Mqua039366.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- -
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:450037708-450043105[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.092 24 7.7 4.2 1 23 1227 1250 1227 1250 0.97 2 12 0.00032 0.084 15.4 5.3 2 23 1414 1435 1414 1435 0.97 3 12 3e-05 0.0078 18.7 0.3 1 23 1441 1463 1441 1463 0.97 4 12 1.9e-07 5.1e-05 25.6 3.6 2 23 1470 1491 1469 1491 0.97 5 12 9.2 2.4e+03 1.4 0.1 6 23 1505 1522 1503 1522 0.95 6 12 0.01 2.6 10.7 3.4 3 23 1529 1550 1527 1550 0.95 7 12 0.18 47 6.8 0.1 2 23 1561 1581 1560 1581 0.96 8 12 0.00025 0.065 15.8 0.8 1 19 1587 1605 1587 1606 0.96 9 12 0.00016 0.043 16.4 0.4 1 23 1617 1639 1617 1639 0.98 10 12 0.00028 0.073 15.6 9.0 1 23 1645 1667 1645 1668 0.96 11 12 0.0015 0.39 13.4 4.7 1 23 1673 1695 1673 1695 0.98 12 12 0.0018 0.48 13.1 6.0 1 23 1701 1723 1701 1724 0.96
Sequence Information
- Coding Sequence
- atgggTGGAAACGTGCAATGTCCCGTTTGTACACTTTTCCTGCTTCCGGGCATGAATTTGTCGGACCATCTGGAAACCCATCCAAAAGAACAGGTCATAAAAGCCTTGGTTCAAATGAGCCTTAAAACTGAGACATCTGAATCGACGACACCAgatacttcaaaaaaaaacaacaataataactCTTTCTCAGAGGCCGATGACAATTCTCATCTGGGCACAGAAGATGAAAGAGCTTCACCAATTTCGGAAATAAGTGGTAGTGTAAGTGACATTGCCCCATGTATGGTGGAACCAGCAACTACAAAACGAACTGACAAAGAGAGCGACAATACGTTGCTACAAGCTGCGCCGCCTTCAAATGTATCAAACAGACAAGGTGGATATATGTTTGAAAataacagcagcagcagcaacagtaGCAATAGTACTTTCTTTGGACCACCGACTCCATACTATcatcaacaacagcaacataatcatcatcatcatcaacaactgcagcaacaacagcatcatcaacagcagcaacaaaataTACATCATCAACAGCATCAGCAACATGTTAATCATAACTATCAACCCTATCACGGTCTCTCACACAGTGGAAATAACAATTTCACTGGTCACGGACCAACACATCCTCCAATGCGACTCTTCTCCTATCAACCACCACCCAAGCCATTGCAACCACCACCTGCATATGGAGCCGCCATAAGTCAACTTCGATCTCAAAATAGCCAAAATCTAATGTCAAACACAATTCATCGGCCGTTGTATTCTCCAGGAAACTATACCCTACCACCATCGTCATCAACAGCTTCTTCTTCAACGACTGCATCTCGTCTGCCTCCACCGCTTCCACCACCACCTCTTAACCAACGCTATCAGTCGAACTTCGAGACAATGGAAACATCCTTTACTGACACAGAAGATTCAAGTGCAATATCTCCTAGGCAAACTTCAATGACACCACCAACCAGACCACCTCCTCAATTATATCGTTCACCACAATCATCATTAAATGGCCAATTCAATAGACAGTCAAGCTCTCCCTACTCAGTTATGTCGGGCTCTCCATCCGTATTGCGATTTGCTGAATCGCCTGTGACAGCGCACTATCTAGAGCGAGAGAATGGTGATTTCATTGTGCAAGAAACACCCAAGCATGTTGTGGAGTGTGTAGAGAAAGACGATGGAGAATTTTCTGTGATCGAGCGAGTCTATCATATGCCACCGAGTGTTGTTCAAATAAATGAAGACGATGAAGACGAATTGTCCGAACATGGATCAAATAGTGAAGATGTCAAATTGATTGAGGACGATCATCAAAATGAAAATTGGACAAATGGAGAATCCTCGCATCAGGGACAATTATCAGACATAacagacaaaacacaaaagaaatctggtaTAACCGTACTCAGCGATGTACAATTAGACTTAAGTGAATATCTAGACCTAATGGGTAACATTATAGCTTCTGGGAAGGTTGCTAAAAATCGATCTGAATtgataaaagttgaaaaattcgaACCGGAAGAAGTGAAAGAAGAAGAAACAATATGTCTGGATGACGATGAAAATGAGAATGCTGGTGAATTGATGATCACCAATAATGAAGAATGTGACGAGACAGAACAGAAACTAGAAATTAGTAATGAGTCGACGGCGTACTGCCATTTGACGTTACCATCGGCTTTTTCAAAGTTAGAATCGTGTGCATCGTCATCTTCAGTAGCTCCAGTCACAACAAGTGTTATCCGACTGGCGGCAACTGGTAATGCAAAAACAAGTACACTTCCAGCAGCTGCAACAAGGATTGAGGAGCCTATCCATGAAGAACCCTCTAAAAAGCATCTAACAACGAAAAAGGTTGAGGAACAAATGGAAGTAAGTAATTTTGAGGGAGAGAACCCTACCACTAGCcttaaaatagaaatagaatcAACAAGCAATAGCAAATCATCTTATATGGATGTGGAATTTGTTGGAACCAGTACACCTGCAAACAAGACTGAGGAAGCAATACAAGCAACAAGTTTAGACAATTTAATACCCCAAGCTCCAGTAGAAGCTATTTCTACACAACTCCCAATAGATGAAATACCGgacaaaactgaaaacaaagaCGTTAATTTACCAATTAATTCGTTCCATCAAACATTGAAGCGGCCAATAAAGAAGGGTCCGAAAAAGCTTATAATTAAGCCAAAAAACAAAGATGCTAGTACATCACAAGCAATTACAGAAAATACAGCAGTTTCAACCAATGATCCGCCAATTGAAATGCCATTGCCAATACCATCTACCTCGGCTGAAGCTTCCAATctgcaacagcagcagcaaaaccaagaacaacaacaacaccaagaacaacaacaacaccaagaacaacaacaacaacaagaacaacaaaaagaacaacaacaacaacaacaacaagaacaacaacaacaccaacaagaacaacaacaacatcaacaacaacaccaccaccaccaacaacaccaacaacaaaagGAAGTACTACCGACAGAAGACTCCTCACCTCGGGATGAACTGAATAGTATTaagatagaaaatttatctTGTGTTACATCGGATCCAATTCTCTTGAGGCCTTTACTTGCCGACGCTGATGAAAAACTTCCTCCTGAAGATGATGCACAACCCCAACCCTCAACATCAAGTTCAATAGTTTCAGAAGACACGAAACTAATTACGGaagattttaatttggaagagCAGAAACCCACCACCGATATAACAGCATTAATTGATGAGTGTCTAAAAAAAGAGGAAGAAGAAGACCATCCAATGCattcaatttttggaatggaTATCGGAGCTACTGAGGGAACTCTAAACAATGCATTGAATCCACAACCACCGGCACCTGAATTTCCATCCTCTTCTTTGTTTGCAAAGCCATTAGCAACGACAACATCTGAGAATCTATCGATTCCAGAATCTATGCTTCTCGATGGTAGTAATTTGCATGAACCAGATGATCACCAACTACACCACCACCAGCAGCAGGAGCACCAGCAAAGTAATTCCAACTTTGTTGAGTATCCGTTTAGCTTCCTTTATGGTGGCGAGGCAAATCACCAAGCAGAGGAGGACAAACACAATATTCCAGCACCAATTTACTGTAATGAAGACTTCAACAAATACAGCGTAAGTACAAGTGGAGGCAATAGTGCTAGTTGCACCTGGTACCAGTCACAAAGCAGTGAAAATGATTTCGAGATAGACGGAAAAGGTAACTACCTTGATTTGGATTCGTGCAAGCGAAGTACCTCGTTTGCAGCCGCCACCGAGGGCAGTATGCCAACTTCAGATGCACTAAACATCAGAACAGACGAAAAAATGCCAGCAAAGGGTGAGATATCAGAACAAGAGAGTAATTGTGGTGTAGAAAATTCATGGAGCCAACCGcttTACAATGAGTTTGCTGTTCGTTTCCCAAATCCTTATCAAAATTTCATGTCAAATCACGAGAGCTGGAGTCAAGATCATTATTTTCGTCCGCAGGATCTGAGTTCATCTGTTGAATCAAAAAAtttcccTTTACGTTCAACGGAAGAGCCCTCGGCAGTTATTGACGCACTTCCATCTACTTCAAAGCGAAAGCCTAGAGAAGCGATAGCAAAATTACCGCGCAAGAAGAACTTCCAGTGTACCCACTGCAACACACACTTTCCACTGCTTAAAGAGAAGAACGCACATATGATAAAACAACACGGTTATAAGCGTGTTAACCGCCGACTGATTCGTGACCCACCGACGTCAACTGTTACTACAGCAACTCTGAATGCAGTTGAACCAGCTGGAGCTGGCTCTTTGTTACTGGGCTTGGATGGAACTGCAGCATCATCTCTGCCAGTTGGCGAAGATGAAGACTCTAAAGCGGCGATTGTTAAAATTGAACAAGAAAACCAAGATtgcaagaacaaaaattcatCAAACTTGGCAATAAGTAGCAAAAAAGTTACTTCCTCCTCATCGACGGCAAACAGTGCGACAAATCTATCCCGCACTAAGTATGACTCGATGCGGGCACGAGATAATCGAATGCTCATCAACTTCAATTTGAGTGCGCTAAATGTAAAAAATGAAGGGGAGGTGCACAACTATTACTTGGAGTCTAAATCGTCATTTTGCTGTTTCGTTTGCAAGCGGGACTTTCTTACTGTTAAGCTATTTGACGAGCATTTAGTTGAGCATCCCGCCGAATGTTTTACATGTCACAAAAAGTTCACTAGGTGGAAAAACTTTATGGTTCATCTCAAGCGTCATTTGGGTTGGAAAGACTTTGCATGCACTTATTGTGAAAAGAAGTTTGTCATACGTAGCGCTCTGGTGGAGCATATGCGAATGCATACTGGCCAGACACCACTTAAATGCAAGATCTGTGGAAAGAGCTTCAAGCGTTATTCGAACCTAACACAGCATCGTAAACGACATGGCACCAAAATCAATCGTTCGAAAGAGTATGTTTGTTTTTGCGGTGAGGTTCTACCATCGAAAGCTCGCTTTATCTGGCATAAAGAGACACACGACCTAAAGCCAAAATGCTGCCCCTACTGCAGAGATAGATTCGTGCATGCGAATAGTTTGAGACGGCATATACGACTAGCGCACTCCGATAAGTTTGACTACACCGAGCCCATGGAGTGCCCCATGTGTAAGCAAATTTATGCAAAATCCAGCATCAAGGCTCACATGGCGACGCACTCAATGGACACGCAACACGAGTGCCTAATTTGCAGCAAATCATTTAGTACTAAATGGAATTTAAAGATACATAATTGGGTGCACGCCAATCGCACTACAAAGCCCTTCAAGTGTGAGCAGTGTGTAAAGGCGTTTGTGCGTGAGGTCGACTACAATAATCACATCAATTCGCACAAACAAATCAAACCCTACACTTGCGAACATTGCGGCTGCAAGTTTATCCGCAAGTATAACTATATCCGGCACAGACGCGAGCACCACGGCAACAAAAAGTTCACCTGTGATCTCTGCGGCAAGCTCTTCCACCGGCACTACTATCTGATCGAGCATCGGCGCATCCACACTGGCGAACGACCATTCCAGTGTACGATATGTGGCAAGAGTTCCACAACAAAGACTAACCATAACAAACATCTGAAGATTCATCATTCACGGGATCCGTTCACATCGGAGGCGtaa
