Basic Information

Insect: Cynaeus angustus
Gene Symbol: su(Hw)
Assembly: GCA_030157275.1
Location: CM058058.1:26411287-26413961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.4e-05 0.0019 18.8 2.0 1 23 150 173 150 173 0.96

2 13 0.0002 0.016 15.9 1.1 1 23 204 227 204 227 0.94

3 13 1.7e-06 0.00014 22.4 2.7 1 23 233 255 233 255 0.99

4 13 1.1e-05 0.00091 19.9 0.4 2 20 262 280 261 282 0.94

5 13 9.1e-07 7.4e-05 23.3 1.3 1 23 293 315 293 315 0.98

6 13 2.4e-05 0.0019 18.8 0.9 1 23 325 347 325 347 0.98

7 13 7.9e-06 0.00064 20.3 0.4 1 23 353 375 353 375 0.98

8 13 1.5e-05 0.0012 19.4 2.3 1 23 381 403 381 403 0.98

9 13 1e-05 0.00083 20.0 3.5 1 23 409 431 409 431 0.95

10 13 5e-05 0.0041 17.8 3.4 1 23 437 460 437 460 0.97

11 13 3.4e-05 0.0027 18.4 3.2 2 23 467 488 466 488 0.96

12 13 6.2e-07 5e-05 23.8 1.5 1 23 494 516 494 516 0.98

13 13 1.2e-05 0.001 19.7 3.8 2 23 523 545 522 545 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.4e-05	0.0019	18.8	2.0	1	23	150	173	150	173	0.96
2	13	0.0002	0.016	15.9	1.1	1	23	204	227	204	227	0.94
3	13	1.7e-06	0.00014	22.4	2.7	1	23	233	255	233	255	0.99
4	13	1.1e-05	0.00091	19.9	0.4	2	20	262	280	261	282	0.94
5	13	9.1e-07	7.4e-05	23.3	1.3	1	23	293	315	293	315	0.98
6	13	2.4e-05	0.0019	18.8	0.9	1	23	325	347	325	347	0.98
7	13	7.9e-06	0.00064	20.3	0.4	1	23	353	375	353	375	0.98
8	13	1.5e-05	0.0012	19.4	2.3	1	23	381	403	381	403	0.98
9	13	1e-05	0.00083	20.0	3.5	1	23	409	431	409	431	0.95
10	13	5e-05	0.0041	17.8	3.4	1	23	437	460	437	460	0.97
11	13	3.4e-05	0.0027	18.4	3.2	2	23	467	488	466	488	0.96
12	13	6.2e-07	5e-05	23.8	1.5	1	23	494	516	494	516	0.98
13	13	1.2e-05	0.001	19.7	3.8	2	23	523	545	522	545	0.94

