Basic Information

Insect: Diachasma alloeum
Gene Symbol: RREB1
Assembly: GCA_001412515.3
Location: NW:2588748-2602935[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00083 0.062 13.2 0.0 1 23 38 60 38 60 0.98

2 16 8.9e-05 0.0067 16.2 0.2 1 23 74 96 74 96 0.98

3 16 1.4e-07 1.1e-05 25.0 1.3 1 23 102 125 102 125 0.98

4 16 1.3 96 3.2 0.0 1 23 212 236 212 236 0.93

5 16 0.013 0.98 9.4 2.7 2 23 242 264 242 264 0.94

6 16 0.089 6.7 6.8 0.4 1 20 318 337 318 339 0.94

7 16 0.063 4.8 7.3 0.5 1 23 449 471 449 471 0.97

8 16 9.4e-05 0.0071 16.2 0.2 1 23 480 502 480 502 0.98

9 16 0.0014 0.11 12.5 2.8 1 23 508 531 508 531 0.96

10 16 0.00041 0.031 14.2 2.8 1 23 905 928 905 928 0.96

11 16 0.00041 0.031 14.2 0.1 3 23 1190 1210 1188 1210 0.97

12 16 0.36 27 4.9 6.0 1 23 1216 1239 1216 1239 0.97

13 16 0.0026 0.19 11.7 2.2 1 23 1278 1302 1278 1302 0.97

14 16 2.6 2e+02 2.2 2.5 1 23 1390 1413 1390 1413 0.89

15 16 0.0069 0.53 10.3 0.4 2 23 1464 1485 1463 1485 0.94

16 16 0.0024 0.18 11.7 5.5 1 23 1491 1513 1491 1513 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00083	0.062	13.2	0.0	1	23	38	60	38	60	0.98
2	16	8.9e-05	0.0067	16.2	0.2	1	23	74	96	74	96	0.98
3	16	1.4e-07	1.1e-05	25.0	1.3	1	23	102	125	102	125	0.98
4	16	1.3	96	3.2	0.0	1	23	212	236	212	236	0.93
5	16	0.013	0.98	9.4	2.7	2	23	242	264	242	264	0.94
6	16	0.089	6.7	6.8	0.4	1	20	318	337	318	339	0.94
7	16	0.063	4.8	7.3	0.5	1	23	449	471	449	471	0.97
8	16	9.4e-05	0.0071	16.2	0.2	1	23	480	502	480	502	0.98
9	16	0.0014	0.11	12.5	2.8	1	23	508	531	508	531	0.96
10	16	0.00041	0.031	14.2	2.8	1	23	905	928	905	928	0.96
11	16	0.00041	0.031	14.2	0.1	3	23	1190	1210	1188	1210	0.97
12	16	0.36	27	4.9	6.0	1	23	1216	1239	1216	1239	0.97
13	16	0.0026	0.19	11.7	2.2	1	23	1278	1302	1278	1302	0.97
14	16	2.6	2e+02	2.2	2.5	1	23	1390	1413	1390	1413	0.89
15	16	0.0069	0.53	10.3	0.4	2	23	1464	1485	1463	1485	0.94
16	16	0.0024	0.18	11.7	5.5	1	23	1491	1513	1491	1513	0.98

