Amac015437.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- bab1
- Assembly
- GCA_949128115.1
- Location
- OX421963.1:32565820-32587666[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-06 0.0047 17.8 0.0 10 35 2 28 1 33 0.91 2 2 7.7e-17 3.9e-14 53.3 0.0 1 43 142 185 142 187 0.95
Sequence Information
- Coding Sequence
- ATGGAAGCGGTCGTGACGCAAAAAATGCGCTTCACTCAGGCCTCTGCCAGGTACGGCATACCCAAAGGCACGTTGTACGATAACATTCTAGGCAAGTCGAAACGAATGGCCGTACTGGAAGAAGCCGGACTTACCCCCGACGAGGAACTGTCGGTCCTTGAATTCTGCTGTGACGTCTCGGTTTCGCCGTACAACAGGCGAACCAAGAAATCTCTGGTTTCGGTCCTGGCTTACGTGGAGAAACTGAGACGCACCAGAGATCCAGAATTCTTATTCACCGGCCTCTCGGGTTTCAGATGGTGGTGGGCTTTTTCAGACAGCTACCAGTACCAGCTCCAATCCATGTGGCAGAAATGTTGGAATACGAATCAGAGTCTTGTTCACAATCTGCGCTTCCGCGAAAGGGGACCCCTCAAGTCCTGGCGACCGGAGACGATGGCCGAAGCGATATTTTCCGTACTGAAGGAAGGTCTGTCCCTGTCGCAGGCAGCTAGGAAATACGATATCCCTTACCCCACGTTCGTTCTGTACGCCAATCGAGTGCACAACATGCTAGGACCTTCGGCTGATGGTGGTTCAgatttaCGACCGAAAGGCAGAGGAAGACCACAAAGGATTTTGCTGGGCGTTTGGCCCGACGAACACATAAGAGGCGTAATCAGAGCGGTGGTGTTCAGGGATTCACATCAGATTAAAGAAGAACCACATATGGCATACCCACGGATACACGACGGCGTGAGCATACACAGCTACCAAAACAACTCGTGCAGCAACGGCTCCGACCCCAACGTGTCGCCCGGCGCGGCAGCCGCGGCGGCAGTGGCGGCGGTGGCGCAGGGGCTGCGGCAGCAGATGTGCAGCATGGTGGCCGCGGCGCAGCACCAGAGCTCGGGGCACGACACCAACCCCGTCGCCTCCCTCGTCAATTCCCTGGCCTTGGCTGGACATTGTGCAGGCAACGTGTCCACCATGTCCAGCAACGGCGCGCCCATGAGCATGAGCCACGTGTCGTCGATGCGTGGTAGCATGAGCAGCCCCGCCGGCAGCATACAGGACTTGAGGATAAGTCCGGCCGAGTCGGCCCTCGAAAGCCCCATCTCGTCGCCGCTGGGTCTGACGGTGTCCAGCACCATGGAACCGGCCATCAACATGAACATCGGCAACAGCATGGACGTGGGCATCGGCGGCATGACTTACAAGCCGACGCGGTCGTTCACGTCCCCCAGGCCCGAGAACCTCTTCCAAGAAGACATCGACGAACTGGTCAAGCCGATGCACTCTTCCACCCCGCGACCCAAGGACTCCATGGCCACCATCAAGATGGAACCGATGGCCGAGTGTCGCGGCGAATGA
- Protein Sequence
- MEAVVTQKMRFTQASARYGIPKGTLYDNILGKSKRMAVLEEAGLTPDEELSVLEFCCDVSVSPYNRRTKKSLVSVLAYVEKLRRTRDPEFLFTGLSGFRWWWAFSDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEEPHMAYPRIHDGVSIHSYQNNSCSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQSSGHDTNPVASLVNSLALAGHCAGNVSTMSSNGAPMSMSHVSSMRGSMSSPAGSIQDLRISPAESALESPISSPLGLTVSSTMEPAINMNIGNSMDVGIGGMTYKPTRSFTSPRPENLFQEDIDELVKPMHSSTPRPKDSMATIKMEPMAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00395175;
- 90% Identity
- iTF_00646696;
- 80% Identity
- -