Basic Information

Insect: Chymomyza fuscimana
Gene Symbol: stc
Assembly: GCA_949987675.1
Location: OX465088.1:64173723-64177144[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 2.6e+04 -4.1 1.6 15 19 397 401 396 401 0.81

2 16 0.048 6.3e+02 1.1 2.2 4 11 430 437 429 438 0.91

3 16 1.1e-06 0.014 15.9 14.4 4 19 444 459 442 459 0.93

4 16 1.1e-05 0.14 12.7 13.7 1 19 495 513 489 513 0.85

5 16 1.8 2.4e+04 -4.0 1.4 7 13 517 523 517 524 0.72

6 16 1.5 1.9e+04 -3.7 0.9 6 10 543 547 542 547 0.83

7 16 1.2e-08 0.00016 22.2 12.8 1 19 553 571 553 571 0.98

8 16 0.26 3.5e+03 -1.3 0.9 5 10 601 606 601 606 0.96

9 16 2.9e-05 0.38 11.3 15.7 4 18 619 633 612 634 0.86

10 16 0.064 8.4e+02 0.7 13.2 1 11 674 684 674 696 0.79

11 16 2.8e-10 3.7e-06 27.4 15.1 1 18 701 718 701 719 0.97

12 16 1.4 1.9e+04 -3.7 1.5 6 10 748 752 747 753 0.61

13 16 2 2.6e+04 -6.2 8.3 10 18 766 775 756 776 0.76

14 16 2.6e-06 0.034 14.7 12.0 1 17 812 828 812 834 0.86

15 16 1.7e-05 0.23 12.1 13.1 4 19 846 863 844 863 0.92

16 16 1.2 1.6e+04 -3.4 0.1 8 12 879 883 878 883 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	2.6e+04	-4.1	1.6	15	19	397	401	396	401	0.81
2	16	0.048	6.3e+02	1.1	2.2	4	11	430	437	429	438	0.91
3	16	1.1e-06	0.014	15.9	14.4	4	19	444	459	442	459	0.93
4	16	1.1e-05	0.14	12.7	13.7	1	19	495	513	489	513	0.85
5	16	1.8	2.4e+04	-4.0	1.4	7	13	517	523	517	524	0.72
6	16	1.5	1.9e+04	-3.7	0.9	6	10	543	547	542	547	0.83
7	16	1.2e-08	0.00016	22.2	12.8	1	19	553	571	553	571	0.98
8	16	0.26	3.5e+03	-1.3	0.9	5	10	601	606	601	606	0.96
9	16	2.9e-05	0.38	11.3	15.7	4	18	619	633	612	634	0.86
10	16	0.064	8.4e+02	0.7	13.2	1	11	674	684	674	696	0.79
11	16	2.8e-10	3.7e-06	27.4	15.1	1	18	701	718	701	719	0.97
12	16	1.4	1.9e+04	-3.7	1.5	6	10	748	752	747	753	0.61
13	16	2	2.6e+04	-6.2	8.3	10	18	766	775	756	776	0.76
14	16	2.6e-06	0.034	14.7	12.0	1	17	812	828	812	834	0.86
15	16	1.7e-05	0.23	12.1	13.1	4	19	846	863	844	863	0.92
16	16	1.2	1.6e+04	-3.4	0.1	8	12	879	883	878	883	0.76

