Basic Information

Insect: Cotesia congregata
Gene Symbol: -
Assembly: None
Location: contig:12341541-12344659[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 4.6e-05 0.0055 17.8 0.7 2 23 171 192 170 192 0.97

2 20 0.00074 0.088 14.0 0.4 1 23 198 220 198 220 0.96

3 20 6.7e-07 7.9e-05 23.6 2.7 1 23 226 248 226 248 0.98

4 20 2.3e-07 2.7e-05 25.0 1.5 1 23 254 276 254 276 0.98

5 20 6.9e-05 0.0082 17.2 0.5 1 23 282 304 282 304 0.98

6 20 4.7e-05 0.0056 17.7 0.6 2 23 311 332 310 332 0.96

7 20 3.2e-05 0.0038 18.3 0.6 2 23 339 360 338 360 0.96

8 20 0.0008 0.096 13.9 0.3 1 23 366 388 366 388 0.97

9 20 0.00087 0.1 13.8 0.9 2 23 395 416 394 416 0.95

10 20 0.00013 0.015 16.4 1.3 1 23 422 444 422 444 0.98

11 20 0.00014 0.017 16.3 4.9 2 23 450 471 449 471 0.97

12 20 1.5e-07 1.8e-05 25.6 0.2 1 23 477 499 477 499 0.99

13 20 1.5e-06 0.00018 22.4 0.6 1 23 505 527 505 527 0.99

14 20 2.5e-05 0.003 18.6 0.3 2 23 534 555 533 555 0.96

15 20 3.9e-05 0.0047 18.0 3.6 1 23 561 583 561 583 0.98

16 20 0.39 47 5.4 1.2 1 23 589 611 589 611 0.82

17 20 0.00012 0.014 16.5 0.3 2 23 618 639 617 639 0.97

18 20 0.00044 0.052 14.7 1.2 1 20 645 664 645 667 0.94

19 20 0.0018 0.21 12.8 0.2 2 23 675 696 674 696 0.95

20 20 0.19 23 6.4 0.5 2 23 704 725 703 725 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	4.6e-05	0.0055	17.8	0.7	2	23	171	192	170	192	0.97
2	20	0.00074	0.088	14.0	0.4	1	23	198	220	198	220	0.96
3	20	6.7e-07	7.9e-05	23.6	2.7	1	23	226	248	226	248	0.98
4	20	2.3e-07	2.7e-05	25.0	1.5	1	23	254	276	254	276	0.98
5	20	6.9e-05	0.0082	17.2	0.5	1	23	282	304	282	304	0.98
6	20	4.7e-05	0.0056	17.7	0.6	2	23	311	332	310	332	0.96
7	20	3.2e-05	0.0038	18.3	0.6	2	23	339	360	338	360	0.96
8	20	0.0008	0.096	13.9	0.3	1	23	366	388	366	388	0.97
9	20	0.00087	0.1	13.8	0.9	2	23	395	416	394	416	0.95
10	20	0.00013	0.015	16.4	1.3	1	23	422	444	422	444	0.98
11	20	0.00014	0.017	16.3	4.9	2	23	450	471	449	471	0.97
12	20	1.5e-07	1.8e-05	25.6	0.2	1	23	477	499	477	499	0.99
13	20	1.5e-06	0.00018	22.4	0.6	1	23	505	527	505	527	0.99
14	20	2.5e-05	0.003	18.6	0.3	2	23	534	555	533	555	0.96
15	20	3.9e-05	0.0047	18.0	3.6	1	23	561	583	561	583	0.98
16	20	0.39	47	5.4	1.2	1	23	589	611	589	611	0.82
17	20	0.00012	0.014	16.5	0.3	2	23	618	639	617	639	0.97
18	20	0.00044	0.052	14.7	1.2	1	20	645	664	645	667	0.94
19	20	0.0018	0.21	12.8	0.2	2	23	675	696	674	696	0.95
20	20	0.19	23	6.4	0.5	2	23	704	725	703	725	0.93

