Basic Information

Insect: Chymomyza caudatula
Gene Symbol: stc
Assembly: GCA_035041775.1
Location: JAWNKW010000206.1:1423151-1426567[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1 1.9e+04 -4.1 1.6 15 19 396 400 395 400 0.81

2 17 0.028 5.4e+02 0.8 2.0 4 11 429 436 428 437 0.90

3 17 4.8e-07 0.0091 16.1 14.5 4 19 443 458 441 458 0.91

4 17 9.5e-06 0.18 11.9 14.0 3 19 496 512 488 512 0.87

5 17 0.92 1.8e+04 -4.0 1.4 7 13 516 522 516 523 0.72

6 17 0.74 1.4e+04 -3.7 0.9 6 10 542 546 541 546 0.83

7 17 1e-09 1.9e-05 24.6 12.9 1 19 552 570 552 570 0.98

8 17 0.28 5.4e+03 -2.3 0.6 5 10 600 605 600 605 0.95

9 17 0.00011 2.1 8.5 15.2 4 18 618 632 611 633 0.86

10 17 0.0034 66 3.8 9.3 1 11 673 683 673 684 0.96

11 17 0.025 4.8e+02 1.0 0.6 4 10 688 694 687 694 0.93

12 17 1.4e-10 2.7e-06 27.4 15.1 1 18 700 717 700 718 0.97

13 17 0.73 1.4e+04 -3.7 0.8 6 10 747 751 746 751 0.88

14 17 1 1.9e+04 -7.5 9.7 10 18 765 774 754 775 0.76

15 17 1e-05 0.2 11.8 12.7 1 17 811 827 811 836 0.87

16 17 1.9e-07 0.0036 17.4 14.3 1 19 843 862 843 862 0.96

17 17 0.61 1.2e+04 -3.4 0.1 8 12 878 882 877 882 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1	1.9e+04	-4.1	1.6	15	19	396	400	395	400	0.81
2	17	0.028	5.4e+02	0.8	2.0	4	11	429	436	428	437	0.90
3	17	4.8e-07	0.0091	16.1	14.5	4	19	443	458	441	458	0.91
4	17	9.5e-06	0.18	11.9	14.0	3	19	496	512	488	512	0.87
5	17	0.92	1.8e+04	-4.0	1.4	7	13	516	522	516	523	0.72
6	17	0.74	1.4e+04	-3.7	0.9	6	10	542	546	541	546	0.83
7	17	1e-09	1.9e-05	24.6	12.9	1	19	552	570	552	570	0.98
8	17	0.28	5.4e+03	-2.3	0.6	5	10	600	605	600	605	0.95
9	17	0.00011	2.1	8.5	15.2	4	18	618	632	611	633	0.86
10	17	0.0034	66	3.8	9.3	1	11	673	683	673	684	0.96
11	17	0.025	4.8e+02	1.0	0.6	4	10	688	694	687	694	0.93
12	17	1.4e-10	2.7e-06	27.4	15.1	1	18	700	717	700	718	0.97
13	17	0.73	1.4e+04	-3.7	0.8	6	10	747	751	746	751	0.88
14	17	1	1.9e+04	-7.5	9.7	10	18	765	774	754	775	0.76
15	17	1e-05	0.2	11.8	12.7	1	17	811	827	811	836	0.87
16	17	1.9e-07	0.0036	17.4	14.3	1	19	843	862	843	862	0.96
17	17	0.61	1.2e+04	-3.4	0.1	8	12	878	882	877	882	0.76

