Basic Information

Insect: Chymomyza amoena
Gene Symbol: stc
Assembly: GCA_037043745.1
Location: JBAMAX010000363.1:54086-57504[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1 2.5e+04 -4.1 1.6 15 19 397 401 396 401 0.81

2 16 0.024 5.9e+02 1.1 2.2 4 11 430 437 429 438 0.91

3 16 3e-07 0.0073 16.8 15.1 1 19 442 459 442 459 0.93

4 16 2.4e-05 0.59 10.7 15.5 2 19 496 513 489 513 0.85

5 16 0.92 2.3e+04 -4.0 1.4 7 13 517 523 517 524 0.72

6 16 0.34 8.2e+03 -2.6 1.3 5 10 542 547 542 547 0.93

7 16 6e-09 0.00015 22.2 12.8 1 19 553 571 553 571 0.98

8 16 0.57 1.4e+04 -3.3 0.5 5 10 601 606 601 606 0.90

9 16 1.5e-05 0.36 11.3 15.7 4 18 619 633 612 634 0.86

10 16 0.032 7.9e+02 0.7 13.2 1 11 674 684 674 696 0.79

11 16 1.4e-10 3.5e-06 27.4 15.1 1 18 701 718 701 719 0.97

12 16 0.72 1.8e+04 -3.7 1.5 6 10 748 752 747 753 0.61

13 16 1 2.5e+04 -8.9 12.1 4 18 760 775 756 776 0.76

14 16 1.3e-06 0.031 14.7 12.0 1 17 812 828 812 834 0.86

15 16 5.2e-05 1.3 9.6 14.6 2 19 845 863 844 863 0.91

16 16 0.61 1.5e+04 -3.4 0.1 8 12 879 883 878 883 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1	2.5e+04	-4.1	1.6	15	19	397	401	396	401	0.81
2	16	0.024	5.9e+02	1.1	2.2	4	11	430	437	429	438	0.91
3	16	3e-07	0.0073	16.8	15.1	1	19	442	459	442	459	0.93
4	16	2.4e-05	0.59	10.7	15.5	2	19	496	513	489	513	0.85
5	16	0.92	2.3e+04	-4.0	1.4	7	13	517	523	517	524	0.72
6	16	0.34	8.2e+03	-2.6	1.3	5	10	542	547	542	547	0.93
7	16	6e-09	0.00015	22.2	12.8	1	19	553	571	553	571	0.98
8	16	0.57	1.4e+04	-3.3	0.5	5	10	601	606	601	606	0.90
9	16	1.5e-05	0.36	11.3	15.7	4	18	619	633	612	634	0.86
10	16	0.032	7.9e+02	0.7	13.2	1	11	674	684	674	696	0.79
11	16	1.4e-10	3.5e-06	27.4	15.1	1	18	701	718	701	719	0.97
12	16	0.72	1.8e+04	-3.7	1.5	6	10	748	752	747	753	0.61
13	16	1	2.5e+04	-8.9	12.1	4	18	760	775	756	776	0.76
14	16	1.3e-06	0.031	14.7	12.0	1	17	812	828	812	834	0.86
15	16	5.2e-05	1.3	9.6	14.6	2	19	845	863	844	863	0.91
16	16	0.61	1.5e+04	-3.4	0.1	8	12	879	883	878	883	0.76

