Basic Information

Insect: Zophobas morio
Gene Symbol: su(Hw)
Assembly: GCA_027724725.1
Location: JALNTZ010000006.1:23887367-23890327[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5e-05 0.003 19.1 0.7 1 23 143 166 143 166 0.96

2 13 0.0097 0.58 11.9 2.2 1 19 197 215 197 220 0.91

3 13 1.1e-05 0.00066 21.1 2.3 1 23 226 248 226 248 0.99

4 13 2.8e-05 0.0017 19.9 0.4 2 20 255 273 254 275 0.94

5 13 2.3e-06 0.00014 23.3 1.3 1 23 286 308 286 308 0.98

6 13 5.9e-05 0.0035 18.9 0.9 1 23 318 340 318 340 0.98

7 13 9.5e-06 0.00057 21.3 0.3 1 23 346 368 346 368 0.98

8 13 3.7e-05 0.0023 19.5 2.3 1 23 374 396 374 396 0.98

9 13 2.5e-05 0.0015 20.0 3.5 1 23 402 424 402 424 0.95

10 13 0.00012 0.0074 17.8 3.4 1 23 430 453 430 453 0.97

11 13 7.7e-05 0.0046 18.5 1.0 3 23 461 481 459 481 0.96

12 13 1.5e-06 9.2e-05 23.8 1.5 1 23 487 509 487 509 0.98

13 13 3e-05 0.0018 19.7 3.8 2 23 516 538 515 538 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5e-05	0.003	19.1	0.7	1	23	143	166	143	166	0.96
2	13	0.0097	0.58	11.9	2.2	1	19	197	215	197	220	0.91
3	13	1.1e-05	0.00066	21.1	2.3	1	23	226	248	226	248	0.99
4	13	2.8e-05	0.0017	19.9	0.4	2	20	255	273	254	275	0.94
5	13	2.3e-06	0.00014	23.3	1.3	1	23	286	308	286	308	0.98
6	13	5.9e-05	0.0035	18.9	0.9	1	23	318	340	318	340	0.98
7	13	9.5e-06	0.00057	21.3	0.3	1	23	346	368	346	368	0.98
8	13	3.7e-05	0.0023	19.5	2.3	1	23	374	396	374	396	0.98
9	13	2.5e-05	0.0015	20.0	3.5	1	23	402	424	402	424	0.95
10	13	0.00012	0.0074	17.8	3.4	1	23	430	453	430	453	0.97
11	13	7.7e-05	0.0046	18.5	1.0	3	23	461	481	459	481	0.96
12	13	1.5e-06	9.2e-05	23.8	1.5	1	23	487	509	487	509	0.98
13	13	3e-05	0.0018	19.7	3.8	2	23	516	538	515	538	0.94