Sequence Information

Coding Sequence: ATGGATGTTGTTAATGACATATCGTTTGAAAAAGTATTTAAAATTGAAAAACATGATCCGGAGGACTCAGAAATTGACAATGTTACGGAGGAACATAATTATCCTGATGATACGAATAATATGAGTGCTCCAGAAAGTGTTTTTATAAATATTGATCTTCCAGTCAGCATAAAAGCAGAGGAGCCTGATAATGAGGAAGCTGCGGATCCACTGGCAGGAGTTACCGAAACACAGGCTGAGGAATCATCGACGGGTTCAAACTTGAAAGGATTATTAGACAGCAATTCGACTAACTATTCTCTAGATAGCAATCAGTATACATTGATTGCTAATGAAAATTTAATTTTAATAAAAGATGAATACGACAGCTCACCTGAGGTAATCAGTGATGTCAAATTAACGAATGTAAAATCATCAAAGAGGCCAAAAGTTACTCAGAAAAAGGAAAGACAGTCTCGTAGTAAAAAGAAACGAAGTTCAAAACCTGCAAAAAAAAAAGCTAAACTTTTGAAATGCGACAGGTGTCCTGCTCTATTTGACTACAATAGTAACCTTGAAAGACATAGGCGAACTCACTCACCGAAAAAACCATACACTTGCGACATTTGTGGAACAAAATTTGCTTGGAAACGTAATTTAAAAGGTCATATATTTTTACATTCTGGAGAGCGACCTTTCAAATGTAAGACATGCTCGAAAACATTCAACAATAAAAATACACTGGAAAGACATATGATTATTCACTTAGGTGTTAGACCACACAAATGCAAAATATGTCCAGCAGGATTTGATTCTAAAAGCAATTTAACGAGACACATTCGCTCTCATACAGGTGAAAAACCATTCCAATGTGAAATCTGTTTAGCAAAGTTTACAGAGAAGCGGAATTTGCAGAATCATTTATTAATTCATTCAGGAGAAAAACCGTGGCAGTGTAATGCATGTCCGTTAAGATTCAGTCAGAAGGCGTACTTGAGAAAACACCAAATGTACCACATAAGTAAAAACGTTCTGGAGTGCGACGTCTGTTCGATGACATTCGAAACAAAACGCAGTCTATCTAGGCATATGACGATTCACGCAACCGACAGGAAGTTTGAATGTGATATGTGTTTAGCAAGATTCATTAAAAAACGTGAACTGACCAATCATATAATGGCTCACACAGGGGACAAACCATGGCACTGTGAGATTTGCCCAGCAAAATTTAGTCAGAAGTTGTATTTAAAAAACCATAAAATTGTTCATGCAGAACAATTACCATTTGAGTGTAAGACTTGCTCTGAAAGATTTGATACGGAAGACAATCTTTCAGAGCACAAAAAATCTCATTCGAAAAATTTATGGCAATGTACAATTTGTAATAAAAAATTTACGTGGAAACATCATCTTGAGAAACACCTACTAACACATACCAGGGCACGACGGTACAGGTGTCCAACGTGTCCAGCAGCGTTTGGTTCTAATAGTAATCTCACTAGACATATTCGCTCTCATACAGGCGAGAAACCATTCCAATGTGAAATTTGCGAAGCAAGATTTAGTGAGAAACGTAATCTCCAAAATCATATTAATACCCATACAGGAGAAAAGCCGTGGCAGTGTGACGATTGTCCAGCGAAATTTGGATCCAGGTCCACATTGACCAAGCACCAGCAGCTGCATAAGCAACCACTTTTATTTTCATGTGACCACTGCTCACAAAAATTTGTTTCAAAACGGAAGCTCATCAAACATATATTAACCCATGCGGACAATTGGCCATTTCAATGTGAAATTTGTTCAGCAAGATTCACCGGGAAAAGGAGTATGTATTTTCACTCTCTGACTCACACAGGTGAAAAACCGTGGGAGTGTGAAATTTGTTTTGCTAAATTTGCTCAAAAAGCTTATTTAACAAGACATAAACTTACTCACATAGATATGCTATCATACAAGTGTCCTCACTGTTCAGAGCGATTTCATTCGGTAGAAAATCTTAATGAACATATACCAATTCACATGGCTCCTAAAATGGTTATACAGTGTGAATTATGTTCAGCAACGTTTCGCGAAGTACGGAATTTAAACAATCATATGGTACTTCATTCTCAAGGAGAAGAACCTTGGAGATGTGAAATTTGTTCAACAGGTTTTAGATGGAAGTTTGATTTAGATAAACATAAACTTGACCATTGTCAGTAA
Protein Sequence: MDVVNDISFEKVFKIEKHDPEDSEIDNVTEEHNYPDDTNNMSAPESVFINIDLPVSIKAEEPDNEEAADPLAGVTETQAEESSTGSNLKGLLDSNSTNYSLDSNQYTLIANENLILIKDEYDSSPEVISDVKLTNVKSSKRPKVTQKKERQSRSKKKRSSKPAKKKAKLLKCDRCPALFDYNSNLERHRRTHSPKKPYTCDICGTKFAWKRNLKGHIFLHSGERPFKCKTCSKTFNNKNTLERHMIIHLGVRPHKCKICPAGFDSKSNLTRHIRSHTGEKPFQCEICLAKFTEKRNLQNHLLIHSGEKPWQCNACPLRFSQKAYLRKHQMYHISKNVLECDVCSMTFETKRSLSRHMTIHATDRKFECDMCLARFIKKRELTNHIMAHTGDKPWHCEICPAKFSQKLYLKNHKIVHAEQLPFECKTCSERFDTEDNLSEHKKSHSKNLWQCTICNKKFTWKHHLEKHLLTHTRARRYRCPTCPAAFGSNSNLTRHIRSHTGEKPFQCEICEARFSEKRNLQNHINTHTGEKPWQCDDCPAKFGSRSTLTKHQQLHKQPLLFSCDHCSQKFVSKRKLIKHILTHADNWPFQCEICSARFTGKRSMYFHSLTHTGEKPWECEICFAKFAQKAYLTRHKLTHIDMLSYKCPHCSERFHSVENLNEHIPIHMAPKMVIQCELCSATFREVRNLNNHMVLHSQGEEPWRCEICSTGFRWKFDLDKHKLDHCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00382232;
90% Identity: iTF_00379310;
80% Identity: iTF_00379310;