Elan021632.1
Basic Information
- Insect
- Eriosoma lanigerum
- Gene Symbol
- bab2
- Assembly
- GCA_013282895.1
- Location
- scaffold:13651781-13654149[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-13 6.3e-10 39.2 0.0 4 45 386 427 383 427 0.92 2 2 6.7 1.7e+04 -3.8 0.2 12 18 452 459 451 459 0.82
Sequence Information
- Coding Sequence
- ATGACTAACAACCATTTGAATACAATTTCTGGACAAGATCAACAATACTGTCTGAGGTGGAATAATCACCGGACAAATCTAACAAATGTATTCGTTCAGTTATTTCAATCGGAAGAGTTTACTGATACTACTTTATTTTGTGAGGGTGGACCGCCGGTCAAATGCCATAAAATGGTATTGGCCGCGTGTTCATCATACTTTCAGTCAGTTTTCGCCGAGGTACCCGGTAAACATTCTGCAGTCGTTCTGAAAGATGTCGGTCACGCTGAAATGAAAGCTATACTCGATTATATGTACAAAGGCGAAGTAAACATTGCCCACGATCAATTGGGTGCTTTGCTGAAAGTTGCTGAGATGCTTAAAGTCAAAGGTCTTGTTCAAGACAACACATATCAACCGCAAAACGCAACGCCCACAGTGGACGAAGATCGCAATATAATTAGCACTTCATCTCCAAATCACGTATCGCCGGACGGTAATACGAGTGCTTCCAAAGATCTCGCCATCAATATTAATAACAACAATGAGCACAACGATTCACCGCCACACAGTACTGGTATTAGCAATCAATCGCCGTTCTACAACAAAAATTATTATGGAAAATCACCACCGTTAAATGACAACAGACCCGGTAGAAGTAATGTTCCGATGTGGCCAATGCCTGCTTTGCAGATGTCTTCAACACCAGTAACCAATACGATGTTCGGAGGTAATTATTATGATGCAATGGTCGCTGGACATCCAGGAATGTCTCCATTGCGTCGTAAGAAACTATCAAGTATGTTGATGGGTCGAGATACGCCGATATTGAGGACTGTACTCGGACAAGGCCAAGCTGATTCTTCACAGCAACTTCCTCCAATAATGTACGGTTCTGAAGCAATCGAACATCACAGACCACAGTCTAATGGATCTGAACACAGCAGCCAATTTTTAAAGATAAAAATGGAAGGATCCGAACCTCATTCTCCATATCCCCCAGATATGTCTATGAACGACGACGAAGAAATGATGAGGATGGGAAAAATGAATAATTCATCTTCACCACAATCAATGTATGGAGATTCAAAAGGTGGTATAGTAACTCCCGGTATTGCAACTTATGTCCCATCTCATAAGCCAGAATGGAAACGATACAAACAGTACACGAGGCAAGATATTATGTCTGCAATCGATGCTGTCCGAACTGGTATGAGTGCATTGCAAGCGTCCCGAAAATTTGGAGTTCCATCTCGAACTCTCTATGACAAGGTGAAGAAACTTGGTATAACTACAAGTCGTCCATTTCGTAGATCGGGAGTCAACAATGGTAGTCTTGGATTTGCATATGGATTAGGTCCAGGTACTAGTAGTGTAATGTTCTCTGGTCAAATGTCTGGTGCTGAAGATGAATCTGGTCATTCTTCATCCATGGCCCACGCAACTGCTGGTTTCTTACATCATGCTCTTGGATTATCTGGAGTATCTATAAAGTCGGATCATGAAACTTCTAACAATGGGCATTCGCCTAGTTCTGATAGAATAGATGATGCAGGCTCACCATGCAGCCCAGAAATAATTAAATATGCTGGACATAGGGAAGACACACGATCACCAACACCGACTGACAATGATGATCAAGCACAAGATTTATCAGTGTCTCGAAAATCTGATTCATCAATGCAAGCAACCCCTACATCTAGAGTTATTATGGCGCCTATTAGTCAAACGCCCTCCGTACCCATGTTGGCTGCTGGTAACGATGATAGGGACTGA
- Protein Sequence
- MTNNHLNTISGQDQQYCLRWNNHRTNLTNVFVQLFQSEEFTDTTLFCEGGPPVKCHKMVLAACSSYFQSVFAEVPGKHSAVVLKDVGHAEMKAILDYMYKGEVNIAHDQLGALLKVAEMLKVKGLVQDNTYQPQNATPTVDEDRNIISTSSPNHVSPDGNTSASKDLAININNNNEHNDSPPHSTGISNQSPFYNKNYYGKSPPLNDNRPGRSNVPMWPMPALQMSSTPVTNTMFGGNYYDAMVAGHPGMSPLRRKKLSSMLMGRDTPILRTVLGQGQADSSQQLPPIMYGSEAIEHHRPQSNGSEHSSQFLKIKMEGSEPHSPYPPDMSMNDDEEMMRMGKMNNSSSPQSMYGDSKGGIVTPGIATYVPSHKPEWKRYKQYTRQDIMSAIDAVRTGMSALQASRKFGVPSRTLYDKVKKLGITTSRPFRRSGVNNGSLGFAYGLGPGTSSVMFSGQMSGAEDESGHSSSMAHATAGFLHHALGLSGVSIKSDHETSNNGHSPSSDRIDDAGSPCSPEIIKYAGHREDTRSPTPTDNDDQAQDLSVSRKSDSSMQATPTSRVIMAPISQTPSVPMLAAGNDDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418207;
- 90% Identity
- iTF_00670378;
- 80% Identity
- iTF_00670378;