Sequence Information

Coding Sequence: ATGGAAGAGGGTTTGAATGTGAAAACAGAGACGCCTCCTctgaaaaatgaagaaacgaTTGTTCTTCAAAATATCCCCATGGAGAATGAGGAGGAAATCCCTATAGTTTTTGGGGACTACATGGACAACAACTCTGATGGAAATCTACACGTTAATAGCGTTCAAGAGGATGTCATTCACACCTACATCATTCAGCAAGATGATTATAACAACATTGAATATGAAGAAACTACAGTTATTGAACAGAGAGTGGACACTGATGATGATGAAACCTCAGAGATCAAAAGAAGTGAACAAAATCCTGATGAAAGTACATCAACAGCTGAAGTTGAAGAATCTAATTCTATGGATTATGAAGAAGAATTTGTTGATGAAGTGGAGCCTGATGATGAACCCGATGATGACCAGCCTGATTATGTGGATCCTCTAGAGTATGAAGGTGGTGACTATGAATGTGATTTGTGTCaccgtaaatttaaaactacagcTGGCTTGAAGAGACACATCACTGTAAACCATGCAGAAGAAGAGGATTTAAAGGATCCTTTAACTTTCCAACTTTGTCCATGCTGTGGAGAACCTGTTGACTCAGCCCACACTaTTGGGGACTTTAAATGTGACAAATGTGACAAGCTCTTTGTTCAACAGAACAGTTTAGACCGCCACTTCAGCATAGAGCACTGTGAAGGAGAAATCTTTAAATGTGTGGAatgtaaaaaagattttaagcaGAAAGAGCACCTCATTGAGCACATGAAGGTTCATCCTTTATCTAAATGCATCAAATGCCCCGATTGTAGTAGAGAGTTTACCAGGAAATACCATTTAGATAGACATATTGCTCAGACTGGATGTAATGGAGCACCTAGAAAACAGTTTGTTTGCAAGGTTTGTAATAAAGTGTTCCACCGCAAAGACAACTTGGCTGACCATTTGAGAGCTCATGCAGGACAAGggaaaagaaagaaagtgTTCATATGTGAATACTGTCAGAAGGAATTCCATGGTTCTGCTTTGCTCAATATTCATATTAGAACACACACAGgtgAAAAACCATATGCGTGTGATTTGTGTCCAAAGAAATTTCCTTCTAGTGGGGCGATGAAAAAACATAGAAGGATGCACACGGGCGAGAGACCTTATGCCTGTAAAGAGTGTCACAACCGCTTCGCTGCTAAAGAAACCCTCAATCGCCACATGCGCACTCACACTGGAGAAAAACCCCATTCATGTCAGTTTTGTGGAAAATCCTTCATTCAAGCTTCCCAACTTCGTGCCCACATTTTCCACCACACTGGCGAAAACGCATACACTTGCCCTCACTGCAACAGAGCATTTAACAGAAAACTGCGATTAACAACTCATATTAAATACATGCACGAGGGAGCAGAACCAATGTCCTGCTCTCATTGCGACAAAACATTCTTCAGAAAGGAAGATTTGGCTCGCCATTTCTTATCACACACTGGAGAGAGACCTTTTGAATGCGATGTGTGCCACAAATCTTTCGCCGTGAAATCGTCACTGAAAATTCACCAACTGACTCATCGCAAAGAGCCCCCATGTAGCTGCGATACATGCGGGCGTGCTTTTATCCGTCAAGATTGCTTAATGCGTCATATGAGAGCTCGCCATAGAGATGTTCTTGAAGATATCATGGCAAGTGCTGAGAAGAAAAGATTACAACAGCAGTTGTTGAACGCGGCGACTGAAGCTGTGGCGAAGAATCAAGGAAGTTTGACAGAGAATATGATTTGGAACGAATTAACTTTGACTGAGTCTATTAAAGAGTTGTTGACGATTTTGGTGGATGAGGCTTGTTTACAAGATTTTGGATTCCCGGATGCTCCCGTTGATAAGATTTTAGACTCTGTTATTAAGAGATGTGGGCACAAACCGGCGTCGGAGGAAGATTTCGATTATATTGGAAGAATGAGAGAAAACGCCAAATTGTTGTTTACTGTTGTCATTGATGATGAAGCTGTAAAATCGCTGCTAAACAATCAGACAGTGGATGAGGTGATATTGCATGTTTTGAGGCTAGCAAAAGCCGAGAGTACTTAG
Protein Sequence: MEEGLNVKTETPPLKNEETIVLQNIPMENEEEIPIVFGDYMDNNSDGNLHVNSVQEDVIHTYIIQQDDYNNIEYEETTVIEQRVDTDDDETSEIKRSEQNPDESTSTAEVEESNSMDYEEEFVDEVEPDDEPDDDQPDYVDPLEYEGGDYECDLCHRKFKTTAGLKRHITVNHAEEEDLKDPLTFQLCPCCGEPVDSAHTIGDFKCDKCDKLFVQQNSLDRHFSIEHCEGEIFKCVECKKDFKQKEHLIEHMKVHPLSKCIKCPDCSREFTRKYHLDRHIAQTGCNGAPRKQFVCKVCNKVFHRKDNLADHLRAHAGQGKRKKVFICEYCQKEFHGSALLNIHIRTHTGEKPYACDLCPKKFPSSGAMKKHRRMHTGERPYACKECHNRFAAKETLNRHMRTHTGEKPHSCQFCGKSFIQASQLRAHIFHHTGENAYTCPHCNRAFNRKLRLTTHIKYMHEGAEPMSCSHCDKTFFRKEDLARHFLSHTGERPFECDVCHKSFAVKSSLKIHQLTHRKEPPCSCDTCGRAFIRQDCLMRHMRARHRDVLEDIMASAEKKRLQQQLLNAATEAVAKNQGSLTENMIWNELTLTESIKELLTILVDEACLQDFGFPDAPVDKILDSVIKRCGHKPASEEDFDYIGRMRENAKLLFTVVIDDEAVKSLLNNQTVDEVILHVLRLAKAEST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00753188; iTF_01410165; iTF_01568247; iTF_01568248; iTF_00870757; iTF_01480301; iTF_01481089; iTF_00639727; iTF_00853036;
90% Identity: iTF_00753188; iTF_01410165; iTF_01568248; iTF_01568247;
80% Identity: -