Dvit001277.1
Basic Information
- Insect
- Daktulosphaira vitifoliae
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scaffold442:227749-242207[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-13 5.8e-10 39.2 0.0 4 45 389 430 386 430 0.92
Sequence Information
- Coding Sequence
- ATGACTAACAATCATTTAAACGCGGTTGCCGGACAGGACCAACAGTACTGTCTGCGGTGGAACAACCACCAAACGAACTTGACCAATGTTTTCGTACAGTTGTTTCAGTCTGAGGAGTTCACTGACACGACGCTCTTTTGCGAAGGCGGACCGCCAGTAAAATGCCACAAAATGGTGTTGGCTGCCTGTTCGTCTTACTTCCAATCCGTATTTGCCGAAGTACCCGGCAAGCATTCCGCAGTAGTGCTGAAAGACGTTGGCCACGCTGAAATGAAAGCCATTCTTGACTACATGTACAAAGGCGAGGTGAACATCGCGCACGATCAGCTCGCTGCCCTGCTCAAAGTTGCTGAAATGCTCAAGGTCAAGGGACTGGTACAGGACAATTCGTACCATTCGCCAGCCGCCACAGCCGCCGTCGATGAAGATCGCAACATAATCAGCACCTCGTCGCCAAACCACGTGTCGCCCGACGGCAACACTAGTGCACCCAAAGATTTAGCTATCAACATCAATAACAACAACAATGAGCACAACGGTTCCCCGCCACACAGCACAGGAATCAATCATCAGTCTTCATTCTACAACAAAAATTACTACGGAAAGTCGCCACCGTCGCCACCTCTGTCGGAGCACAGAGCCGGAAGGAGCAACGTACCTATGTGGCCTATACCCGCACTGCAAATGTCCTCGACGCCTGTCACCAACGCCATGTTTGGCGGAACCTATGACACTATGGTAGCTGGATATCCTGGTATGTCACCGTTGCGCCGCAAAAAGTTATCCAGTATGTTAATGGGTCGTGACACTCCAATACTCAGAACTGTTCTTGGCCAAGGCCAAGCTGATTCTTCTCAGCAACTTCCTCCTGCAATGTACAACTCTGAAGCTATGGAACATCATAGACCACAGTCCAATGGGTCGGAACATAGCAGTCAGTTTTCAAAGATCAAAATGGAAGGATCAGAACCTCATTCGCCATACCCTGCTGATATGTCAATGAATGAAGATGAAGAAATTATGAGAGCTGGAAAAATGAACAATTCAACTTCACCTCAGTCAATGTACGGTGATTCAAAAGGTGGCATAGTGACTCCAGGAATTGCTACATACGTCCCGTCTCATAAACCTGAATGGAAACGATACAAGCAATATACCAGACAAGACATTATGTCTGCTATAGATGCTGTTCGAACAGGCATGAGTGCTTTACAAGCTTCTAGAAAATTTGGTGTACCTTCACGAACCCTTTATGATAAAGTGAAAAAGCTTGGAATAACTACGAGTCGTCCCTTTCGCAGGTCTGGAGTGAATAATGGTAATTTAGGTTTTCCTTATGGACTGGGACCAGGCACTAGTGGTGTTATGTTCCCAGGTCAGATGTCTGGACCTGAAGATGAATCTGGTCATTCTTCGGTTATGGAACATGCTACGGCTGGTTTCTTACATCATGCTCTTGGTTTATCAGGAGTTTCCATAAAATCATCTGATCATGAAACATCAAACAATGGACATTCGCCTCGTTCTGAACGAATGGATGATGCTGGTTCACCTTGCAGTCCAGAACTTATCAAATATACTGGGCATAGAGAGGATACACGATCACCAACACCTACAGACAATGATGATCAAGCTCAGGATTTATCTGTGTCTCGTAAGTCAGAATCTTCTATACAAGCAACACCTACGTCAAGAGTTATCATGGCACCTATTAGTCAAACACCATCTGTGCCTATGTTAGCTGCTGGTAATGACGATCGGGACTGA
- Protein Sequence
- MTNNHLNAVAGQDQQYCLRWNNHQTNLTNVFVQLFQSEEFTDTTLFCEGGPPVKCHKMVLAACSSYFQSVFAEVPGKHSAVVLKDVGHAEMKAILDYMYKGEVNIAHDQLAALLKVAEMLKVKGLVQDNSYHSPAATAAVDEDRNIISTSSPNHVSPDGNTSAPKDLAININNNNNEHNGSPPHSTGINHQSSFYNKNYYGKSPPSPPLSEHRAGRSNVPMWPIPALQMSSTPVTNAMFGGTYDTMVAGYPGMSPLRRKKLSSMLMGRDTPILRTVLGQGQADSSQQLPPAMYNSEAMEHHRPQSNGSEHSSQFSKIKMEGSEPHSPYPADMSMNEDEEIMRAGKMNNSTSPQSMYGDSKGGIVTPGIATYVPSHKPEWKRYKQYTRQDIMSAIDAVRTGMSALQASRKFGVPSRTLYDKVKKLGITTSRPFRRSGVNNGNLGFPYGLGPGTSGVMFPGQMSGPEDESGHSSVMEHATAGFLHHALGLSGVSIKSSDHETSNNGHSPRSERMDDAGSPCSPELIKYTGHREDTRSPTPTDNDDQAQDLSVSRKSESSIQATPTSRVIMAPISQTPSVPMLAAGNDDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418407; iTF_00670378; iTF_00670153; iTF_01346378; iTF_01346566; iTF_00340716; iTF_00340492; iTF_01330479; iTF_01330724; iTF_01170003; iTF_01169768; iTF_01432950; iTF_01434181; iTF_01347352; iTF_01346995; iTF_01305465; iTF_01305781; iTF_00135523; iTF_01304324; iTF_00463269; iTF_01304101; iTF_00972966; iTF_00463463; iTF_01033129; iTF_01304777; iTF_00136266; iTF_00136267; iTF_01328527; iTF_00134160; iTF_01329104; iTF_01032274; iTF_01037652; iTF_00136054; iTF_00973174; iTF_01167798; iTF_01304982; iTF_00136055; iTF_00184506; iTF_00134621; iTF_01031869; iTF_01038525; iTF_00184734; iTF_00135231; iTF_01032799; iTF_01167520; iTF_00941786; iTF_00940308; iTF_00308955; iTF_00308756; iTF_00019388; iTF_00018930; iTF_00468863; iTF_00469065; iTF_01499775; iTF_01499567;
- 90% Identity
- iTF_00670378;
- 80% Identity
- iTF_00418407;