Sequence Information

Coding Sequence: ATGGATTGCTCCGCAAAAGtgACCATCGAGAATAGTCCGGACCAACGACACAGTAGTGAAACACAGACCGATGCCGCATCAACTTCATCGGTTGAACAATTGGAGGGCTCTTACCCCTGTCCTGCCTGCCCCCTCGTGCTAACATCGTCCCGTGACCTGACAAATCACCTTCGGGGTCACAATTCCCCCCGCAGTACCGACTACAGTGGTGAGGAGGACTACTCCTGCGCTATATGCCACAAAGTTCTGAGCTCCGCGAGTTCCCTGGACCGTCACGTACTGGTACACTCTGGTGAGCGTCCATTCAAGTGCAAATACTGCGACATGGCATTCACAACAAATGGAAATATGAATAGACACTTGCGAACGGCGCATCGTGAAGTGTCGCCCCACAGTTACACGGATTCCGAAGGCAGCAGTGACTCGGAGAGGCCGGCAACGAGGCGACACGTAGACGAGTACAACAACAATGAAATAGCTAAACGCAGTTCACCAGACCTAGTGGATCCGGCGTCACCGGCGTCTCGATCAAAGCGAAAGAGGCCGGACTTTCCGGACGACATCGAGATCCAGAGGAGGCACAAGATTCTGCTGAATAATTCGCGAATCGACGGCAAGAATATTCTCCAGAATTTCATGTGTCCAGTGTGTCCCTCCCTGGACTTCCCCACGGGCGCTCTCCTGGAGGCCCACCTAGAGAAGAATCACCCGGACTACACAGCGGAATGTGACACATGCAACAGATCCTTCAAGAACCATCGAGTCCTGAATCTCCACAGATTCATGGTCCACTTCACCGACACCTCAGCACCCCCGCGACACCTTCGAAACTCTGTAATAGGCTTCAACGACTTGACCTTCGTCGACTTCTCAGCAGACAAATTCCCCGCAATAGCCAGAGCAGTCTGCGAGCAATCTCTCCACCGTCCGGCATCCGGAGAGAGTGCAACATTCCAATGCTCAAAATGCCTGCGTGCATTCCCCTGTAAATCGGCCCTCGAGGCCCACGAAATGGACTGCGGAACCCCGCACTATCAAGCCTCCCAAGTGGGTGAAGATCATTCAAAAAGAAACGACTTCTTCGCTGGGCTAGACCTCCAGAACAAAGCAGCAATGACCGAGGCGAAGGAGGGAAAAGACCTTGCTGACATTCAGAGCATAATCTCCGTGACGTCTGGCCCAATATTCCCCCGATCAGATGCCAGCACCCCCGACCAACACATCAAGATGAATCCAAATGTCAATTCCTCGGGGTCTTCGGGGACTACGTCATCCGAGAATAATGAAGAAGAGGCTCAAGACGCATTTTCCGCTGAACTGAGGAAGATGAAGCTCAAGGGTGAATTCCCGTGTAGACTCTGCAGCGCCATATTCCCGAATCTGCGAGCCCTGAAGGGACACCACAAGGAGCACATGGGAGTCGGCCCAGGCATGCCCTACCCCTGCAACGTCTGTCCCTTCACGTCAACGGACAAGGCAGCCCTGAGTCGCCACCTCAAGTCCCACAACGGGGTTCGCCCCTACCAGTGCTCCCTCTGCAAGTACGCCTTCACGACGAAAGCCAACTGCGAGAGGCACGTGAAGAACGGCCACAAGATCATGACCAGAGAGGAGATAAAGAGTGTTCTCATCTACCACGCGAGTGAGGACGCAGCCAACGAGGGCCTCGACAGAACATCCCCAAGAGCCATCAGAGACGACGCCCGCAAATCTCTAGTCTACCCCGACAGGGAAGAGCTTCACTCCCAGCCACACTATCCCCTCAACACCAGACACTCCGATCTCATCGCCGACGAGGTGAGACTGCGCCAGTTGGCATCGATGCGAGCGACCCCAGTCAGTCACTACGAGAAGTCCGACGTGTTCTCAAGGCCCCCACCGATGCACCTGCTAGAGCTGTCCCACAGAATTTCCGAGGACTCGGAGAACCCCCAGGACTTCACAAAGTCAAACTACTCGAGAATGCAGGAGGAGGACTCGAGATCGTCCGACGACAGCGCATCACTAGTCAGCGATGCCAAAACCGACGCACACCAAAGAGCTCAGGCTAGTCCAATTGACCTGAAGAGTACCCCAACGGGTGACGATGCACCACTGGATCTGTCGATGGACGTTCTCGATTTGAGTAAAAAATCCAAGGACAACGGGGCCGATCTGTCGACGACCGATGACTTCGATAAGAGCCAAAAGGACATGTACGAGTCAGCGACGAATCAACTCCTCTTGACGCAGGCCCTCCTCAAGGCCGGTCAATCCGGTAATTCCCCGAGTTCCCTGGAGGCGCTCTACGCAAACGCTCACCTGCTCTACCGAAACTTCGGTGGATTCCCAGGGACCGGAGTTGGGGGAGGAATTCTGCCGCCTTACCTGTTCAACCCCCACCTTTTCGGCCAGGACTTTGCCATGAGAGATAGACTGCAGAAGGAGCTTGTGAGAGGTCTTCAGCTGACGAGTGGAGGAACTCTGGTGGAGCCGCCACTCAACAACGCCAGTTTCCCAGCTGGCTACCCCCAGGGGCGAGACTTGCCCCCCCGATCCCACGAGGAGCAGAGCGACTACTCCAAGATGATGACGTCCAAAGTCGTCAGCAAGGTTGCAAGCCCACGAGAGAAGATGGACACAACGCCCACATCAAATTCCGTGAAGATGGTGATAAAGAATGGAGTGCTGATGCCCAAGCAGAAGCAGAGGAGGTACAGAACTGAGAAGCCCTTCAGCTGTGAGCATTGCTCTGCGAGATTCACCCTGAGGAGCAACATGGAGAGACACATAAAGCAGCAGCATCCCCAGCACTGGAGCCAGAGACCTCGTGGGGGGCATTCGACAAGAGGGCGACCACCGACAAACCCCTCGTCCCTGTTACACGGCATGAATCACTCAAGTCAGCCCCTCCAGCCAGCTTACCCCAACATCCTACCGAAAATGGGGCAGTCTACTGAATACGGTAAACACGCCATCTCGGATCAGGTGAAGTACGCGATTCTCGCGCAGCAGCTGAAGGGCAACAAGCACGAGGATAACGACACTGACGAAGAGTTGATAATCGACGAGGGTGCTGATAAAGGATCGGAGAGCCACGAGGAGGAGAGGCCAATCAGCCTGCTGAGGGGAAAACTGGAGGAGAGTGCAAGGGATTCCAACAGGGAAGTGATCGAGCCCCCCTCGAGCTGCGAAACGCCAATGGACCAAGATCCAGTAGACATGAAGATAAAGTCAGAGCCAGAAGAGCCCAACGACTCTAAACCCAAACCTCCAGACAACGAGGAGACGCCCGATAAACCGAGTATCAAAGCAGAAGACGGAAACGCCGACCTGGCGAGTGTGTCAGAGCTACTGGACAATGCGTCACAGCAATACCAGCAATTCCAGCCGCAGTACATGAGCGACGAAGAAGGCTTGGTCGCCTCAACCAGCGACTGCAACAATTCCGGAAGCGACGAGAAATCCGACTCGGTGAATTCCGCCAACTCTGGCCACTCGTCGTGCTCGAAGCTGAAGAAACTAAagagaaagaagaaaaagaagaagaagaagtcgGCTTACTCAATGGCGCCGAACCGAGTGATCTGCCCGTACTGCGAGCGCCCATTTCCCTGGACATCATCATTGCGAAGACACATTCTCACCCACACCGGTCAGAAGCCCTACCAGTGTGTCCACTGCTCCCTCCTCTTCACCACGAAATCCAACTGCGACCGTCACCTCTTGAGGAAGCACAAGGCGAACCCCAACAAGATGAGAAGAATCAGAAACTCATCGTCCCCAGAGGCCCAAGAGGTCCCCACAAACAACAACGGCACATTCTCCATGCGAAACGTGCCCGAGCGGCCCTACAAATGCAACCAATGCCCGAGTTCCACTTTCTCAACCCTCGGCAATCTCAAGAAGCACAGGTCAACCAAGCACTCCCACGAGGAGAAGTCGAGACCCTCGAGTCCCATGAGCGAGGCGCATTCAGAGAGACAAAACAGTCCGGTGCCAACGAGCAAGCAAAACGACCAGAGTGGCTACGAGAGTCAATCGTCAAGTGTCTCCGAGAATCTGGAGCAGTCAGCTGCACCCGTTGAAGCCGTCAAATCGACCCTCAACACGTCGTCATCAGCCAACGAAACCCCAAGATCGAGGAGACCATCGCCACGTGCCTCCCCAGGGCCGACAGACGCCCCCTTCAAGTGTCACCTCTGCGACAGTGGATTTGCCGAGCGCCAAGACTGCTTGGAGCACATCAAGGAGAACCACAAACGCTCCTACGAGATGCTGCTGGCCAAGGGAGCCCTTGACATGGACACTGAGAACCCCGAGGAGCAACAGCCACCGCCACCCCAGTCGCACCACAGCGACGGAGAGGAGAAACGCGGCAGATTCCCCGATTACAGCAACCGAAAAGTCGTCTGTGCCTTCTGCATGCGTCGTTTCTGGTCAGCCGAGGACCTTCGTCGCCACATGCGCACCCACACCGGCGAGCGTCCCTTCTCCTGCGACATCTGCTCCCGGCGTTTCACCCTGAAGCACAGCATGCTGCGCCACCGCAAGAAGCACGAGTCAGTTGACTCCACGATGTACGTGGGCACGAGTGGGGATGAGGAATCAGCCCCCATCCAGCCACCAACGATAACGCCGAGGACCCAACAAACTCCCCTCATCTCGGTCACCACTGGAGACTCCAGAATAAGGGAAAGGATCTCCCTGCCTACAGTGGCGACAATCGCCACTGGCGACGCAGCCCCCAACAGCCTGATGAGATTCAATCCCTACGAAAAACTGGCCACACTGACAGGTAAACTGGCCAATGCCCAGAACTTTGGCTCCGAATCAACGCCGGACAACGACAATGATCTGATCTCCAATTTACTTGGCATCAGAGATAAAAGTATCATTGACAAGGTTCTCCAGGCCTCTGCTGACGATGCAGCCAAACTTCTTGGGGTTAATAGAAGTCACGAGTGA
Protein Sequence: MDCSAKVTIENSPDQRHSSETQTDAASTSSVEQLEGSYPCPACPLVLTSSRDLTNHLRGHNSPRSTDYSGEEDYSCAICHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHREVSPHSYTDSEGSSDSERPATRRHVDEYNNNEIAKRSSPDLVDPASPASRSKRKRPDFPDDIEIQRRHKILLNNSRIDGKNILQNFMCPVCPSLDFPTGALLEAHLEKNHPDYTAECDTCNRSFKNHRVLNLHRFMVHFTDTSAPPRHLRNSVIGFNDLTFVDFSADKFPAIARAVCEQSLHRPASGESATFQCSKCLRAFPCKSALEAHEMDCGTPHYQASQVGEDHSKRNDFFAGLDLQNKAAMTEAKEGKDLADIQSIISVTSGPIFPRSDASTPDQHIKMNPNVNSSGSSGTTSSENNEEEAQDAFSAELRKMKLKGEFPCRLCSAIFPNLRALKGHHKEHMGVGPGMPYPCNVCPFTSTDKAALSRHLKSHNGVRPYQCSLCKYAFTTKANCERHVKNGHKIMTREEIKSVLIYHASEDAANEGLDRTSPRAIRDDARKSLVYPDREELHSQPHYPLNTRHSDLIADEVRLRQLASMRATPVSHYEKSDVFSRPPPMHLLELSHRISEDSENPQDFTKSNYSRMQEEDSRSSDDSASLVSDAKTDAHQRAQASPIDLKSTPTGDDAPLDLSMDVLDLSKKSKDNGADLSTTDDFDKSQKDMYESATNQLLLTQALLKAGQSGNSPSSLEALYANAHLLYRNFGGFPGTGVGGGILPPYLFNPHLFGQDFAMRDRLQKELVRGLQLTSGGTLVEPPLNNASFPAGYPQGRDLPPRSHEEQSDYSKMMTSKVVSKVASPREKMDTTPTSNSVKMVIKNGVLMPKQKQRRYRTEKPFSCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPTNPSSLLHGMNHSSQPLQPAYPNILPKMGQSTEYGKHAISDQVKYAILAQQLKGNKHEDNDTDEELIIDEGADKGSESHEEERPISLLRGKLEESARDSNREVIEPPSSCETPMDQDPVDMKIKSEPEEPNDSKPKPPDNEETPDKPSIKAEDGNADLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSGHSSCSKLKKLKRKKKKKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCVHCSLLFTTKSNCDRHLLRKHKANPNKMRRIRNSSSPEAQEVPTNNNGTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSHEEKSRPSSPMSEAHSERQNSPVPTSKQNDQSGYESQSSSVSENLEQSAAPVEAVKSTLNTSSSANETPRSRRPSPRASPGPTDAPFKCHLCDSGFAERQDCLEHIKENHKRSYEMLLAKGALDMDTENPEEQQPPPPQSHHSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICSRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEESAPIQPPTITPRTQQTPLISVTTGDSRIRERISLPTVATIATGDAAPNSLMRFNPYEKLATLTGKLANAQNFGSESTPDNDNDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00438985;
90% Identity: iTF_00351373;
80% Identity: -