Basic Information

Insect: Leucozona laternaria
Gene Symbol: -
Assembly: GCA_932273905.1
Location: CAKNZR010000777.1:1006383-1011628[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.074 13 7.8 4.2 1 23 1176 1199 1176 1199 0.97

2 12 0.00026 0.047 15.5 5.3 2 23 1363 1384 1363 1384 0.97

3 12 2.4e-05 0.0044 18.7 0.3 1 23 1390 1412 1390 1412 0.97

4 12 1.6e-07 2.8e-05 25.6 3.6 2 23 1419 1440 1418 1440 0.97

5 12 7.5 1.3e+03 1.5 0.1 6 23 1454 1471 1452 1471 0.95

6 12 0.0081 1.4 10.8 3.4 3 23 1478 1499 1476 1499 0.95

7 12 0.14 26 6.8 0.1 2 23 1510 1530 1509 1530 0.96

8 12 0.0002 0.036 15.8 0.8 1 19 1536 1554 1536 1555 0.96

9 12 0.00013 0.024 16.4 0.4 1 23 1566 1588 1566 1588 0.98

10 12 0.00023 0.04 15.7 9.0 1 23 1594 1616 1594 1617 0.96

11 12 0.0012 0.21 13.4 4.7 1 23 1622 1644 1622 1644 0.98

12 12 0.0015 0.26 13.1 6.0 1 23 1650 1672 1650 1673 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.074	13	7.8	4.2	1	23	1176	1199	1176	1199	0.97
2	12	0.00026	0.047	15.5	5.3	2	23	1363	1384	1363	1384	0.97
3	12	2.4e-05	0.0044	18.7	0.3	1	23	1390	1412	1390	1412	0.97
4	12	1.6e-07	2.8e-05	25.6	3.6	2	23	1419	1440	1418	1440	0.97
5	12	7.5	1.3e+03	1.5	0.1	6	23	1454	1471	1452	1471	0.95
6	12	0.0081	1.4	10.8	3.4	3	23	1478	1499	1476	1499	0.95
7	12	0.14	26	6.8	0.1	2	23	1510	1530	1509	1530	0.96
8	12	0.0002	0.036	15.8	0.8	1	19	1536	1554	1536	1555	0.96
9	12	0.00013	0.024	16.4	0.4	1	23	1566	1588	1566	1588	0.98
10	12	0.00023	0.04	15.7	9.0	1	23	1594	1616	1594	1617	0.96
11	12	0.0012	0.21	13.4	4.7	1	23	1622	1644	1622	1644	0.98
12	12	0.0015	0.26	13.1	6.0	1	23	1650	1672	1650	1673	0.96

