Cpun016393.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyclophora punctaria
Gene Symbol
clz9
Assembly
GCA_951394245.1
Location
OX596187.1:6188943-6191324[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-10 1.7e-07 31.2 0.2 3 44 17 59 17 60 0.95

Sequence Information

Coding Sequence
ATGCCTCGTGCCTACGTAAGAAAAACCGATCGAAGTTCCTATCCGATAGAAAAACTATTAGAAGCCGTCAGGGCCGTTAAAAGTGGTGCCTTGTCAGGTTATGCAGCCTCAAAACATTATGGAATACCAAGAGCGACCATAATCAATCGGGTTTATGAGCGTAAAGGTATGAAGTCAAAAACTTTGGGGAGACCCACGGTTTTATCGCGAGATGTAGAAGAAAACTTGGTAAAAAATCTGCACGCAATGGAGAAATATGGTTTTGGCTTGACAAGAAAGGAATTGATGGAGACTGTGGGACAATATGTGACAATGAATGCTGCGAGCAATCCGTTCAAAAACGGAGTTCCTGGCGAAGACTGGTTCCTTTTGTTTAAGGAACGACATAATATCTCTGTGAAAAAACCGCAGCCGGTAGAGTATGCCCGAAAAACTGCGTGCAGGCCTAATGTAATTTACCCATATTTTGATTTGCTCGAAAAAACAATCAACCAACTAGATCTTTGCGACAAACCATCCCATATTTGGAATGTAGATGAGACGAGTATCAGCAAAGACCCCTCAAAAGCAAAAGTGGTTGGACTGAAAGGATTTACTTCCACAAGAACCATATCATCTCCTGGTAAGGATAATACTACCGTCTTGCTGGGGTGTAATGCTCTTGGCGAAAAAACGCCCCCGTTAATTATTTACAAGGGTAAAAACGTATGGGACGAGTGGACATCACCAGAAGCGTACCCAGGAACAGCATATGCCGCAACAGCTAATGGGTGGATGGAGACCGCTGTTTTTGAGGCATGGTTTGAGAAAGTTTTTCTGCAAACTGTAGGACAAAAGCGGCCCATACTTTTAATATACGACGGACACTCCACCCACGTAGGAATAAATATCATTGAGAAGGCCCGAGCAGCACAAATAACGATTTTGAAGATTCCTCCTCATACCAGCGATGTGTTGCAGCCGTTAGATTTAGCTGTGAATAAACCTTTTAAGGATAGATGGGATGCAGCTTTGGTCAAATGGCAACGATTAAACATTGGAAAGACACTGCCAAAAAAAGAGTTCGCAAAAATCCTTGGCCAAATTTGGACTGCAATAGATCCTCATGTGTGTGCAGCTGGGTTTAAAAAAGCGGGCATTTACCCACTTAACAAAGAGATTGTTCCAGAATCTAAATTTAATCAATTGCTTTTGCGAGAGTGGAAGCAAACCACAATGCCTATGGTTAACAATTTTGTCGTCGATGAAACAAAGTCTTCAGACATATGTACTTTAAGACAAGGTCAGCAGAACAGTCAACCAATTAGACTTTCATGTCCAGATATATTACTTAACATCGCTTTGACAAAGATTAATTCTTGTATATATCAGGCACACAGTCAACCACAGCAAAGGCAGACAAATTGGAATGATTTAGCAGGATGTTCAAAAAATTTCCCTGTAATAGAAAATCAAAAGCCTAAGATACGTATTCTTGAGGACCGGGCAATCACATTTGAAGAGTTATTACTCATGAATATTAAAGCAGGCACAAGTAAtaagataaaaagaaaaagaattgCCCCTGGCGCTGAAGTAATTACGCATGACGATGTTTACCAAAGGTGTAAGCAAATGGAATTAGAAAAAGATGAAAAATTGAAGCAAACACAAGAAAAGAAGTCCAAAGCAATGataaaacaagaaataaaGCAAAAATCCAAATCGATGTGTACTAAAAAAGAGACTAATaagaaattttcaaaaaataaaaaaacaaaagtgcTAACTGAATCATCCAGCGAAAGTGAAATAGAGATGGAAATAAGAGATGAAAGTGACGATGACGAAGACTTTGAACAGTATCGCAAAAACCTTTTAATGCAAGATGATGAAAACGAAGAAGAAGAGATCGATGAATTAAATAGGCATATGGAGGAAGAGAAAATTAATAAGGAAACACGGATGCGAGATATGGTAATGGAGGATGAGAGTAAAGAAGATAAAAACACGCCAAAAATAGAAGACTTTAGTTTAAATGTTGTTCAAAACGATTGGCTTTTGGTTCAATTTTGCACAAAGCGATTTGTAAAACATTACGTTGGAGTAGTACTCCGCATCACAGATGATAGAGTTCCAGTTGTCCAATATGTAAGAAAGACAGTGACTAAAGTAGAAGACCAGACAGTGTTCACTTATCCCGCTTTTGAAGATATATCTGAAGTGAAGCATCAAGAGGATGTAGTTGCAAAATTGCCTAAGCCAGTTATTGGCCGTAGAGGccaaataatttttaaaatgtctttcaaaagttttaatgttcagtaa
Protein Sequence
MPRAYVRKTDRSSYPIEKLLEAVRAVKSGALSGYAASKHYGIPRATIINRVYERKGMKSKTLGRPTVLSRDVEENLVKNLHAMEKYGFGLTRKELMETVGQYVTMNAASNPFKNGVPGEDWFLLFKERHNISVKKPQPVEYARKTACRPNVIYPYFDLLEKTINQLDLCDKPSHIWNVDETSISKDPSKAKVVGLKGFTSTRTISSPGKDNTTVLLGCNALGEKTPPLIIYKGKNVWDEWTSPEAYPGTAYAATANGWMETAVFEAWFEKVFLQTVGQKRPILLIYDGHSTHVGINIIEKARAAQITILKIPPHTSDVLQPLDLAVNKPFKDRWDAALVKWQRLNIGKTLPKKEFAKILGQIWTAIDPHVCAAGFKKAGIYPLNKEIVPESKFNQLLLREWKQTTMPMVNNFVVDETKSSDICTLRQGQQNSQPIRLSCPDILLNIALTKINSCIYQAHSQPQQRQTNWNDLAGCSKNFPVIENQKPKIRILEDRAITFEELLLMNIKAGTSNKIKRKRIAPGAEVITHDDVYQRCKQMELEKDEKLKQTQEKKSKAMIKQEIKQKSKSMCTKKETNKKFSKNKKTKVLTESSSESEIEMEIRDESDDDEDFEQYRKNLLMQDDENEEEEIDELNRHMEEEKINKETRMRDMVMEDESKEDKNTPKIEDFSLNVVQNDWLLVQFCTKRFVKHYVGVVLRITDDRVPVVQYVRKTVTKVEDQTVFTYPAFEDISEVKHQEDVVAKLPKPVIGRRGQIIFKMSFKSFNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00837441; iTF_00837442; iTF_00837443; iTF_00837444; iTF_00837445; iTF_00837446; iTF_00837439; iTF_00837440; iTF_00825594; iTF_00373870; iTF_01531906; iTF_00352991; iTF_00352990; iTF_00352992; iTF_01125402;
90% Identity
iTF_00825594;
80% Identity
-