Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:12341541-12344659[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.7 1e+04 -2.6 3.2 6 43 139 188 135 192 0.52

2 17 0.00086 3.2 8.7 0.0 16 47 189 220 183 226 0.81

3 17 0.61 2.2e+03 -0.5 0.0 22 45 223 246 220 253 0.86

4 17 0.031 1.1e+02 3.7 0.1 23 44 252 273 248 276 0.91

5 17 4.3e-05 0.16 12.8 0.0 21 48 278 305 273 310 0.83

6 17 0.47 1.7e+03 -0.1 0.1 22 44 307 329 304 337 0.80

7 17 0.25 9.3e+02 0.7 0.0 26 46 339 359 332 366 0.86

8 17 0.99 3.6e+03 -1.1 0.0 26 45 367 386 361 394 0.83

9 17 0.34 1.3e+03 0.3 0.0 22 43 391 412 387 416 0.86

10 17 1.5 5.6e+03 -1.7 0.0 18 44 442 468 438 475 0.76

11 17 0.039 1.4e+02 3.3 0.1 26 44 478 496 473 500 0.91

12 17 0.00021 0.78 10.6 0.2 21 47 501 527 496 534 0.83

13 17 2.8 1e+04 -2.6 0.0 24 38 588 602 585 609 0.74

14 17 0.0013 4.7 8.1 0.0 21 43 613 635 607 641 0.88

15 17 5.7 2.1e+04 -3.6 0.1 27 44 647 664 646 669 0.81

16 17 0.0024 9 7.2 0.1 26 46 675 695 670 697 0.90

17 17 0.018 68 4.4 0.0 19 43 697 721 694 725 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.7	1e+04	-2.6	3.2	6	43	139	188	135	192	0.52
2	17	0.00086	3.2	8.7	0.0	16	47	189	220	183	226	0.81
3	17	0.61	2.2e+03	-0.5	0.0	22	45	223	246	220	253	0.86
4	17	0.031	1.1e+02	3.7	0.1	23	44	252	273	248	276	0.91
5	17	4.3e-05	0.16	12.8	0.0	21	48	278	305	273	310	0.83
6	17	0.47	1.7e+03	-0.1	0.1	22	44	307	329	304	337	0.80
7	17	0.25	9.3e+02	0.7	0.0	26	46	339	359	332	366	0.86
8	17	0.99	3.6e+03	-1.1	0.0	26	45	367	386	361	394	0.83
9	17	0.34	1.3e+03	0.3	0.0	22	43	391	412	387	416	0.86
10	17	1.5	5.6e+03	-1.7	0.0	18	44	442	468	438	475	0.76
11	17	0.039	1.4e+02	3.3	0.1	26	44	478	496	473	500	0.91
12	17	0.00021	0.78	10.6	0.2	21	47	501	527	496	534	0.83
13	17	2.8	1e+04	-2.6	0.0	24	38	588	602	585	609	0.74
14	17	0.0013	4.7	8.1	0.0	21	43	613	635	607	641	0.88
15	17	5.7	2.1e+04	-3.6	0.1	27	44	647	664	646	669	0.81
16	17	0.0024	9	7.2	0.1	26	46	675	695	670	697	0.90
17	17	0.018	68	4.4	0.0	19	43	697	721	694	725	0.86

Sequence Information

Coding Sequence: ATGGATGTTGTTAATGACATATCGTTTGAAAAAGTATTTAAAATTGAAAAACATGATCCGGAGGACTCAGAAATTGACAATGTTACGGAGGAACATAATTATCCTGATGATACGAATAATATGAGTGCTCCAGAAAGTGTTTTTATAAATATTGATCTTCCAGTCAGCATAAAAGCAGAGGAGCCTGATAATGAGGAAGCTGCGGATCCACTGGCAGGAGTTACCGAAACACAGGCTGAGGAATCATCGACGGGTTCAAACTTGAAAGGATTATTAGACAGCAATTCGACTAACTATTCTCTAGATAGCAATCAGTATACATTGATTGCTAATGAAAATTTAATTTTAATAAAAGATGAATACGACAGCTCACCTGAGGTAATCAGTGATGTCAAATTAACGAATGTAAAATCATCAAAGAGGCCAAAAGTTACTCAGAAAAAGGAAAGACAGTCTCGTAGTAAAAAGAAACGAAGTTCAAAACCTGCAAAAAAAAAAGCTAAACTTTTGAAATGCGACAGGTGTCCTGCTCTATTTGACTACAATAGTAACCTTGAAAGACATAGGCGAACTCACTCACCGAAAAAACCATACACTTGCGACATTTGTGGAACAAAATTTGCTTGGAAACGTAATTTAAAAGGTCATATATTTTTACATTCTGGAGAGCGACCTTTCAAATGTAAGACATGCTCGAAAACATTCAACAATAAAAATACACTGGAAAGACATATGATTATTCACTTAGGTGTTAGACCACACAAATGCAAAATATGTCCAGCAGGATTTGATTCTAAAAGCAATTTAACGAGACACATTCGCTCTCATACAGGTGAAAAACCATTCCAATGTGAAATCTGTTTAGCAAAGTTTACAGAGAAGCGGAATTTGCAGAATCATTTATTAATTCATTCAGGAGAAAAACCGTGGCAGTGTAATGCATGTCCGTTAAGATTCAGTCAGAAGGCGTACTTGAGAAAACACCAAATGTACCACATAAGTAAAAACGTTCTGGAGTGCGACGTCTGTTCGATGACATTCGAAACAAAACGCAGTCTATCTAGGCATATGACGATTCACGCAACCGACAGGAAGTTTGAATGTGATATGTGTTTAGCAAGATTCATTAAAAAACGTGAACTGACCAATCATATAATGGCTCACACAGGGGACAAACCATGGCACTGTGAGATTTGCCCAGCAAAATTTAGTCAGAAGTTGTATTTAAAAAACCATAAAATTGTTCATGCAGAACAATTACCATTTGAGTGTAAGACTTGCTCTGAAAGATTTGATACGGAAGACAATCTTTCAGAGCACAAAAAATCTCATTCGAAAAATTTATGGCAATGTACAATTTGTAATAAAAAATTTACGTGGAAACATCATCTTGAGAAACACCTACTAACACATACCAGGGCACGACGGTACAGGTGTCCAACGTGTCCAGCAGCGTTTGGTTCTAATAGTAATCTCACTAGACATATTCGCTCTCATACAGGCGAGAAACCATTCCAATGTGAAATTTGCGAAGCAAGATTTAGTGAGAAACGTAATCTCCAAAATCATATTAATACCCATACAGGAGAAAAGCCGTGGCAGTGTGACGATTGTCCAGCGAAATTTGGATCCAGGTCCACATTGACCAAGCACCAGCAGCTGCATAAGCAACCACTTTTATTTTCATGTGACCACTGCTCACAAAAATTTGTTTCAAAACGGAAGCTCATCAAACATATATTAACCCATGCGGACAATTGGCCATTTCAATGTGAAATTTGTTCAGCAAGATTCACCGGGAAAAGGAGTATGTATTTTCACTCTCTGACTCACACAGGTGAAAAACCGTGGGAGTGTGAAATTTGTTTTGCTAAATTTGCTCAAAAAGCTTATTTAACAAGACATAAACTTACTCACATAGATATGCTATCATACAAGTGTCCTCACTGTTCAGAGCGATTTCATTCGGTAGAAAATCTTAATGAACATATACCAATTCACATGGCTCCTAAAATGGTTATACAGTGTGAATTATGTTCAGCAACGTTTCGCGAAGTACGGAATTTAAACAATCATATGGTACTTCATTCTCAAGGAGAAGAACCTTGGAGATGTGAAATTTGTTCAACAGGTTTTAGATGGAAGTTTGATTTAGATAAACATAAACTTGACCATTGTCAGTAA
Protein Sequence: MDVVNDISFEKVFKIEKHDPEDSEIDNVTEEHNYPDDTNNMSAPESVFINIDLPVSIKAEEPDNEEAADPLAGVTETQAEESSTGSNLKGLLDSNSTNYSLDSNQYTLIANENLILIKDEYDSSPEVISDVKLTNVKSSKRPKVTQKKERQSRSKKKRSSKPAKKKAKLLKCDRCPALFDYNSNLERHRRTHSPKKPYTCDICGTKFAWKRNLKGHIFLHSGERPFKCKTCSKTFNNKNTLERHMIIHLGVRPHKCKICPAGFDSKSNLTRHIRSHTGEKPFQCEICLAKFTEKRNLQNHLLIHSGEKPWQCNACPLRFSQKAYLRKHQMYHISKNVLECDVCSMTFETKRSLSRHMTIHATDRKFECDMCLARFIKKRELTNHIMAHTGDKPWHCEICPAKFSQKLYLKNHKIVHAEQLPFECKTCSERFDTEDNLSEHKKSHSKNLWQCTICNKKFTWKHHLEKHLLTHTRARRYRCPTCPAAFGSNSNLTRHIRSHTGEKPFQCEICEARFSEKRNLQNHINTHTGEKPWQCDDCPAKFGSRSTLTKHQQLHKQPLLFSCDHCSQKFVSKRKLIKHILTHADNWPFQCEICSARFTGKRSMYFHSLTHTGEKPWECEICFAKFAQKAYLTRHKLTHIDMLSYKCPHCSERFHSVENLNEHIPIHMAPKMVIQCELCSATFREVRNLNNHMVLHSQGEEPWRCEICSTGFRWKFDLDKHKLDHCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382232;
90% Identity: iTF_00380755; iTF_00380536; iTF_00379066;
80% Identity: iTF_00379066;