Sequence Information

Coding Sequence: ATGGGTGGAAACGTGCAGTGTCCCGTTTGTACACTTTTCCTGCTTCCGGGCATGAATTTGTCAGACCATCTGGAAACCCATCCAAAAGAACAGGTTATAAAAGCTCTGGTTCAAATGAGCCTTAAAACTGAGACATCTGAATCGACGACAACACCGGATACTCCTAAAAAATCCAACAAAACTTCTTTCGCAGAGACCGATGAAACTTCTCATCTGGCCACAGAAGATGAAGGACCTTCTCCGATATCAGAAATCGGTGGCTGTTTAAGTGACAGTGCAACTAGTATGGTGGAACCAGTAACTACAAAACGAACTGAAAAAGAGAGCAATAATTCGTTGCTCCAAGCTGCGCCGACTTCAAATGTATTGAACAGACAAGGTGTTTATATGTTTGAAAATAACAGTAGCAGTAGCAACAGTAGTAGCAGTACTTTCTTTGGACCAACGACTCCATATTATCATCATCAACAACAACAACAACACCAACAACAACATAATCATCATCATCATCAACAAATGCAGCAACAACAGCAGCATCATCAACAACAGCAACAAGATCTTAATCATCAACAGCATCATCAACATGTTAATCATAACTATCAACCTTATCACGGTCTCTCACACGGTGGAAATAACAATTTCACTGGCCACGGGCCAACACATCCCCCAATGCGACTCTTCTCGTATCAACCAACACCCAAGCCATTGCAACCACCACCTGCATATGGCGCCGCCATAAGTCAACTTCGATCTCAAAATAGCCAAAATCTTATGTCAAACACAATTCATCGGCCGTTGTATTCTCCAGGAAACTACACCCTTCCACCATCGGAGTCAATATCAGCATCTTCATCATCGGCACCATCGCGTCTGCCACCCCCACTTCCGCCACCACCTCTCAATCAACGCTATCAGTCAAACTTCGAGACAATGGAAACATCCTTTACTGACGCAGATGATACAAGTGCAATATCTCCAAGGCGAGCTTCGATGACACCACCAATCAGACCTCCTCCCCAACTATATCGTTCACCTCAATCTTCGTCAAATGCCCAATTCAGTAGACAGTCAAGCTCCCCCTACTCAGTTATGTCAGGCTCTCCATCTGTATTGCGATTTGCTGAATCGCCTGTTACAGCGCACTACCTAGAGCGAGAGAATGGTGATTTCATTGTGCAAGAAACACCCAAGCATGTCGTTGAGTGTGTAGAAAAAGACGATGGAGAATTTTCTGTGATCGAGCGAGTCTATCATATGCCACCGAGTGTTGTTCAAATAAATGAAGACGAAGAAGACGAAATGTCCGAACACGGATCGAATAGCGAAGACGTCAAACTGATTGAGGACGATCATCCAAATGAAAATTGGACAAGTGGAGAATCTTCAGATCAGGGACAATCATCAGAGGGGACAGAAAAACCGCAAAAAAAATCTGGTATAACCGTACTCAGTGATGTACAATTAGACTTAAGTGAATATCTAGACCTAATGGGTAATATTATAGCTTCTGGAAAGGTTGCTAAAAATCGATCTGAATTGATAAAGGTTGAAAAATTCGAACCTGAAGAAGTGAAAGAAGAAGAAACAATATGTCTGGATGACAATGATAATAGTGCTGCTTTAATGGACACTGATCACAAATGCGAAGAAACAGAAGAAGATAAATTACAACTTAGTAATGATTCAACGGTGTATTGCCCTAAGCCGTTACCACCGGCTTTGTCAAAGATAGAATCGTGTGCATCATCATTATCAGTGGCTCCAGTGACAACAAGTGTTATTCGACTGGCAGCAACTGTTAATCCAAAACCAACTACACTTGTAGCTCCTGCAACAAAGATTGAAGAACCTATGCATGAAGAATGCTCTAATACACTAACAACGACAAAGGTTGAGGAGCAAATGGAAATAAGTAATGTTGATGAAGAGAAGCCTACAACTAGCCTTAAAATAGAAATAGAATCAACAAGCAATAATAAACCATCTTACATGGATGCGGAATTAGTTGGAACCATCACACCTACAAACAAGACTGAGGAAGCAATACAAACCACAAGCTTAGACAATTTAATACCCCAACCTCCAGTAGAAGATATTATTTCTACACAACCAACAGATGAATTAGCAGAAAAAAATGATAGCAGAGACGTTAATTTACCAATTAATTCGTTCCATCAAACATTGAAGCGGCCATTAAAAAAGGGCCCGAAAAAGCTTATAATTAAGCCAAAAAACAAAGATGCTAGTACATCTCATGCAATTAGAGAAAAGACGGCCACTTCAATCAATGGTTCCACGCCGCCAATTGAAATGCCAATGCCAATACCATCTACCTCGACTGAAACTTCCAATCTGATGCAGCAACAGGAAAAAGAAGAAGTAGCTCCAGAAGATTCCTCACCTCGAGATGAAATGAATAGTATTAAAATAGAAAGTTTATCTTCTGTTACATCGGATCCAATTCTCTTGAGGCCTTTGCTTGCCGACGCTGATGAGAAACTTCCCCCTGAAGACGATGCGCAACCCCAACCCTCAACATCAAGTTCAATAGTTTCAGGAGAGAAACAAGGCACAGAAGAGTTTCATTTAGAAGGTCAGAAACCCACCGCTGATTTAACAGCATTCATTGATGAATGCCTGAAAAAAGAGGAAGAAGAAGAACATCCTATGCATTCAATTTTCGGAATGGACATCAGAGCTACTGAAGAAACTCTAAGCAATGTACTGACTCCACCGCCACCGACTCCTGAATTCCCATCCCCTTCTTTGTTTGCAAAGCCCTTGACAACAACGACGTCTGAAAATCTATCGATTCCAGAATCTATGCTTCTTGATGGGAGTAATTTACATGAACCAGATGATCACCAACTGCACCACGACCAGCAGCAGGAACATCAGCAAACTAACTCCAACTTTGTGGAGTATCCCTTTAGTTTCCTTTATGGTGGCGAAGCAAATCACCAAGAAGAGGAGGACAAACACAATATTCCAGCACCAATTTACTGTACGGAGGATTTCAACAAATACAGCGTTAGTACAAGTGGAGGTAACAGTGCTAGTTGCACCTGGTATCAGTCACAAAGCAGTGAAAATGATTTCGAGATAGACGGCAAAGGTAGCTACCTTGATTTAGATTCGTGCAAGCGAAGTACCTCGTTTGCAGCCGCCACCGAGGGAAGTATGCCAACTTCCGATGCACTTAACATTAGAACAGATGAAAAGATGCCAGCAAAGGGTGAGATCTCAGAGCAAGAGAGTAATTGTGGTGTAGAGAATTCATGGAGCCAACCACTTTACAATGAGTTTGCTGTTCGTTTTCCAAACCCTTATCAAAATTTCATGTCTAATCACGAGAGCTGGAGCCAAGATCATTACTTTCGTCCCCAGGATTTAAGTTCACCTGTAGAAATAAAAAATTTCCCTTTGCGTTTAACGGAAGAACCTTCGGCAATTATTGACGCGCTTCCGTCTACATCAAAGCGAAAGACTAAAGAAGCAATAGCAAAATTGCCGCGCAAGAAGAACTTCCAGTGTACCCACTGCAACACACACTTTCCACTGCTTAAAGAGAAGAACGCACATATGATAAAACAACATGGTTATAAGCGTGTTAACCGTCGACTGATTCGTGACCCACCGACGTCAACTGTTACTACGGCAACTTTGAATGCAGTTGACCCCGCTGGAGCTGCTTCTTTGTTACTGGGCCTGGATGGTAATGCACCACCCTCCTTGCCAGTTGGCGAAGATGAAGACTCCAAAGCGGCGATTGTTAAAATCGAACAAGAAAACCAAGATTGCAAGAATAAAAATCTTTCCAACTTGGCAATAAGTAGCAAAAAAGTTACTTCTTCCACATCGGCGGCAAACAGTGCAACAAATGTATCACGCACTAAGTTTGACTCGATGCGTGCACGAGATAATCGAATGCTTATCAACTTCAATTTGAGTGCGCTAAATGTAAAAAATGAAGGCGAAGTGCACAACTATTATTTGGAGTCAAAATCGTCATTTTGCTGTTTCGTTTGCAAGCGGGACTTTCTTACTGTTAAGCTATTTGACGAGCATTTAGTTGAACATCCCGCCGAATGTTTTACATGTCACAAAAAGTTCACTAGATGGAAAAACTTTATGGTACATCTGAAGCGTCATCTGGGTTGGAAAGACTTTGCATGCACTTATTGTGAAAAGAAGTTCGTCATACGTAGCGCTCTAGTGGAACATATGCGCATGCATACTGGCCAGACACCACTTAAATGCAAGATCTGTGGAAAGAGCTTCAAGCGTTATTCGAACCTTACACAGCATCGAAAGCGACATGGCACCAAAATCAATCGTTCAAAAGAGTACGTTTGTTTTTGCGGTGAGGTTTTACCATCGAAAGCTCGCTTTATCTGGCATAAAGAGACGCACGATCTAAAGCCAAAATGCTGCCCTTATTGCAGAGATAGGTTTGTGCATGCAAATAGTTTGAGACGTCATATACGACTAGCGCACTCTGATAAGTTTGACTACACCGAACCAATGGAGTGTCCCATGTGTAAGCAAATCTATGCCAAATCCAGCATCAAGGCCCACATGGCGACGCACTCAATGGATACGCAACACGAGTGCCTCATTTGCAGCAAATCATTTAGTACGAAATGGAATTTAAAGATTCACAATTGGGTGCACGCCAATCGCACCACAAAACCCTTTAAGTGTGAGCAGTGTGTAAAGGCGTTTGTGCGCGAGGTCGACTACAACAATCACATCAATTCGCACAAACAAATCAAGCCCTACACTTGCGAGCATTGCGGCTGCAAGTTTATCCGCAAATATAACTACATCCGGCACAGACGCGAGCACCATGGAAACAAAAAGTTCACCTGTGATCTCTGCGGCAAGCTCTTCCACCGGCACTACTATCTGATCGAACATCGGCGCATCCACACTGGTGAACGACCATTCCAGTGTACAATTTGTGGCAAGAGTTCCACAACAAAGACTAACCACAACAAACATCTGAAGATTCATCATTCACGGGATCCGTTCACCTCGGAGGCGTAA
Protein Sequence: MGGNVQCPVCTLFLLPGMNLSDHLETHPKEQVIKALVQMSLKTETSESTTTPDTPKKSNKTSFAETDETSHLATEDEGPSPISEIGGCLSDSATSMVEPVTTKRTEKESNNSLLQAAPTSNVLNRQGVYMFENNSSSSNSSSSTFFGPTTPYYHHQQQQQHQQQHNHHHHQQMQQQQQHHQQQQQDLNHQQHHQHVNHNYQPYHGLSHGGNNNFTGHGPTHPPMRLFSYQPTPKPLQPPPAYGAAISQLRSQNSQNLMSNTIHRPLYSPGNYTLPPSESISASSSSAPSRLPPPLPPPPLNQRYQSNFETMETSFTDADDTSAISPRRASMTPPIRPPPQLYRSPQSSSNAQFSRQSSSPYSVMSGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDEEDEMSEHGSNSEDVKLIEDDHPNENWTSGESSDQGQSSEGTEKPQKKSGITVLSDVQLDLSEYLDLMGNIIASGKVAKNRSELIKVEKFEPEEVKEEETICLDDNDNSAALMDTDHKCEETEEDKLQLSNDSTVYCPKPLPPALSKIESCASSLSVAPVTTSVIRLAATVNPKPTTLVAPATKIEEPMHEECSNTLTTTKVEEQMEISNVDEEKPTTSLKIEIESTSNNKPSYMDAELVGTITPTNKTEEAIQTTSLDNLIPQPPVEDIISTQPTDELAEKNDSRDVNLPINSFHQTLKRPLKKGPKKLIIKPKNKDASTSHAIREKTATSINGSTPPIEMPMPIPSTSTETSNLMQQQEKEEVAPEDSSPRDEMNSIKIESLSSVTSDPILLRPLLADADEKLPPEDDAQPQPSTSSSIVSGEKQGTEEFHLEGQKPTADLTAFIDECLKKEEEEEHPMHSIFGMDIRATEETLSNVLTPPPPTPEFPSPSLFAKPLTTTTSENLSIPESMLLDGSNLHEPDDHQLHHDQQQEHQQTNSNFVEYPFSFLYGGEANHQEEEDKHNIPAPIYCTEDFNKYSVSTSGGNSASCTWYQSQSSENDFEIDGKGSYLDLDSCKRSTSFAAATEGSMPTSDALNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFAVRFPNPYQNFMSNHESWSQDHYFRPQDLSSPVEIKNFPLRLTEEPSAIIDALPSTSKRKTKEAIAKLPRKKNFQCTHCNTHFPLLKEKNAHMIKQHGYKRVNRRLIRDPPTSTVTTATLNAVDPAGAASLLLGLDGNAPPSLPVGEDEDSKAAIVKIEQENQDCKNKNLSNLAISSKKVTSSTSAANSATNVSRTKFDSMRARDNRMLINFNLSALNVKNEGEVHNYYLESKSSFCCFVCKRDFLTVKLFDEHLVEHPAECFTCHKKFTRWKNFMVHLKRHLGWKDFACTYCEKKFVIRSALVEHMRMHTGQTPLKCKICGKSFKRYSNLTQHRKRHGTKINRSKEYVCFCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICSKSFSTKWNLKIHNWVHANRTTKPFKCEQCVKAFVREVDYNNHINSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00427562;
90% Identity: iTF_00664339;
80% Identity: -