Sequence Information

Coding Sequence: ATGGCAGAGTATTGGCAGCAGCAGTCAAATGGTGCAAGTAGTTCGCTTCCACTTGCTGATGAACCGTATAATGGAAGCGTGCAAAGCAGTGACGATCTAATTGTTAATAGTAACAACAACTATGTAAATTTCAATCAATTCATCATGCAGCATAATTTGAGATCAAATAATCTACCATCAGCGACGGTCGGTGATGGTATGGGTCAGAGCGATTGCAGTACTGTAGGCGGCGGAGGCGCTTTTAACTTGACATCAAACATGTCGCAAATTCCAAGGTCTAGCGGGTTAAGCAGCaTTTATGGTACTTTTTCGCCTCAGCCGTTCATTGAATATGGAAATGGAGATAATCCAGCCACTTCGAACTACTCGGGCACAACGTTTACCAACTTATACACACCTTTTAATCCCAATCCCTTTGCCGCCAGCTTTGATTTTAATGCATCTAAGTTGCAAGCAAATGCCCCAGAATTTGTACCGAATTTTGCCAAAATGAGTTTAAATGCGTCAACTAGAGTAAATGGTAACATGCCTACAGAAACGAATGCCAATGGCAATAATACTGCCACCTTAGACGAAAGCAATGACCAAGTTCAATTGTCTGCAACTTCAACTACAAAAACTGCCGAGCCATCCATTATGGGCCCTAATGTCCATACACAGCAGCACCATCGTGGTGCTACGAATAAACCGCAAAGTCGCGTCTCTAATACCTATACACCCACCGTTCGTGAGAGAGACCCCAAATCAAGCGGCAGCCGCCAAAGACGTGCACAGGCAGAGTATCGTGAGGAGCGGGATGATCGCTATGAACGCAAAAAGCCTCAGAAGCAGCAGCGCTATGACAACCACCGCAGCAATAAACGACGTGATGATTGGAATCGTAACCGCGATCGGATTAATGGCTTTCGCGTTGAAGAGCTGGATACAAGCAATGAGAGTCCGCTGCCATCCCCTGAAAAACACAAGCAGTCGCCCAAGCGCCACCTCACTTCGACGGAGAATGAAAAACTCTCTCAGCGCGAAAAACTCGTACGCGACATCGAACAACGTCGAATTGAATGTCTCGTTTGTGTGGAGCCGATCAAAGCCCATCACGCTGTTTGGTCTTGTCAAAACTGTTATCACGTTTTGCATCTGAAATGCACTACCACTTGGGCATCTAGCTCAAAAAGTGAAATAGGCTGGCGCTGCCCCGCTTGCCAAAACGTTTTGAAGGAGGTGCCGCGCGATTATTTATGCTTCTGCGGCAAGTTAAAAAACCCTCCAGTTACTCGCTCTGAGCTTGCACACTCCTGCGGTGAGGTATGCTGCCGTATCGAGGGTTGTTCCCACGCTTGCACTCTACTATGTCATCCAGGCCCGTGTCCCCCCTGCCAAGCTAATGTGCAGCGAAGCTGCGGCTGCGGAAAATCTTCCAAGACCATGCAATGCGCAATGAAAGAAGAAATTGTATGCGAGGCACAATGTGGCAAGCCTCTTAATTGTGAACATCATGTATGTCAGGCACTTTGTCATTCCGGAAAGTGCGTTCCTTGCTCAGAAAAACTAGAACAAAATTGTCACTGTGGAAAGCAGCAACGTGAAGTCTTATGTACTCGCGAAACTCACGACCGGCGTCATTATACTTGCAGTAAACCGTGCGGTAAAGATCTACTTTGCGGCAATCACAAATGTAAAGATTCATGTCATGCTGGAGTTTGCAGGCCATGTAAGCTAAGTCCTGAACAGGTAACCTCATGTCCTTGCGGAAAGGCGCCACTGCCAAAGGATCAGCGGACATCTTGCCTAGATGCAGTGCCTACGTGCGAAGGCGTTTGTGGAAAAACGCTACGTTGCGGCAAGCCAGCACATCCACATCAATGTGCCAGCAAATGCCACCTTGGCCAGTGCCCACCATGTAACAAACAGACGGCTGTGAAGTGTCGCTGTGGTCATATGGACCAAATGATCAAATGCCGCCAGTTATCCACACGTGCGGACGATGCACGATGCAAGAAACGCTGCACTAAAAAACGTTCTTGCGGCAAGCATAAGTGCAACCAGGAGTGCTGCATCGATATCGATCACGCCTGTCCGCTGCCTTGCAACCGTACCCTCTCTTGCGGTCGTCATAAATGCGATCAGCCGTGTCATCGCGGTAATTGTCCGCCCTGCTATCGTAGTTCCTTCGATGAGTTGTACTGTGAGTGTGGTGCGGAAGTCATATATCCGCCCGTACCATGCGGAACAAAGCGTCCTCCATGTAAGCGACCTTGCTCACGTGTTCATCCTTGCGAGCACACTCCTCAACACAATTGCCATGCCGCAGCCACATGCCCACCATGTATGATGTTTACAACAAAATGGTGTCATGGACAGCATGAACAACGCAAGACTATTCCATGCTCACAACCAACCTTTAGTTGTGGTCTAGCATGCGGTCGACCACTACCTTGCGGTCGTCACAAGTGTGTTAAGGCTTGCCATGAAGGTGTCTGTCAAACTGGAGGAGAAACCTGTCGTCAAAACTGCACTAATACGCGCGCTCAATGTGCACATAAATGTGGAGCTCCATGCCATGATGGCACCTGTCCAGAGACGCCTTGCAAGGAGTTGGTGGAGGTGCAGTGTGAATGTGGACATCGCAAGCAAAATCGCAGCTGTCACGAGCTAGCTCGCGAATATAGCCGCATTGCGACAGCACAATTGGCATCTTCCATGGCAGAGATGTCTCGAGGAAATTATATGGAGCTAAGCGAAATATTGGCGCCTGTTAAGCTTAACAAAACAAACAGAACTCTCGATTGTAATGACGAGTGCCGTGTAGTAGAACGTAACCGTCGGTTGGCAATTGGTTTGCAAATTCGCAATCCAGACACACAGCAAAAATTACTAACGAAGTACTCTGACTTTTTGCGTACATTTGCCAAGCGCAATCCTGTACTTACAAAGTCGGTTTACGAGACTCTTAGTGACCTTGTGAAACTAGCCAAGGAAAGCAAACAGAAATCACGCAGCCATTCGTTTCCAACTATGAATCGGGAGAAGCGGCAGCTTGTCCACGAGCTGTGTGAAATGTTTGGTGTAGATTCGGTATCGTATGATAAGGAGCCAAATCGCAATGTGGTTGCCACCGCTCATAAAGATCGGTCGTGGCTTCCTGCCACAAGTTTAATGGAAGTCTTGGCGAGAGAGTCAGGTCAGCGTCGTGTGCCCGTACCCAGCAACAATGCATGGAGCCTTAGGAAATTGTAG
Protein Sequence: MAEYWQQQSNGASSSLPLADEPYNGSVQSSDDLIVNSNNNYVNFNQFIMQHNLRSNNLPSATVGDGMGQSDCSTVGGGGAFNLTSNMSQIPRSSGLSSIYGTFSPQPFIEYGNGDNPATSNYSGTTFTNLYTPFNPNPFAASFDFNASKLQANAPEFVPNFAKMSLNASTRVNGNMPTETNANGNNTATLDESNDQVQLSATSTTKTAEPSIMGPNVHTQQHHRGATNKPQSRVSNTYTPTVRERDPKSSGSRQRRAQAEYREERDDRYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFRVEELDTSNESPLPSPEKHKQSPKRHLTSTENEKLSQREKLVRDIEQRRIECLVCVEPIKAHHAVWSCQNCYHVLHLKCTTTWASSSKSEIGWRCPACQNVLKEVPRDYLCFCGKLKNPPVTRSELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVQRSCGCGKSSKTMQCAMKEEIVCEAQCGKPLNCEHHVCQALCHSGKCVPCSEKLEQNCHCGKQQREVLCTRETHDRRHYTCSKPCGKDLLCGNHKCKDSCHAGVCRPCKLSPEQVTSCPCGKAPLPKDQRTSCLDAVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCTKKRSCGKHKCNQECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFDELYCECGAEVIYPPVPCGTKRPPCKRPCSRVHPCEHTPQHNCHAAATCPPCMMFTTKWCHGQHEQRKTIPCSQPTFSCGLACGRPLPCGRHKCVKACHEGVCQTGGETCRQNCTNTRAQCAHKCGAPCHDGTCPETPCKELVEVQCECGHRKQNRSCHELAREYSRIATAQLASSMAEMSRGNYMELSEILAPVKLNKTNRTLDCNDECRVVERNRRLAIGLQIRNPDTQQKLLTKYSDFLRTFAKRNPVLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEMFGVDSVSYDKEPNRNVVATAHKDRSWLPATSLMEVLARESGQRRVPVPSNNAWSLRKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00338822;
90% Identity: iTF_00338822;
80% Identity: -