Basic Information

Insect: Chymomyza procnemis
Gene Symbol: stc
Assembly: GCA_035046065.1
Location: JAWNOJ010000024.1:924195-927598[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 1.8e+04 -4.1 1.6 15 19 387 391 386 391 0.81

2 15 0.024 4.2e+02 1.1 2.2 4 11 420 427 419 428 0.91

3 15 4.7e-07 0.0085 16.1 14.5 4 19 434 449 432 449 0.91

4 15 7.3e-06 0.13 12.3 13.9 2 19 486 503 479 503 0.85

5 15 0.91 1.6e+04 -4.0 1.4 7 13 507 513 507 514 0.72

6 15 0.73 1.3e+04 -3.7 0.9 6 10 533 537 532 537 0.83

7 15 1e-09 1.8e-05 24.6 12.9 1 19 543 561 543 561 0.98

8 15 7.1e-06 0.13 12.3 14.7 4 18 609 623 602 624 0.86

9 15 0.032 5.7e+02 0.7 13.2 1 11 664 674 664 686 0.79

10 15 1.4e-10 2.5e-06 27.4 15.1 1 18 691 708 691 709 0.97

11 15 0.84 1.5e+04 -3.9 0.9 6 10 738 742 738 743 0.81

12 15 1 1.8e+04 -7.8 10.0 10 18 756 765 746 766 0.73

13 15 1.7e-08 0.0003 20.8 10.4 1 18 802 823 802 824 0.85

14 15 2.7e-06 0.048 13.7 13.0 2 19 835 853 834 853 0.91

15 15 0.51 9.1e+03 -3.2 2.0 7 12 868 873 862 873 0.67

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	1.8e+04	-4.1	1.6	15	19	387	391	386	391	0.81
2	15	0.024	4.2e+02	1.1	2.2	4	11	420	427	419	428	0.91
3	15	4.7e-07	0.0085	16.1	14.5	4	19	434	449	432	449	0.91
4	15	7.3e-06	0.13	12.3	13.9	2	19	486	503	479	503	0.85
5	15	0.91	1.6e+04	-4.0	1.4	7	13	507	513	507	514	0.72
6	15	0.73	1.3e+04	-3.7	0.9	6	10	533	537	532	537	0.83
7	15	1e-09	1.8e-05	24.6	12.9	1	19	543	561	543	561	0.98
8	15	7.1e-06	0.13	12.3	14.7	4	18	609	623	602	624	0.86
9	15	0.032	5.7e+02	0.7	13.2	1	11	664	674	664	686	0.79
10	15	1.4e-10	2.5e-06	27.4	15.1	1	18	691	708	691	709	0.97
11	15	0.84	1.5e+04	-3.9	0.9	6	10	738	742	738	743	0.81
12	15	1	1.8e+04	-7.8	10.0	10	18	756	765	746	766	0.73
13	15	1.7e-08	0.0003	20.8	10.4	1	18	802	823	802	824	0.85
14	15	2.7e-06	0.048	13.7	13.0	2	19	835	853	834	853	0.91
15	15	0.51	9.1e+03	-3.2	2.0	7	12	868	873	862	873	0.67

