Basic Information

Insect: Xanthia togata
Gene Symbol: lrrfip2
Assembly: GCA_963853775.1
Location: OY970802.1:3428778-3442222[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.023 4.2e+02 1.6 0.6 39 91 49 102 36 107 0.82

2 5 2.6e-69 4.9e-65 221.4 13.0 1 223 122 345 122 349 0.94

3 5 0.0016 31 5.4 0.1 196 223 355 382 345 387 0.84

4 5 5.3e-17 1e-12 49.6 4.3 196 297 392 485 382 488 0.81

5 5 3 5.6e+04 -7.6 15.4 1 48 484 530 484 562 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.023	4.2e+02	1.6	0.6	39	91	49	102	36	107	0.82
2	5	2.6e-69	4.9e-65	221.4	13.0	1	223	122	345	122	349	0.94
3	5	0.0016	31	5.4	0.1	196	223	355	382	345	387	0.84
4	5	5.3e-17	1e-12	49.6	4.3	196	297	392	485	382	488	0.81
5	5	3	5.6e+04	-7.6	15.4	1	48	484	530	484	562	0.64

Sequence Information

Coding Sequence: ATGGGGCAGCGCTCCGAAGTGGCCACGCCTGACAATAGTGACGAGGAGAGCGGAGACGCCTTCACTGATGGAGATTTTGGTGATTCCGATGATGAGACGATCGTTGAACGCCTTGATGAAGCTAAGCCTGCTGACATACCGATCAATGAAGCTGTAAAAGATGATATTCAGAAGAGTGCGGCTACTAATGGTCACTCTAATGGTAGTGTAGATGAGCAGTCCAGAATCAATGGCCGTAAAAATAGTGAAGCCCATTCGATTGATATGGAAAACCAAAGTTTAGTATTATCGGATTTGCGCCGAGATTCACACGGCGATCAGAATCCTTCAATCGTTGGCATTCTCGGCGATCAGCAGAATCATGCGGAGCAAAGGTTAGCAGCGCGGCGAGCGGCGCGGGCTGAAGCGCGAGAAATACGCATGCGTGAGCTGGAGAGACAGCAGCGCGAACAGGAGGACCATGCGGACAAGGCGTACGATATGTATTCCGGAAAGACACCAGAGGCGGTGGGTCGTCGCGGCGTCACGAGACTGACGGCGCTCAGCCCGGCCGTACACTCCCCGAGACGAAGCTCTGAAGACTCCGTCGATGATGGCTTCAGCATCAAGGATCTTAGGCATGAGTTGAAGGAGGTAGAGGAGAAGTTCCGCAAGGCGATGATCTTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTTGGCTACCAGTTAGAGCTGCTTAAGGACAGGATAGAGGAGTTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAGTGCTCATCATTCGAGCGTCTAAAGCGAGAACACGAGTCCGTAACTCGCGAGCTGAGCGCGGCACGAGACGCGGTGCGAGCGCGAGACGCGGCGGCTGCGGGCGCGGGCTTCGCCTTCGTGGACGCGGCGGCCTTGGACGCGGCCGCGCGGGACACTGCGGGCGCCGCGGTCGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCGCACCAGCTGCTCAACGATGCTGGGGAGGGCACGCTCGACGCGGCCGCGCGGGACACTGCGGGCGCCGCGGTCGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCGCACCAGCTGCTCAACGATGCTGGGGAGGGCACGCTCGACGCGGCCGCGCGGGACACTGCGGGCGCCGCGGTCGGGGCCGTGCCCGCGCTGGCGCTGGTCACGCACCAGGCGCACCAGCTGCTCAACGATGCTGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTGACCTCGAAGCAGGCGCTGGAGTCGGAAGTGCGCAAACTGAAGCTGCAGCTGAATGAAGAACGCGCCGCGCGACAGAACGGAGTCACCAACCATCACGACCAAGAGTACGAGAATGAACTGGAAACAGTCCGCAAATCGGTGGCGGACGCGAAGGgccgcgcggcgcgggcggagGCCGAGGCGGCGCTGCAGGCGGCGCACGTGGCGCGCCTGGAGGCGCAGCTGGCGAGGCTGCGCGCGCGCCAGGAGCACCAGGACGGGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGAGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAATTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCACTCCTGAAAGACCTGTGA
Protein Sequence: MGQRSEVATPDNSDEESGDAFTDGDFGDSDDETIVERLDEAKPADIPINEAVKDDIQKSAATNGHSNGSVDEQSRINGRKNSEAHSIDMENQSLVLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSGKTPEAVGRRGVTRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAAGAGFAFVDAAALDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDAAARDTAGAAVGAVPALALVTHQAHQLLNDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELETVRKSVADAKGRAARAEAEAALQAAHVARLEAQLARLRARQEHQDGHEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00907905;
90% Identity: iTF_00425407;
80% Identity: -