Sequence Information

Coding Sequence: ATGGCAGAGTATTGGCAGCAGCAGTCAAATGGTGCAAGTAGCTCACTTCCACCTGCTGATGAATCATACAATGCAAGCGTGCAGAGCAGTGGCGATCTAATTGTTAATAGTAACAACAACTATGTAAATTTCAATCAATTCATCATGCAACATAATTTGAGATCAAGTAATGTACCATCAGCGACAGTCGGTGATGGTATGGGTCAGAGCGATTACAGTACTGTAGGCGGCGGAGGCGCTTTTGGCTTAGCATCAAGCGTGTCGCAAACTCCAAGGTCTAGCGGATTAAGCAGCATTTATGGCAACTTTTCGTCTCAGCCGTTTATTGAACATGGAAATGGTGATAATCCAGCCACCTCGAACTACTCCGTCAATACATTTACCAACTTATACACACCATTTAATCCCAATCCCTTCGCCGCtagttttgattttaatgcaTCTAAGTTGCATGCAAATGCCCCAGAATTTGTACCGAATTTTGCCAAAATGAGTTTAAACGCGTCTACAGGAGTGAATGGTAACATGCCTACAGAAATGAATGCCAATGGCAATAACACTGCCAGCTTAGACAAAAACAGTGACCAAGTTCAATTGTCTACAGCGTCTACTACAAAAACTACCGCGCCATCCATTATGGGCACTAGCGTCCATACACAGCAGCACCAACGTGGCGCTACTAATAAACTGCAAAGTCGCGTCTCTAATACCTATACGCCCACCGACCGTGAGAGAGAGCCCAAATCAAGCGGCAGCCGCCAAAGACGTGCACAGGCAGAGTATCGTGAGGAGCGTGATGATCGCTATGAACGTAAAAAGCCTCAAAAGCAGCAACGCTATGACAACCACCGCAGCAATAAACGTCGTGATGATTGGAATCGTAATCGCGATCGGATTAATGGCTTTCGCGTTGAAGAACTGGATACAAGCAACGAGAGTCCGCTGCCATCCCCCGAAAAACAAAAGCAGTCTCCCAAGCGCCACCTCACTTCGACGGAGAATGAAAAACTCTCGCAGCGCGAAAAACTCGTACGCGACATCGAACAACGCCGTCTTGAATGTCTCGTCTGTGTGGAACCGATCAAAGCCCATCACGCTGTATGGTCTTGTCTAAATTGTTATCACGTTTTGCATCTGAAATGCACTACCACTTGGGCATCTAGCTCGAAAAGTGAAAACGGCTGGCGCTGCCCCGCTTGCCAAAACGTTTTGGAGGAGGTGCCGCGCGAATATTTGTGCTTCTGCGGCAAGCTAAAAAACCCTCCAGTCACTCGCTCTGAGCTTGCACACTCCTGTGGTGAGGTATGCTGCCGCATCGAGGGTTGTGTCCACGCTTGCACTCTACTATGTCATCCTGGCCCGTGTCCCCCCTGCCAAGCTAATGTGCAGCGGAGCTGCGGCTGCGGAAAATCTTCCAAGACCATGCAATGCGCAATGAAAGAAGAAATTGCATGTGAGGCACAATGTGGTAAGCCTCTTAACTGCGAACAACATGTGTGTCAGGCACTTTGTCATTCCGGAAAGTGCGTTCCTTGTACAGAGAAGCTAGAACAAAATTGCCACTGTGGAAAACAGCAACGTGAAGTCTTATGTACACGCGAAACCCACGACCGGCGTCATTATTCTTGCAGTAAACCTTGCGGTAAGGATCTACTTTGCGGCAATCACAAATGTAAAGATTCATGTCATGCTGGAGTTTGCAGGCCATGTAAGCTAAGTCCTGAGCAGGTAACCTCATGTCCTTGCGGAAAGACGCCAATGCCAAAGGATCAGCGGATATCTTGCCTAGATGCAGTGACTACATGCGAAGACGTTTGTGGAAAAACGCTACGTTGCGGCAAGCCAGCACATCCACATCAATGTGCTAGCAAATGCCACCTTGGCCAGTGCCCACCATGTAACAAACAGACGGCTGTGAAGTGTCGCTGTGGTCATATGGACCAAATGATCAAATGCCGCCAGTTATCCACCCGTGCGGACGATGCACGATGTAAGAAACGCTGCACCAAGAAACGTTCTTGCGGCAAGCATAAGTGCAACCAGGAGTGCTGCATTGATATCGATCACGCCTGTCCGCTGCCTTGCAACCGTACGCTCTCTTGCGGCCGTCATAAATGCGATCAGCCATGTCATCGCGGTAATTGTCCGCCCTGCTATCGTAGTTCCTTCGACGAATTGTACTGTGAGTGTGGTGCGGAAGTCATATATCCTCCCGTGCCATGCGGAACAAAGCGTCCACCATGTAAGCGACCATGCTCACGTGTCCATCCTTGCGAGCACGCTCCTCAACACAATTGCCATGCGGCAGCCACATGCCCACCATGCATGATGTTCACAACAAAATGGTGCCATGGACAGCATGAACAACGCAAGACTATTCCATGCTCACAACCAACCTTTAGTTGTGGTCTTGCATGCGGTCGACCGCTGCCTTGCGGTCGTCACAAGTGTGTTAAGGCTTGCCATGAAGGCGTCTGTCAAACGGGAGGAGAAACCTGTCGTCAGAACTGTACTAATACGCGTACTCATTGCGTACATAAATGTGCAGCTCCATGCCATGATGGTACCTGTCCAGAGACGCCCTGCAAGGAGTTGGTGGAGGTGCAGTGTGAATGTGGACATCGTAAGCAAAACCGCAGCTGCCACGAGCTAGCTCGCGAGTATAGCCGCATTGCGACAGCACAATTGGCATCTTCCATGGCAGAGATGTCTCGAGGAAATTATATGGAGCTAAGCGAGATATTGGCGCCTGTTAAGCTTAACAAAACGAACCGAACTCTCGATTGTAATGACGAGTGCCGTGTAGTAGAGCGTAACCGTCGGCTAGCAATTGGATTGCAAATTCGCAGCCCAGACACACAGCAAAAATTGCTAACGAAGTACTCGGACTTCTTGCGTACATTTGCCAAGCGCAATCCTGTACTTACAAAGTCGGTTTACGAGACCCTTAGCGACCTTGTGAAACTAGCCAAGGAAAGCAAACAGAAATCTCGCAGCCATTCATTTCCAACTATGAATCGGGAGAAGCGACAGCTTGTCCATGAGCTGTGCGAAATGTTTGGTGTAGATTCGGTATCGTATGATAAGGAGCCAAACCGCAATGTGGTTGCCACGGCTCATAAAGATCGGtCGTGGCTTCCTGCCACAAGTATAATGGAAGTCTTGGCGAGAGAATCAGGTCAGCGTCGTGTGCCCGTACCCAGCAACAATGCCTGGAGCCTTAGGAAATTGTAG
Protein Sequence: MAEYWQQQSNGASSSLPPADESYNASVQSSGDLIVNSNNNYVNFNQFIMQHNLRSSNVPSATVGDGMGQSDYSTVGGGGAFGLASSVSQTPRSSGLSSIYGNFSSQPFIEHGNGDNPATSNYSVNTFTNLYTPFNPNPFAASFDFNASKLHANAPEFVPNFAKMSLNASTGVNGNMPTEMNANGNNTASLDKNSDQVQLSTASTTKTTAPSIMGTSVHTQQHQRGATNKLQSRVSNTYTPTDREREPKSSGSRQRRAQAEYREERDDRYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFRVEELDTSNESPLPSPEKQKQSPKRHLTSTENEKLSQREKLVRDIEQRRLECLVCVEPIKAHHAVWSCLNCYHVLHLKCTTTWASSSKSENGWRCPACQNVLEEVPREYLCFCGKLKNPPVTRSELAHSCGEVCCRIEGCVHACTLLCHPGPCPPCQANVQRSCGCGKSSKTMQCAMKEEIACEAQCGKPLNCEQHVCQALCHSGKCVPCTEKLEQNCHCGKQQREVLCTRETHDRRHYSCSKPCGKDLLCGNHKCKDSCHAGVCRPCKLSPEQVTSCPCGKTPMPKDQRISCLDAVTTCEDVCGKTLRCGKPAHPHQCASKCHLGQCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKRPPCKRPCSRVHPCEHAPQHNCHAAATCPPCMMFTTKWCHGQHEQRKTIPCSQPTFSCGLACGRPLPCGRHKCVKACHEGVCQTGGETCRQNCTNTRTHCVHKCAAPCHDGTCPETPCKELVEVQCECGHRKQNRSCHELAREYSRIATAQLASSMAEMSRGNYMELSEILAPVKLNKTNRTLDCNDECRVVERNRRLAIGLQIRSPDTQQKLLTKYSDFLRTFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFGVDSVSYDKEPNRNVVATAHKDRSWLPATSIMEVLARESGQRRVPVPSNNAWSLRKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336401; iTF_00338006; iTF_00339581; iTF_00337189;
90% Identity: iTF_00336401; iTF_00338006;
80% Identity: -