Sequence Information

Coding Sequence: ATGGCAGAGTATTGGCAGCAACGGTCAAATGTTGCAAGTAGCACACTTACGCCTTCTGATGAATCATGCAATGGAAGCGTGGAGAGAAGTGACAATCCAACTAttaacagtaacaacaactatgTGAATTTCAACCAATTCATCATGCAACATAACTTGGCAGGCACTGTGCCATCGACGACAATAGATGATCGTTATAACGATTATAGTGCAGTAGGTAGCGGAGGCGCATTTGGTTTAACGTCCAGCGTAGCTCAAAGCCCCATGTCTAGCAGATTCAGCAGCTTGTATGATAACTTTCAGACTCGGCCTTTCATTGCATCTGAAAATGGGGATAACCCATTCACACCGAACTATTCCAATACTACGCTTCCCCACTTAAACACTCCATTTAATCCGAATCCCTTTGCCGCTAGCTTTGATTTTAATGCATCTAAGCTGCATGCTAGTGCGCCTGAATTTGTACcgaattttgccaaaatgagTCTAAATGCGCCTGTGGGAGTGAACGGAAATATGCCCACAGATATGAATTCCAATGGGAACTCTGCCAGCTTAGGCGGACACGGTGCACGAGCCCAATTAAGTTCAATCTCTGCAGCGCCTGCTATAAAAACTGCCGAGGCATCTGAAATGTGCGCATATATTTCAACTCAACAACACCAAAGTGGTGCCaccaacaaactgcaaaatcGCTTCTCTCAAGATTACACAGCCACCGACCGCGGGCGAGAGCCCAAACCAAGCGGTAGCCGCCAACGACGTATACAGGCAGAGTATCGCGAGGAGCGCGATGATCGCTACGAACgaaaaaagccacaaaaacagcagcGCTACGATAACCACCGCAGCAACAAACGGCGTGATGATTGGAATCGTAATCGCGATCGAATTAACGGCTTCCGCGTTGAGGAATTAGATACAAGCAACGAGAGTCCGTTGCCATCCCctgaaaagcaaaagctgTCGCCCAAGCGCCAGCGCTCTTCGACGGAGAATGAAAAACTCTCCCAGCGTGAAAAGCTCGTGCGAGACATTGAACAACGACGCCTTGAATGTCTCGTTTGTGTTGAGCCGATCAAAGCCCATCACGCTGTATGGTCTTGTCACAATTGTTATCACGTTTTACACTTGAAATGCACTACCACTTGGGCATCCAGCTCGAAAGGTGATAACGGCTGGCGTTGCCCGGCTTGCCAAAACGTTTTGGAGGAGGTGCCACgcgaatatttttgtttttgcggcAAGTTAAAAAATCCTCCAGTTACTCGCACCGAGCTTGCCCACTCTTGTGGCGAGCTATGCTGCCGCATTGAGGGTTGTGCCCATGCTTGCACACTACTATGTCATCCAGGCCCGTGTCCTCCGTGTCAAGCGAATGTGCAGCGGACCTGTGGCTGTGGGAAATCTTCTAAGACAATGCAATGCGCTATGAAAGAGAACATTGCATGCGAGGCACAATGTGGCAAGCCTCTTAACTGTGAACTGCATGCCTGCCAGTCGCAGTGCCATTCCGGGAAGTGCGCACCTTGCTCTGAGAAGCTGGAACAAAATTGTCACTGTGGAAAACAGCAACGTGAAGTTTTGTGTACGCGTGAGACCCACGACCGGCGCCATTATTCGTGCAGCAAACCATGCGGCAAGGACTTACCTTGCGGAAATCACAAATGCAAGGATTCGTGTCATGCTGGAGCATGCAGACCATGTAAGCTTAGCCCCGAGCAGGTAACCTCATGCCCTTGCGGTAAGGTGCCACTTTCAAAGGATAAGCGTAGCTCCTGTCTAGATGCTGTACCCACATGCGATAGCGTTTGTGGGAAATCGCTGCGTTGCGGCAAGCCAGCACATCCTCATCAATGCGCCAGCAAATGCCACCTTGGCCAATGTCCACAGTGCAACAAGCAGACAGCTGTCAAGTGTCGCTGCGGTCATATGGACCAAATGATCAAATGCCGTCAGCTGTCTTCACGCGCTGACGATGCCCGATGCAAGAAACGATGTACCAAGAAACGCTCCTGCGGAAAGCATAAATGCAACCAAGAGTGCTGCATTGATATAGACCACACTTGTCCGCTGCCTTGCAACCGGACCCTTTCCTGCGGTCGTCATAAATGTGATCAGCCATGTCACCGCGGTAATTGTCCACCCTGCTATCGTAGCTCCTTTGATGAATTATACTGTGAATGCGGTGCGGAAGTCATATATCCGCCTGTACCTTGCGGGACAAAGCGCCCTCCCTGTAAACGACTCTGCTCGCGTTCCCATCCTTGCGAACATGCTCCTCAGCATAACTGCCATGCGGCCGCCACATGTCCACCATGCATGATGTTTACAACAAGGTGGTGCCACGGCCAGCATGAGCAGCGGAAGACTATTCCGTGCTCACAGCCAACCTTTAGTTGCGGTCTAGCATGTGGTCGACCGTTATCTTGCGGTCGCCACAAGTGCATCAAGGCTTGCCATGAAAGCAACTGTCAAACGGCAGGGGAAACCTGTCGTCAAAGCTGCACAAATGTGCGTGCTCACTGCGGACATAAGTGTGCAGCTCCTTGTCACGATGGGGCCTGTCCAGAGACGCCCTGCAAGGAATTGGTGGAGGTACAGTGTGAATGTGGACACCGTAAGCAAAACCGCAGCTGCCATGAGCTAGCGCGCGAATATAGCCGAATTGCGACAGCCCAATTAGCCTCTTCCATGGCAGAGATGTCTCGAGGAAATTATATGGAGCTAAGCGAGATATTGGCTCCTGTCAAGCTAAACAAGACTAACCGAACACTCGATTGTAATGACGAATGCCGTGTTGTAGAGCGCAACCGTCGGCTAGCAATTGGTTTGCAAACCCGCAATACGGACACACAGCACAAATTACACACAAAGTATTCTGAGTTTTTGCGCACATTTGCCAAGCGCAATCCTGTACTGACCAAGTCTGTTTATGAGACGCTCAGCGACCTTGTAAAACTTGCAAAAGAGAGCAAACAGAAATCCCGTAGCCACTCGTTTCCAACTATGAATCGAGAGAAAAGGCAGCTTGTGCACGAGCTATGCGAAATGTTTGGTGTAGATTCGGTGTCATACGATAAGGAACCGAACAGGAATGTGGTAGCCACTGCTCACAAAGATCGGTCGTGGCTTCCTGCTACAAGCATAATGGAAGTTTTGGCGAGGGAATCAGGTCAGCGGCGTGTACCCGTACCCAGCAACAATGCCTGGAGCCTAAGAAAATCGTAG
Protein Sequence: MAEYWQQRSNVASSTLTPSDESCNGSVERSDNPTINSNNNYVNFNQFIMQHNLAGTVPSTTIDDRYNDYSAVGSGGAFGLTSSVAQSPMSSRFSSLYDNFQTRPFIASENGDNPFTPNYSNTTLPHLNTPFNPNPFAASFDFNASKLHASAPEFVPNFAKMSLNAPVGVNGNMPTDMNSNGNSASLGGHGARAQLSSISAAPAIKTAEASEMCAYISTQQHQSGATNKLQNRFSQDYTATDRGREPKPSGSRQRRIQAEYREERDDRYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFRVEELDTSNESPLPSPEKQKLSPKRQRSSTENEKLSQREKLVRDIEQRRLECLVCVEPIKAHHAVWSCHNCYHVLHLKCTTTWASSSKGDNGWRCPACQNVLEEVPREYFCFCGKLKNPPVTRTELAHSCGELCCRIEGCAHACTLLCHPGPCPPCQANVQRTCGCGKSSKTMQCAMKENIACEAQCGKPLNCELHACQSQCHSGKCAPCSEKLEQNCHCGKQQREVLCTRETHDRRHYSCSKPCGKDLPCGNHKCKDSCHAGACRPCKLSPEQVTSCPCGKVPLSKDKRSSCLDAVPTCDSVCGKSLRCGKPAHPHQCASKCHLGQCPQCNKQTAVKCRCGHMDQMIKCRQLSSRADDARCKKRCTKKRSCGKHKCNQECCIDIDHTCPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKRPPCKRLCSRSHPCEHAPQHNCHAAATCPPCMMFTTRWCHGQHEQRKTIPCSQPTFSCGLACGRPLSCGRHKCIKACHESNCQTAGETCRQSCTNVRAHCGHKCAAPCHDGACPETPCKELVEVQCECGHRKQNRSCHELAREYSRIATAQLASSMAEMSRGNYMELSEILAPVKLNKTNRTLDCNDECRVVERNRRLAIGLQTRNTDTQHKLHTKYSEFLRTFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFGVDSVSYDKEPNRNVVATAHKDRSWLPATSIMEVLARESGQRRVPVPSNNAWSLRKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00338822;
90% Identity: -
80% Identity: -