Istr003204.1
Basic Information
- Insect
- Idaea straminata
- Gene Symbol
- clz9
- Assembly
- GCA_951213275.1
- Location
- OX577847.1:12709932-12712337[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 7e-07 29.5 0.2 3 45 17 60 16 60 0.96
Sequence Information
- Coding Sequence
- ATGCCTCGAGTTTACGTAAGAAAGACTGATCGAAGTTCTTACCCGAAAGAAAAACTATTAGAAGCAGTTAGGGCCGTTAAAAGTGGCGCCTTGTCAGGTTATGAAGCCTCTAAACATTACGCTATACCAAGAGCGACCATAATCAATCGAGTTTATGAGCGTAAAGGTATGAAATCAAATACTTTGGGGAGGGCCACGGTCTTATCGCAAGATCTAGAAGATAACCTTGTTAAAAATTTGCATGCAATGGAAAAATATGGCTTTGGCTTGACAAGAAAGGAATTGATGGAGACTGTGGGACAATATGTGACAGCGAAAGCTGTGAATAATCCGTTCAAAAACGGAGTTCCAGGAGAAGACTGGTTTCTTTTGTTTAAGAAACGTCATAATATCTCTGTAAAAAAACCGCAGCCGGTGGAGTATGCACGAAAAACTGCATGCAGACCTAATGTGATATACCCATATTTTGATTTACTTGAAGAAACAGTAAACCAACTAGCTCTTCGCGACAAACCATCCCATATTTGGAATGTTGATGAGACAAGCTTCAGTAAAGACCCCTCAAAGGCAAAGGTGGTTGGACTGAAAGGATTTACTTCCACAAGAACAATATCATCTCCTGGCAAAGATAACACTACCGTCTTGCTGGGGTGTAATGCTCTTGGCGAAAAAACTCCCCCGTTAATTATTTACAAGGGTAAAAACGTATGGGACGAGTGGACGTCACAAGAAGGATACCCAGGAACAGCGTATGCCGCAACAACTAATGGGTGGATGGAGACCACTGTTTTTGAGGCGTGGTTTGAGAAAGTTTTTTTGACAACAGTAGGACAAAAGCGGcctatacttttaatatacgACGGGCACTCCACCCATGTTGGGATAAATATTATTGAGAAGGCCCGAGCagcaaaaataacaattttgaaGATTCCTCCTCATACCAGCGATGTGTTGCAGCCGTTAGATTTGGCTGTGAACAAACCTTTTAAGGATAGATGGGATGTAGCTTTGGTCAAATGGCAACGATTAAACATTGGTAAAACACTGCCAAAAAAAGAGTTCGCAAAAATTCTTGGCCAAATTTGGACTGCAATAGATCCTAATGTGTGTGCAGCTGGGTTTAAAAAAGCGGGGATCTACCCACTAAACAAAGAGATTGTTCCAGAATCCAAATTTAATCAATTGCTTTTGCGAGAGTGGAAACAAACAACAATGTCACTCGTTAACAATTTTGTCGACgataaaacaaagtcttcagACATATATCCTTTAAGACAAGATCAACAGAACAGTGAGCCAATTAGACGTTTAAATCCAGATTTGTTGCGTAACATCGCTTTGGCAAAGATTAATTCCTGTATACATCTGACACACAGTCAACCACAGCAAAGGCATCAAAATTGGAATGATTTAGCAGGATGTTCAAAAAATTTGCCTGAAACAGAAAATCCAAAGCAAATACATGTTCTTGAGGACCGGGTGATCACGTTTGAAGATTTATTACTCATGACCATAAAAGCAGGCTCAagtaataagataaaaagaaaaagaattgCCACAGGCGCTGAAGTGATTACGCATGACGATGTTTATAAAAGATGTAAGCAAATGGAAATAGAAAAGGCAGAAAAATTGAAgcaaaaacaagaaaagaagtctaaagcaaatataaaacaagaaataaagcAAAAATCTAAAGCACAGTCTGAAACGAGATTTACTAAAAAAGAGAGCAAtacaaaaattccaaaaaaaaaaaaatctaaagtgCTAGCTGAATCATCCAGCGAAAGTGAAATAGAGATGGAAATTAGGGATGAAAGTGAAGATGACGAAGACTATGAACAGTATTGTAAAAACCTTTTTCTGCAAGATAATGAAGAAGaaggagaagaagaagagatcgACGAAATAAATAGGCAGACGgatcaaaagaaaacaaataaaaaaacacgaatGCGAGATATGGAAATGGATATGAACAGTGAGGATGAGAGTAAAGAAGATAAAGAAAATACACAAAAGACGAACAATTTAAATGTTGTTCAAAACGATTGGCTTTTGGTTAAATTTTGCACAAAGCGATCTGTAAAACATTACGTTGGAGTAGTGCTACGCATCACAGATGATGATGTTCCAGTTGTTCAATATGTGAGAAAGACACTGACTAAAGTAGAAGATCAGACAGTGTTCACTTATCCCGCTTTGGAAGATATATCTGAGATAAAGCATCAAGAAGATATTGTTGCTAAATTGCCTAAGCCTGTTATTGGCCGTAGAGgccaaataatttttaaaatgtctttcaAAAGTTTTAATGTTCAGTAA
- Protein Sequence
- MPRVYVRKTDRSSYPKEKLLEAVRAVKSGALSGYEASKHYAIPRATIINRVYERKGMKSNTLGRATVLSQDLEDNLVKNLHAMEKYGFGLTRKELMETVGQYVTAKAVNNPFKNGVPGEDWFLLFKKRHNISVKKPQPVEYARKTACRPNVIYPYFDLLEETVNQLALRDKPSHIWNVDETSFSKDPSKAKVVGLKGFTSTRTISSPGKDNTTVLLGCNALGEKTPPLIIYKGKNVWDEWTSQEGYPGTAYAATTNGWMETTVFEAWFEKVFLTTVGQKRPILLIYDGHSTHVGINIIEKARAAKITILKIPPHTSDVLQPLDLAVNKPFKDRWDVALVKWQRLNIGKTLPKKEFAKILGQIWTAIDPNVCAAGFKKAGIYPLNKEIVPESKFNQLLLREWKQTTMSLVNNFVDDKTKSSDIYPLRQDQQNSEPIRRLNPDLLRNIALAKINSCIHLTHSQPQQRHQNWNDLAGCSKNLPETENPKQIHVLEDRVITFEDLLLMTIKAGSSNKIKRKRIATGAEVITHDDVYKRCKQMEIEKAEKLKQKQEKKSKANIKQEIKQKSKAQSETRFTKKESNTKIPKKKKSKVLAESSSESEIEMEIRDESEDDEDYEQYCKNLFLQDNEEEGEEEEIDEINRQTDQKKTNKKTRMRDMEMDMNSEDESKEDKENTQKTNNLNVVQNDWLLVKFCTKRSVKHYVGVVLRITDDDVPVVQYVRKTLTKVEDQTVFTYPALEDISEIKHQEDIVAKLPKPVIGRRGQIIFKMSFKSFNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00407506;
- 90% Identity
- iTF_00837442; iTF_00837443; iTF_00837444; iTF_00837445; iTF_00837446; iTF_00837439; iTF_00837440;
- 80% Identity
- iTF_00837442; iTF_00837443; iTF_00837444; iTF_00837445; iTF_00837446; iTF_00837439; iTF_00837440;