Hpha011049.1
Basic Information
- Insect
- Hycleus phaleratus
- Gene Symbol
- bab1
- Assembly
- GCA_013841185.1
- Location
- JACDRP010000027.1:157323-167682[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.9e-11 7.2e-08 31.5 0.0 1 35 34 69 34 74 0.93 2 3 1.2e-17 1.3e-14 53.1 0.0 1 43 198 241 198 243 0.95 3 3 1.8 1.8e+03 -1.8 1.1 6 15 327 336 325 341 0.87
Sequence Information
- Coding Sequence
- ATGGCCAAGTTATTGGAGTCATCTCATGCTTGGCTCGGTGCCTCTACGTCTTCAATAGCCGATTATCCAACATTATTAAAATTAAAAACCCCAACATGGACACAGGACCAATTAAAAGAAGCAATCGATGCTGTTGTTAAACAAAAGATGCGTTTCACACAAGCATCAGCCAAATATGGGATACCAAAAGGCACACTCTATGATAATATATTAGGCAAATCAAAACGTATGGCCGTTTTAGAAGAGGCCGGTTTATCAGCAATTGAAGAAGCTGCGGTATTAGAATTCTGTTGTGATGTTTCTATATCGCCATATAATCGACGTACAAAGAAATCGTTGAGATCAGTTTTGAATTTTGTTGAGAAATTACGACGTACACGTGATCCAGATTTTATATTTACTGGCCTATCTGGATATCGTTGGTGGTGGGCATTTTGTAAGAAACATAATATTGTCTCATTGTATTATGAGAACAATAATGCAGACAGTTATCAGTACCAGTTGCAGTCTATGTGGCAGAAATGTTGGAATACGAATCAAAGTCTGGTACACAATTTGCGCTTCCGTGAACGTGGCCCATTAAAATCATGGCGACCTGAGACGATGGCTGAAGCGATATTTTCAGTTTTGAAAGAGGGCCTATCATTGTCACAGGCAGCTAGGAAATACGATATCCCATATCCTACATTTGTTTTATATGCAAATCGTGTACATAATATGTTAGGACCATCAGCGGACGGCGGTTCAGATTTACGACCGAAAGGCCGTGGTAGGCCGCAACGAATACTGTTGGGTGTATGGCCTGATGAACATATAAGAGGTGTGATAAGGGCGGTAGTGTTTCGAGATTCACATCAAATCAAAGAAGAATCCCATCTTGCCTATCCACGATTGCATGATGGCGTTAGTATACACAGTTATCCGAATAACACTTGTAGTAATGGATCTGATCCGAATGTATCCCCTGGGGCGGCGGCCGCTGCCGCTGTGGCGGCTGTGGCGCAAGGTTTACGTCAACAAATGTGCAGTATGGTGGCAGCGGCACAACATCAAAATTCATCGCACGATACAAATCCTGTAGCGAGTCTAGTGAATTCTTTAGCATTGGCCACACATTGTGGCTCAATGTCAAGTAATGGTGGGCCACCAATGACAATGTCATCATCTTTACGTAGTATGAGTAGTCCGGCTGGTAGTATACAAGATTTACGAATCAGTCCAACTGAATCGGCATTAGAAAGTCCCATATCATCACCATTAGGTTTAACTGTATCGAGTACGATGGAACCTGCGATTAATATGAATATAGGTAATAGTATGGATGTTGGTATTGGTGGTATGACTTATAAACCGACAAGAGCATTCACATCACCCCGGCCGGAGAATCTCTTCCAAGAAGACATCGATGAAATTGTTAAACCGATGCACACTTCCACGACGCGCCCAAAGGACTCTATGGCCACTATTAAAATGGAACCGTTGGCAGAGTGTCGCGGTGAATGA
- Protein Sequence
- MAKLLESSHAWLGASTSSIADYPTLLKLKTPTWTQDQLKEAIDAVVKQKMRFTQASAKYGIPKGTLYDNILGKSKRMAVLEEAGLSAIEEAAVLEFCCDVSISPYNRRTKKSLRSVLNFVEKLRRTRDPDFIFTGLSGYRWWWAFCKKHNIVSLYYENNNADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHQIKEESHLAYPRLHDGVSIHSYPNNTCSNGSDPNVSPGAAAAAAVAAVAQGLRQQMCSMVAAAQHQNSSHDTNPVASLVNSLALATHCGSMSSNGGPPMTMSSSLRSMSSPAGSIQDLRISPTESALESPISSPLGLTVSSTMEPAINMNIGNSMDVGIGGMTYKPTRAFTSPRPENLFQEDIDEIVKPMHTSTTRPKDSMATIKMEPLAECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00395175;
- 90% Identity
- -
- 80% Identity
- -