Basic Information

Insect: Dasypolia templi
Gene Symbol: lrrfip2
Assembly: GCA_963555695.1
Location: OY743153.1:3217093-3232013[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.036 7.2e+02 1.0 0.3 43 91 53 102 36 107 0.83

2 5 3.1e-69 6.2e-65 221.2 13.2 1 223 122 345 122 349 0.93

3 5 0.0016 32 5.4 0.1 196 223 355 382 345 388 0.84

4 5 4.3e-17 8.6e-13 50.0 3.8 196 298 392 486 382 488 0.81

5 5 3 6.1e+04 -6.1 11.3 123 167 510 554 491 562 0.65

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.036	7.2e+02	1.0	0.3	43	91	53	102	36	107	0.83
2	5	3.1e-69	6.2e-65	221.2	13.2	1	223	122	345	122	349	0.93
3	5	0.0016	32	5.4	0.1	196	223	355	382	345	388	0.84
4	5	4.3e-17	8.6e-13	50.0	3.8	196	298	392	486	382	488	0.81
5	5	3	6.1e+04	-6.1	11.3	123	167	510	554	491	562	0.65

Sequence Information

Coding Sequence: ATGGGACAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGGGACGCCTTCACTGACGGAGATTTTGGTGATTCCGATGACGAGACTATCGTCGAACGCCTTGATGAAGCCAAGCCTGCTCACATACCGATCACTGAAGCTGTAAAAGATGATATTCAGAATAGTGCAGCTACTAATGGTCACTCTAATGGTATTGTAGATGAGCAGCCCAGAATGAATGGCCGTAAAAATAGTGAAGCTCATTCGAGTGATGTGGAAAACCAAAGCTTAGTGTTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCTATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAGAGGTTAGCAGCGCGACGAGCAGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCGTACGATATGTATTCCGGCAAGACACCAGAGATGGTGGGTCGACGCGGCGCGACGAGGCTGACGGCACTCAGCCCGGCCGTGCACTCACCGAGGCGAAGCTCGGAAGACTCCGTTGATGATGGCTTCAGTATCAAGGATCTTAGGCATGAGTTGAAAGAGGTGGAGGAAAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGTTGGACAACGACAAGGCCGCGCTCGGCTATCAGCTGGAGCTGCTCAAGGACAGGATAGAGGAGCTGCACGAGGAATACGCGCAGCTGCAGCGCGAACACAAAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGAGAACACGAGTCCGTAACTCGCGAGCTTAGCGCGGCACGGGACGCGGTGCGAGCGCGAGACGCGGCGGCGGCCGGCGCGGGCTTCGCCTTTGTGGACGCGGCGGCGCTCGACGCGGCGGCGCGGGACACTGCGGGGGCCGCGGTGGGGGCCGTGCCCGCGCTCGCGTTAGTGACCCACCAGGCGCATCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGATGCGGCGGCGCGGGACACTGCGGGGGCCGCGGTGGGGGCCGTGCCCGCGCTCGCGTTAGTGACCCACCAGGCGCATCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGATGCGGCGGCGCGGGACACTGCGGGGGCCGCGGTGGGGGCCGTGCCCGCGCTCGCGTTAGTGACCCACCAGGCGCATCAGCTGCTCAATGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAGAAGCTGTTAACCTCGAAGCAGGCGTTGGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAACGAAGAACGCGCCGTGAGACAGAACGGAGTCGCCAACCATCACGACCAAGACTACGAGAATGAACTGGAAACAGTCCGTAAGGCGGTGTCGGACGCGAAGGGCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCGCATGTGGCGCGGCTGGAGGCGCAGCTGGCGCGGCTGCGGGCGCGGCAGGACCTGCAGGACGACCACGAGGAGCAACTCAAGCAGGAgcggcggaaattgcagagAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGATAAACTCAAGAACGCGAAGTCTGCACTCCTCAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPAHIPITEAVKDDIQNSAATNGHSNGIVDEQPRMNGRKNSEAHSSDVENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSGKTPEMVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAVRQNGVANHHDQDYENELETVRKAVSDAKGRAARAEAEAALQAAHVARLEAQLARLRARQDLQDDHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_01527251; iTF_00951857;
80% Identity: -