Cacu013288.2
Basic Information
- Insect
- Cryptophagus acutangulus
- Gene Symbol
- bab1
- Assembly
- GCA_963556235.1
- Location
- OY744562.1:3520216-3523807[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0001 0.12 12.8 0.0 20 35 4 20 1 25 0.87 2 3 2.1e-17 2.6e-14 53.3 0.0 1 43 134 177 134 179 0.95 3 3 3.6 4.4e+03 -1.8 1.3 6 15 264 273 262 277 0.87
Sequence Information
- Coding Sequence
- ATGCGATTCACACAAGCATCCGCACGTTACGGTATACCCAAGGGTACTTTATACGATAATATTCTAGGGAAATCTAAGCGTATGGCCGTATTAGAGGAAGCCGGATTAACTAGTTATGAGGAAAATGCTGTGCTGGAGTTCTGTTGTGACGTCTCAATTTCTCCATATAATCGACGGACAAAGAAGTCGCTCAGTTCCGTGTTGAAATTTGTGGAGAAATTGAGACGAGCCCGAGACCCGGAGTTTATGTTCACCGGACTCTCAGGGTTTCGCTGGTGGTGGGCGTTTTCAGACAGCTACCAATACCAGTTGCAGTCCATGTGGCAAAAATGTTGGAACACAAATCAAAGTCTTGTACATAATTTGCGCTTCCGTGAACGAGGCCCACTGAAATCGTGGAGACCTGAAACGATGGCCGAGGCAATTTTTTCCGTACTGAAAGAAGGTTTGTCCTTATCGCAGGCGGCTCGAAAATATGATATTCCCTATCCGACGTTTGTGCTCTATGCGAATCGAGTGCATAACATGTTGGGCCCTTCAGCTGATGGAGGATctgACCTAAGGCCCAAGGGCAGAGGACGACCGCAAAGAATTCTACTAGGAGTTTGGCCTGATGAGCATATACGAGGTGTTATTAGGGCTGTGGTATTTAGGGATTCGCATCAAATTAAGGACGAGCCACATCTAGCTGCCTATCCTAGATTACATGACGGCGTAACCATCCAAAGTTACCCAAACAATTGCAGCAGTAACGGATCCGATCCAAACGTGTCACCAGGTGCCGCAGCGGCGGCGGCAGTGGCCGCAGTCGCCCAAGGGCTGCGACAGCAAATGTGCAGTATGGTAGCGGCGGCCCACAATCAAAGCACCGTGCACGATACTAATCCGGTGGCCAGCCTAGTGAATTCTCTGGCGTTGGCCGGCCACTGTGGCAGCGTGATGCCGAGTAACGGTGTCCCACCGATGAGTATGAGTCACATAGCTTCCATGCGCAGTATGAGTAGTCCTGCAGGTAGTATACAGGACCTTCGAATATCGCCGTCTGAATCAGCGTTAGATAGTCCGATTTCTTCGCCACTTGGTTTAACGGTGTCGAGTTCCATGGAGCCTGCCATTAATATGAACATAGGGAATAGTATGGATATGGGAATTGGGGTGTCCGGTATGACGTATAAGCCGGCGCGGGCGTTCACGTCGCCGCGGCCAGAGAACCTCTTCCAAGAAGATATCGATGACCTGGTGAAGCCAATGCATACTTCCACAAATCGTCCAAAAGACACCATGGCGGCCATAAAAATGGAGCCGCTGGCAGAGTGTCGTGGGGAATGA
- Protein Sequence
- MRFTQASARYGIPKGTLYDNILGKSKRMAVLEEAGLTSYEENAVLEFCCDVSISPYNRRTKKSLSSVLKFVEKLRRARDPEFMFTGLSGFRWWWAFSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKDEPHLAAYPRLHDGVTIQSYPNNCSSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAHNQSTVHDTNPVASLVNSLALAGHCGSVMPSNGVPPMSMSHIASMRSMSSPAGSIQDLRISPSESALDSPISSPLGLTVSSSMEPAINMNIGNSMDMGIGVSGMTYKPARAFTSPRPENLFQEDIDDLVKPMHTSTNRPKDTMAAIKMEPLAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00078306; iTF_00852596; iTF_00646696; iTF_00814319;
- 90% Identity
- -
- 80% Identity
- -