- Protein Sequence
- MGGNVQCPVCTLFLLPGMNLSDHLETHPKEQVIKALVQMSLKTETSESTTPDTSKKNNNNNSFSEADDNSHLGTEDERASPISEISGSVSDIAPCMVEPATTKRTDKESDNTLLQAAPPSNVSNRQGGYMFENNSSSSNSSNSTFFGPPTPYYHQQQQHNHHHHQQLQQQQHHQQQQQNIHHQQHQQHVNHNYQPYHGLSHSGNNNFTGHGPTHPPMRLFSYQPPPKPLQPPPAYGAAISQLRSQNSQNLMSNTIHRPLYSPGNYTLPPSSSTASSSTTASRLPPPLPPPPLNQRYQSNFETMETSFTDTEDSSAISPRQTSMTPPTRPPPQLYRSPQSSLNGQFNRQSSSPYSVMSGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDDEDELSEHGSNSEDVKLIEDDHQNENWTNGESSHQGQLSDITDKTQKKSGITVLSDVQLDLSEYLDLMGNIIASGKVAKNRSELIKVEKFEPEEVKEEETICLDDDENENAGELMITNNEECDETEQKLEISNESTAYCHLTLPSAFSKLESCASSSSVAPVTTSVIRLAATGNAKTSTLPAAATRIEEPIHEEPSKKHLTTKKVEEQMEVSNFEGENPTTSLKIEIESTSNSKSSYMDVEFVGTSTPANKTEEAIQATSLDNLIPQAPVEAISTQLPIDEIPDKTENKDVNLPINSFHQTLKRPIKKGPKKLIIKPKNKDASTSQAITENTAVSTNDPPIEMPLPIPSTSAEASNLQQQQQNQEQQQHQEQQQHQEQQQQQEQQKEQQQQQQQEQQQHQQEQQQHQQQHHHHQQHQQQKEVLPTEDSSPRDELNSIKIENLSCVTSDPILLRPLLADADEKLPPEDDAQPQPSTSSSIVSEDTKLITEDFNLEEQKPTTDITALIDECLKKEEEEDHPMHSIFGMDIGATEGTLNNALNPQPPAPEFPSSSLFAKPLATTTSENLSIPESMLLDGSNLHEPDDHQLHHHQQQEHQQSNSNFVEYPFSFLYGGEANHQAEEDKHNIPAPIYCNEDFNKYSVSTSGGNSASCTWYQSQSSENDFEIDGKGNYLDLDSCKRSTSFAAATEGSMPTSDALNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFAVRFPNPYQNFMSNHESWSQDHYFRPQDLSSSVESKNFPLRSTEEPSAVIDALPSTSKRKPREAIAKLPRKKNFQCTHCNTHFPLLKEKNAHMIKQHGYKRVNRRLIRDPPTSTVTTATLNAVEPAGAGSLLLGLDGTAASSLPVGEDEDSKAAIVKIEQENQDCKNKNSSNLAISSKKVTSSSSTANSATNLSRTKYDSMRARDNRMLINFNLSALNVKNEGEVHNYYLESKSSFCCFVCKRDFLTVKLFDEHLVEHPAECFTCHKKFTRWKNFMVHLKRHLGWKDFACTYCEKKFVIRSALVEHMRMHTGQTPLKCKICGKSFKRYSNLTQHRKRHGTKINRSKEYVCFCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICSKSFSTKWNLKIHNWVHANRTTKPFKCEQCVKAFVREVDYNNHINSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00427562;
- 90% Identity
- -
- 80% Identity
- -