Sequence Information

Coding Sequence: ATGGAAGAGGCTTTGAATGTTAAAACGGAGACGCCACCTCAGAAAAATGAAGAAACGGTTGTTCTACAAAACATCCCGTTGGAAAACGAGGAGGAAATACCGATAGTTTTTGGCGATTACGTGGAGAACAATTCGGACGGAAATCTTCACATTAATAGCGAACAAGATGTCATACATACGTATATCATACAGGAAGAAGATTACAATAATATTGAGTATGAAGAAACAACGGTTGTTGAAGAAAGAGATGAGAGTGATGATGAAATGTCTGAAGTGTCCAAGAGAGGCGATCATACTACAGACGGTGCTGCTACGGAAGCTGATGATTCTATGGATTATGAAGAATATTGTGAGGAAGCTGAAGCCGAAGATGACCCTGAGGATCAACCTGATTATATTGATCCTCAAGAATTTGAAGGTGGTGATTATGAGTGTGATTTGTGTCAACGTAAATTCAAAACTACAGCTGGTTTGAAAAGACATATTACTGTAAATCATGCAGAAGAAGAAGATTTGAAGGATCCACTTACTTTCCAATTGTGTTCTTGTTGTGGGGAGCCAGTGGATTCAGCTCATACAATTGGAGATTTTAAATGTGAAACATGCGACAAACTTTTTGTGCAGCAGAATAGCTTAGATCGGCACTGTAGCATAGAACATTGTGAAGGTGATATTTACAAATGTGTGGAATGTAAAAAGGAGTTCAAGATGAAAGAACATCTTATTGAACATATGAAGGTGCACCCGCTATCTAAATGCATCAAATGTCCAGATTGTAGTCGAGAGTTTACAAGGAAATATCATTTAGATAGACATATTGCTCAGACTGGGTGTAATGGGGCTCCTAGAAAGACATTTGTGTGCAAAGTCTGCAATAAAGTTTTTCATCGCAAAGATAACTTGGCTGATCATCTAAGAGCCCATGCTGGACAAGGAAAGAGGAAAAAGGTCTTCATTTGTGAATATTGCCAGAAAGAGTTCCATGGTTCTGCTCTCCTGAATATTCACATAAGGACCCATACGGgcgagaaaccatatccgtgtgatttgtgtccaaagaggttcccttctagtggagctatgaagaaacatcgacggatgcacactggagaaagaccttatgcttgtaaAGAGtgtcataacagatttgcagctaaggaaacccttaatcgtcacatgcgcactcatactggggaaaaaccccacTCTTGTCAGTTCTGCGGGAAATCTTTTATCCAAGCTTCCCAACTGCGTGCTCACATTTTCCATCATACAGGAGAAAATGCTTACACTTGCCCTCACTGTAATCGAGCTTTTAACAGAAAACTAAGACTAACAACTCACATTAAGTACATGCATGAAGGAGCCGAGCCAATGGCTTGCTCCCAATGCGACAAAACGTTCTTTAGAAAAGAGGATTTAGCCAGACATTTTCTGTCCCATACAGGCGAAAGACCTTTTGAATGCGACGTATGCCATAAATCATTTGCCGTGAAATCTTCACTAAAAATCCATCAGTTAACCCATCGCAAAGAGCCTCCTTGCAGTTGCGATACCTGTGGGCGCGCTTTCATTCGACAAGATTGTTTGATGCGTCATATGCGGGCTCGACATAGAGATGTGCTTGAAGATATAATGGCCAGTGCAGAGAAGAAGAGGCTGCAGCAGCAACTACTGAATGCCGCTACTGAAGCGGTGGCTAAAAATCAAGGAAGTTTGACGGAAAATATGGTGTGGAATGAATTGACCCTAACTGAGTCCATTAAAGAGTTGTTAACGATTCTTGTTGATGAAGCTTGCCTCCAAGATTTTGGGTTCCCAGATGCTCCAGTTGATAAGATTTTAGATTCAGTTATTAAGCGCTGTGGGCACAAACCTGCCTCTGAGGAGGATTTTGATTATATTGGAAGAATGAGAGAAAATGCCAAATTGTTGTTTACTGTTGTGATTGATGATGAAGCAGTCAAATCTTTGTTGAATAACCAAACGGTGGATGAAGTGATACTGCACGTTTTAAGGTTAGCAAAGGCTGAAAGTACTTAG
Protein Sequence: MEEALNVKTETPPQKNEETVVLQNIPLENEEEIPIVFGDYVENNSDGNLHINSEQDVIHTYIIQEEDYNNIEYEETTVVEERDESDDEMSEVSKRGDHTTDGAATEADDSMDYEEYCEEAEAEDDPEDQPDYIDPQEFEGGDYECDLCQRKFKTTAGLKRHITVNHAEEEDLKDPLTFQLCSCCGEPVDSAHTIGDFKCETCDKLFVQQNSLDRHCSIEHCEGDIYKCVECKKEFKMKEHLIEHMKVHPLSKCIKCPDCSREFTRKYHLDRHIAQTGCNGAPRKTFVCKVCNKVFHRKDNLADHLRAHAGQGKRKKVFICEYCQKEFHGSALLNIHIRTHTGEKPYPCDLCPKRFPSSGAMKKHRRMHTGERPYACKECHNRFAAKETLNRHMRTHTGEKPHSCQFCGKSFIQASQLRAHIFHHTGENAYTCPHCNRAFNRKLRLTTHIKYMHEGAEPMACSQCDKTFFRKEDLARHFLSHTGERPFECDVCHKSFAVKSSLKIHQLTHRKEPPCSCDTCGRAFIRQDCLMRHMRARHRDVLEDIMASAEKKRLQQQLLNAATEAVAKNQGSLTENMVWNELTLTESIKELLTILVDEACLQDFGFPDAPVDKILDSVIKRCGHKPASEEDFDYIGRMRENAKLLFTVVIDDEAVKSLLNNQTVDEVILHVLRLAKAEST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00415305;
90% Identity: iTF_00415305;
80% Identity: iTF_01568248;