Cfes021321.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- -
- Assembly
- GCA_963931855.1
- Location
- OZ007555.1:11085561-11089340[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0003 0.078 15.2 0.3 2 23 35 56 34 56 0.97 2 17 0.36 93 5.5 4.9 1 23 62 85 62 85 0.89 3 17 0.00039 0.1 14.9 0.4 3 23 90 111 88 111 0.94 4 17 0.0035 0.92 11.8 0.1 2 21 120 139 119 140 0.92 5 17 0.00017 0.044 16.0 1.7 1 23 148 170 148 170 0.97 6 17 0.0001 0.027 16.7 2.2 1 23 176 198 176 198 0.97 7 17 0.00028 0.075 15.3 2.6 1 23 204 226 204 226 0.95 8 17 4.5 1.2e+03 2.1 5.5 3 22 234 253 232 253 0.92 9 17 0.048 13 8.3 2.7 1 23 543 566 543 566 0.98 10 17 0.24 62 6.1 2.2 1 23 590 612 590 612 0.94 11 17 0.14 37 6.8 0.9 1 23 620 644 620 644 0.93 12 17 0.00011 0.028 16.6 0.9 1 23 648 670 648 670 0.98 13 17 0.0022 0.58 12.5 0.2 2 21 682 701 681 702 0.92 14 17 0.00023 0.061 15.5 0.4 1 23 710 732 710 732 0.94 15 17 7.6e-06 0.002 20.2 1.6 1 23 738 761 738 761 0.97 16 17 3.5e-05 0.0092 18.1 0.2 1 23 767 789 767 789 0.98 17 17 0.0019 0.5 12.7 1.6 1 21 795 815 795 816 0.95
Sequence Information
- Coding Sequence
- ATGAGTGAAGTTCCattgcaaaataaaaaggaGAATGACGCTCCCAGTGTCTCCACCACAATGATGGTTCAAATAACAACCGACAAGTCGGGGCCTAAATTAGTTTGCCCTGTTTGCGACAAGGCACTTGTCTCACTTCATGGCTATGTGAAGCACATGAAAAAACACGAACCTCCTGGTGGTTACTTATGCAACTATTGTGATGATCGCTTTTGTCTGGAAGAGCACCTTAAGAAACACAAGgatgaaaaacataaaatccTTGCATGCCAGATATGCCATGAGACTTTTGATTCGCCACAAGAATATCGCACCCACATCAAGGACATTCACAAAGGTATCGATCGACGAATGATCAAGTGTGAAAAATGTGGCATGGAATTCAAGACGGCTCAAGCCGCCAAGAGGCACACAGAGACACAATGTGGTCAAATTAAGCCACATCCATGTGATCAATGCAAAATGGCATTTTATACCAAATACAATTTGGCAGAACACAAAAAGATACACAGTGGAGAGAAAAAGTTCTGCTGTAGCTACTGTGGCAAAAGTTTCATGAGCAATGGAAGATTAGTAATACATGAGAGGAGTCATACCGGTGAGAAGCCCTATAAGTGTGATGTGTGTGGAAAATGCTTCGCCCATCGTGAAAGTATCGTCACTCATTCCTCAATCCATACCGGAGTCAAACTGGTTGTTTGTAAGTGCTGTGGCTCAAGATTTTCCTGTCATTCGAATCTCATCAAACACAGACGAACAAGACCCGAGACGTGTGGCCTGGCGATTTATAACTCCACCAAAGAAACAAAACGAAATGGAAGCTCAAGAAttcctCCTGGCCTTATGTCTTCTGAGATAAAAATTGTTCGGGCAAGCAAAGTTATAAAACCCAACGAAGAACAAAAAAAGCCCAAGCCAGTCAATCCTAATGAAGAACAAAAGAAGCCCAAAGTTACAAAGCCAAGGGCGAGAcccaaaaaaatcaaatctgaTTCAGAAGacgatggtgatgatgatgccGAAGAAGTTATCATAGCTAGACCAAGGCGCAGTCTTCGTTCGAAGGAACCCAAAGCTATGGAAGAAATCGACAGCAAACCACCAGAATCACCTTCGAGGGATTTCGATTCTGACAACTATAGCGATGATCCACTATTCGATAGCCCAATGCACTCAGTCGATTCCTCTGATAGCGAAAAGCCAATAGTCAAACCAGAGCCCTTGGAAAAAATTCCAACTAACGTTGCAACTCTAGATGATGCTTCAGTTAAATCCGAAGAAGACCAAAAGGGCGAGGATTTCTTCAAGCAACAGGAGGAAATTTTAGAAAAGTTTCTATCCGAGAATACAACAGTCGAACTCAAATATGAGCCTTTAGTTGAAATCAAAGAAGAATCAGAAGATGTAAAGAAAGACGAGGATCTGCCCTGTGAAGTGGTTCCTaaggatgaaaatgaaaaaaagattcCCACAAAGAGAACTAGGCGGAAAAAGTCAGATAACGTTCCTGAGGGCGACACAACCGATGAAAAGAAAATCGACTTGGAAGATTCAGAACATCCAAAAAAGAGGCGTCAGCGTTCGGCTTTGCGAAAAAAACTCCGCCTCTTCAAAAAGGAACGAGTTTATGAATGCAAATTTTGTGCTAAGGTGTATCATATTAAGAAACCCTACGAGAAACATCTTCGTACTCTGCACAAAAAGTCCGACGATGAGCTACGGGAATTGTTTAAGGACGAAGATAATGACATTCCAGATGAATATGTGCATCGCTGTCCGATTTGTTCGAAGATCTATCTAATGGCTAAGCGGCTGAAGACTCATATGACTTTCCATGGTCCCGATGGAAGTTTAGTTCACAAATGTCCTGGCTATTgcaaaatgtattttcaaacaaaagaacAAGCCATGGACCATGCCAAGGAAGCTCATAAAGAGTGTTTTTATTGTGACATCTGCGATAAGTACTCACAATCGCCGGATTCTCTTAAGATCCACAAACGGACGCACTTCGAACAAAGAAGACAAGCAAATCGCAATTTGATATGTGATAAATGTGCCAAATCGTTTGCAAGTCGGACATCGCTTAACGATCACTCAAGGTCGAATTGTGGAAAAGATCCACTCTATCGGTGTGATATTTGTGATAAGAAATTTAGCACAGCTGGTATTTTGAAGACACATTCTTTGTTGCATAAGGATGAAACGCCCTATGCATGTGATAAGTGTGGAaagacttttaaaattaaagccCAGTATAAGACACACATTAAGATGAAGCACACCGACAATAAACCTTTCAAGTGTGAGCTCTGCCCCAAAGCATATCCATATCGAGAAAGCCTTTTAACACACATGACTGTTCATACTGGACTCAAACGTTATTCCTGCAATGGATGCAGCAAACGGTTTACTTGTATATCAAATCTTCAAGCCCATCGCAAAGTTTATGCAGATACTTGTGGATTGCAGCCGTTAAATTCAAAACCAAGCACTTATTTAGGTGTGCAGAAGGGCATGCTTCTGATGGGCACAAAAccttcatattaa
- Protein Sequence
- MSEVPLQNKKENDAPSVSTTMMVQITTDKSGPKLVCPVCDKALVSLHGYVKHMKKHEPPGGYLCNYCDDRFCLEEHLKKHKDEKHKILACQICHETFDSPQEYRTHIKDIHKGIDRRMIKCEKCGMEFKTAQAAKRHTETQCGQIKPHPCDQCKMAFYTKYNLAEHKKIHSGEKKFCCSYCGKSFMSNGRLVIHERSHTGEKPYKCDVCGKCFAHRESIVTHSSIHTGVKLVVCKCCGSRFSCHSNLIKHRRTRPETCGLAIYNSTKETKRNGSSRIPPGLMSSEIKIVRASKVIKPNEEQKKPKPVNPNEEQKKPKVTKPRARPKKIKSDSEDDGDDDAEEVIIARPRRSLRSKEPKAMEEIDSKPPESPSRDFDSDNYSDDPLFDSPMHSVDSSDSEKPIVKPEPLEKIPTNVATLDDASVKSEEDQKGEDFFKQQEEILEKFLSENTTVELKYEPLVEIKEESEDVKKDEDLPCEVVPKDENEKKIPTKRTRRKKSDNVPEGDTTDEKKIDLEDSEHPKKRRQRSALRKKLRLFKKERVYECKFCAKVYHIKKPYEKHLRTLHKKSDDELRELFKDEDNDIPDEYVHRCPICSKIYLMAKRLKTHMTFHGPDGSLVHKCPGYCKMYFQTKEQAMDHAKEAHKECFYCDICDKYSQSPDSLKIHKRTHFEQRRQANRNLICDKCAKSFASRTSLNDHSRSNCGKDPLYRCDICDKKFSTAGILKTHSLLHKDETPYACDKCGKTFKIKAQYKTHIKMKHTDNKPFKCELCPKAYPYRESLLTHMTVHTGLKRYSCNGCSKRFTCISNLQAHRKVYADTCGLQPLNSKPSTYLGVQKGMLLMGTKPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694877;
- 90% Identity
- iTF_00665057; iTF_00426562; iTF_00894187; iTF_00664280; iTF_00427503;
- 80% Identity
- -