAGTTCACTTGTGACCTCTGCGGCAAGCTCTTCCACCGGCACTATTATCTGATTGAGCATCGGCGTATCCACACTGGCGAACGACCATTCCAGTGTACGATATGTGGCAAGAGTTCCACAACAAAGACTAACCACAACAAACATCTGAAGATTCATCATTCACGGGATCCGTTCACCTCGGAGGCGTAa
Protein Sequence: MGGNVQCPVCTLFLLPGMNLSDHLETHPKEQVIKALVQMSLKSETSETTTTPDTPKKANKTSFSEPDETSHLATEDERASPISEISGSDSAPGMVEPETTKRTEKESNNTMLQSAPPLNVLNRQGEYIFENNSSSSNSSTFFGPPNPYYHHQQQQQHNHHHHHQQLQHQQQQQQQQQQQQQHHQQQNLHHQQHQQHVNHHNYQPYNGLSHGGNNNFTGHGPTNPPMRLFSYQPTPKPLQPPPAYGAAISQLRSQNSQNLMSNTIHRPLYSPGNYTLSPSASTSASSSSTPSRLPPPLPPPPLNQRYQSNFETMDTVFTDTDDTSAISPRRTSMTPPTRPPPQLYRSPQSSSNAQFSRQSGSPYSVMSGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDEEDELSEHGSNSEDVKLIEDDPPNENWAGGESSDQGQKSERTENSQKKSGITVLSDVQLDLSEYLDLVGNIIASGKVAKNRSELIKVEKFEPEEVKEEDEMRLEDDDEAAVLINNSQKCQATEEQKLQPSNDSAAYCPLPLPSDISKLESCASSSVAPVTTSVIRLAATVNAKTSSLVAPATKIEEPMHEECSNTLTTTKVEEQMEVSYIEDEKPTTSLKIETESTSNSKSFYMDPELVGTSTPTNKTEEVIKATSLENVIPQAPVEDISTHTTDEIPDKTENKEVNSTINSFQQTLKRPIKKGPKKLIIKPKNKDASTSKAITEKTATSINDPTPPIQMPMPIPSTSSENSNPQQQKEEVTTEDCSPQDELNSIKIESLSSVISDPILLRPLLADADEKLPPEDDAQPQPSTSSSIVSAEKQDTEDFQLEGEKPTADLTALIDECLKKEEEEDHPIHSIFGMDIRASEGTLNNALTPPPATPEFPSPSLFAKPMTTTSENLSISESMLLDGSNLHEPDDPQLHQQQEHQQSNSNFVEYPFSFLYGGEANHQEEEDKHNIPAPIYCTEDFNKYSASTSGGNSASCTWYQSQSSENDFEMDGKGSYLDLDSCKRSTSFAAATEGSMPTSDALNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFAVRFPNPYQNFMSNHESWSQDHYFRPQDLSSSVETKNFPLRSMEEPSAVIDALPSTSKRKIKEAIAKVPRKKNFQCTHCNTHFPLLKEKNAHMIKQHGYKRVNRRLIRDPPTSTVTTATLNAVDPTGAASLLLGLDGDTPPSLPVDEDEDSKAAIVKIEQENQDCKNKNLPNIAISSKKVTSSSSAANSATNASRTKYDSMRARDNRMLINFNLSALNVKDEGEVHNYYLESKSSFCCFVCKRDFLTVKLFDEHLIEHPAECFTCHKKFTRWKNFMVHLKRHLGWKDFACTYCEKKFVIRSALVEHMRMHTGQTPLKCKICGKSFKRYSNLTQHRKRHGTKINRSKEYVCFCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICSKSFSTKWNLKIHNWVHANRTTKPFKCEQCVKAFVREVDYNNHINSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975075; iTF_00335428; iTF_00665124; iTF_00664339; iTF_01396821; iTF_00426606; iTF_00894249; iTF_01318547; iTF_00665974; iTF_00984503; iTF_00694944;
90% Identity: iTF_00426606;
80% Identity: -