Sequence Information

Coding Sequence: ATGGATGAGTattggcagcaacaaacaaatggtGCGAGTAGCTCACTTGCAACCGCTGATGAATCATACAATGCAGGCAGCGTGCGGAGCACTGGcgatttaatgtttaatagcaacaacaactatgtaaatttcaatcaatttatcATGCAACATAATTTGGGAACAAATAATCTATCAACGGCAGCAGTTGGTGACGGTCTGCCTGCGAACGATGGCAGTGGAAGTGCTTTTGGCTTGGCATCGAGAGTTGTGCATGCGCCAAGATCAAGCaTGTATGCCGACTTCTCGTCTCAATCGTATGGCCATTGCGATAATCCAGTCAGCTCCAACTATTTAAACACTATGTTCACCAATTCATACATGCCGTTTAGTCCTAATCCTTTTGCTGCCAGTTTTGATTTTAGTACATCcaagttgcatgcaaatgCACCAGAGTTTGTGCcgaattttgccaaaatgagTTTGAACACCACTGCAGCTCTAAATGGTAACGTAGCTACAGAAATGTGTACCAATGGAAATAACACTGCTGCTGGCTTAGACGAAAACAGTTCGCAATTGCCTGcagaaattattgcaaaaaatgaagcTCCATCTACTTTGCACGCCACTAATATCCATGCGCATCAGCACCAACGTGGTGCTActaataaaatgccaaatcgCGCCACGAATAGCTACACATCCAACGATCGTGAGCGGGAGCCTAAACCAAGCGGCAGCCGCCAAAGACGTGCGCAGGTTGAGTACCGTGAGGAGCGTGATGATCGCTATGAGCGTAAAAAGCCACAGAAGCAGCAACGATACGATAATCACCGCAGTAACAAACGTCGCGATGATTGGAATCGCAATCGGGACCGCATCAATGGCTTTCGTGTTGAGGAACTGGATACAAGTAACGAGAGTCCGCTACCATCACcggaaaagcaaaagcaatcgCCTAAGCGCCAACTCGCTTCGACGGAGAATGAAAAACTTTCGCAGCGCGAAAAACTTGTGCGCGACATCGAACAACGACGTCTGGAATGCCTCGTTTGTGTGGAGCCCATTAAAGCGCATCACGCTGTTTGGTCTTGTCAAAATTGTTATCacgttttgcatttaaagtgcACTACAACCTGGGCATCTAGCTCAAAAAGTGATAACGGCTGGCGCTGTCCTGCTTGTCAAAACGTTTTGGAGGAGGTGCCACGTGAATATTTATGCTTCTGCGGCAAGCTAAAAAACCCTCCAGTCACTCGTTCAGAGCTTGCACACTCCTGCGGTGAGGTCTGCTGTCGCATTGAGGGTTGTGCCCATGCTTGTACGCTGCTATGTCATCCAGGCCCGTGTCCCCCCTGTCAAGCTAATGTGCAGCGTAGTTGTGGATGTGGCAAATCTTCCAAGACCATGCAATGCGCAATGAAAGAAGAAATCGCATGTGAGGCACAATGTGGCAAGTTGCTTAACTGCGAACATCATGTTTGTAAGGCACTTTGTCATTCCGGAAAGTGCGCTCCTTGCACAGAAAAGCTTGAACAAAATTGCCACTGTGGAAAACAGCAACGTGAAGTTTTGTGTACACGTGAAACCAACGAGCGCCGTCATTACTCTTGCAGTAAGCCTTGTGGTAAGGATCTGCTTTGCGGCAATCACAAATGTAAAGATTCATGTCATGCTGGAGCTTGCAGGCCATGTAAGCTAAGTCCTGAGCAGGTAACTTCATGTCCTTGCGGAAAGATGCCTCTACCAAAGGATCAGCGTACATCTTGTTTAGATGCAGTGCCTATATGCGATGGTATTTGTGCCAAAACGCTACGTTGCGGCAAGTCGGCGCATCCCCATCAATGCGCTAGTAAATGTCATCTTGGACAATGCCCACCGTGTAACAAACAGACGGCTGTAAAGTGTCGCTGCGGTCATATGGACCAAATGATCAAATGCCGCCAGTTATCAACTCGTGCGGACGATGCACGTTGCAAGAAACGCTGCACTAAGAAACGTTCTTGCGGCAAGCATAAGTGCAACCAGGAGTGCTGTATTGATATCGATCACGCCTGTCCACTGCCTTGCAACCGTACCCTCTCGTGCGGTCGTCACAAATGCGATCAGCCATGTCATCGCGGCAATTGTCCGCCCTGTTATCGTAGTTCCTTCGATGAATTGTACTGTGAGTGTGGTACAGAAGTTATATATCCGCCAGTACCATGCGGAACGAAACGTCCTATATGTAAACGACCTTGCTCACGTGTGCATCCTTGCGAGCATGCTCCTCAACACAACTGCCATGCGGCACCCACATGCCCACCTTGCATGATGTTCACAACAAAGTGGTGCCATGGACAACATGAACAACGCAAGACTATTCCATGCTCACAGTCGACTTTTAGTTGTGGTCTAGCATGCGGTCGACCACTACCTTGCGGTCGCCACAAGTGTATTAAGGCTTGTCATGAAGGTGCCTGCCAAAATGCCGGAGAAACCTGTCGTCAAATGTGCACAAATACGCGTGTTCAATGTGCACATAAATGTGCAGCTCCATGCCACGATGGTTCCTGCCCAGAGACGCCCTGCAAGGAGTTGGTAGAGGTGCAGTGTGAGTGTGGGCATCGTAAACAAAACCGCACCTGCCACGAACTAGCGCGCGAATATAGCCGTATTGCGACAGCACAGTTGGCATCTTCTATGGCAGAAATGTCTCGGGGAAATTATATGGAACTTAGCGAGATATTGGCGCCCATTAAGCTTAATAAGACGAACCGAACACTCGATTGTAATGAAGAGTGCCGTGTTGTGGAGCGTAACCGTCGACTAGCAATTGGATTGCAAATTCGTAACCAAGATACGCAGCAAAAACTGCTGACTAAGTATTCGGACTTTTTGCGTTCGTTTGCAAAGCGTAATCCTGTACTTACGAAGTCCGTTTATGAGACGCTGAGCGACCTTGTCAAACTAGCCAaggaaagcaaacaaaaatcgcGTAGCCACTCGTTTCCAACTATGAATCGTGAGAAGCGACAGCTGGTGCATGAGCTCTGCGAGATGTTTGGCGTCGATTCGGTATCGTATGATAAGGAGCCCAATCGTAATGTAGTTGCCACTGCTCATAAAGATCGGtcgTGGTTGCCAGCCACAAGTATAATGGAAGTTTTGGCAAGAGAATCAGGGCAGCGCCGTGTGCCCGTACCGAGCAACAACGCCTGGAGCCTTAGAAAAATGTAG
Protein Sequence: MDEYWQQQTNGASSSLATADESYNAGSVRSTGDLMFNSNNNYVNFNQFIMQHNLGTNNLSTAAVGDGLPANDGSGSAFGLASRVVHAPRSSMYADFSSQSYGHCDNPVSSNYLNTMFTNSYMPFSPNPFAASFDFSTSKLHANAPEFVPNFAKMSLNTTAALNGNVATEMCTNGNNTAAGLDENSSQLPAEIIAKNEAPSTLHATNIHAHQHQRGATNKMPNRATNSYTSNDREREPKPSGSRQRRAQVEYREERDDRYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFRVEELDTSNESPLPSPEKQKQSPKRQLASTENEKLSQREKLVRDIEQRRLECLVCVEPIKAHHAVWSCQNCYHVLHLKCTTTWASSSKSDNGWRCPACQNVLEEVPREYLCFCGKLKNPPVTRSELAHSCGEVCCRIEGCAHACTLLCHPGPCPPCQANVQRSCGCGKSSKTMQCAMKEEIACEAQCGKLLNCEHHVCKALCHSGKCAPCTEKLEQNCHCGKQQREVLCTRETNERRHYSCSKPCGKDLLCGNHKCKDSCHAGACRPCKLSPEQVTSCPCGKMPLPKDQRTSCLDAVPICDGICAKTLRCGKSAHPHQCASKCHLGQCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFDELYCECGTEVIYPPVPCGTKRPICKRPCSRVHPCEHAPQHNCHAAPTCPPCMMFTTKWCHGQHEQRKTIPCSQSTFSCGLACGRPLPCGRHKCIKACHEGACQNAGETCRQMCTNTRVQCAHKCAAPCHDGSCPETPCKELVEVQCECGHRKQNRTCHELAREYSRIATAQLASSMAEMSRGNYMELSEILAPIKLNKTNRTLDCNEECRVVERNRRLAIGLQIRNQDTQQKLLTKYSDFLRSFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFGVDSVSYDKEPNRNVVATAHKDRSWLPATSIMEVLARESGQRRVPVPSNNAWSLRKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00338822;
90% Identity: -
80% Identity: -