Eeli006292.2
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- -
- Assembly
- GCA_951394125.1
- Location
- OX596028.1:98210450-98223404[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00088 0.082 13.9 0.1 2 23 57 78 56 78 0.97 2 17 0.046 4.2 8.5 4.8 1 23 84 107 84 107 0.91 3 17 0.0004 0.037 15.0 0.4 3 23 112 133 110 133 0.94 4 17 0.008 0.75 10.9 0.1 2 21 142 161 141 162 0.92 5 17 0.00015 0.014 16.3 2.7 1 23 170 192 170 192 0.98 6 17 0.00012 0.011 16.6 2.2 1 23 198 220 198 220 0.97 7 17 0.00033 0.031 15.2 2.6 1 23 226 248 226 248 0.95 8 17 5.3 4.9e+02 2.0 5.5 3 22 256 275 254 275 0.92 9 17 0.011 1.1 10.4 2.6 1 23 562 585 562 585 0.98 10 17 0.28 26 6.1 2.2 1 23 609 631 609 631 0.94 11 17 0.37 34 5.7 1.7 1 23 639 663 639 663 0.93 12 17 0.0001 0.0093 16.9 1.2 1 23 667 689 667 689 0.98 13 17 0.0026 0.24 12.4 0.2 2 21 701 720 700 721 0.92 14 17 0.00024 0.022 15.7 0.4 1 23 729 751 729 751 0.94 15 17 1.2e-05 0.0011 19.8 1.7 1 23 757 780 757 780 0.97 16 17 4.1e-05 0.0038 18.1 0.2 1 23 786 808 786 808 0.98 17 17 0.0022 0.21 12.7 1.6 1 21 814 834 814 835 0.95
Sequence Information
- Coding Sequence
- ATGGAGCTTTCAGAAGAAGCACAAGAATCAAGGAATGAAGACTACAAGCGATATCGATACCAGAATACCTATACCTGCATGGTTTTACGGAAACGTCAAAATGAAGCTTCTAGCGTCACCTCTACAATGATGGTTCAAATAACTACCGATAAGAGTGGACCGAAATTAGTTTGTCCTGTCTGTAATAAAGCCCTTGTCTCACTCAATGGCTATGTAAAGCACATGAAAAAACATGAACCTCCTGGTGGTTACGTATGCAACTACTGTGATGATCGATTTTGCCTTGAAGATCACCTCAAGAAACATAAAGATGAAAAACATAAGATTCTTGCATGCCAGATATGCCATGAGACATTCGATTCGCCGCAAGATTATCGCACTCACATCAAGGACATTCACAAAGGCATCGATCGACAAATGATCAAGTGTGAAAAATGTGGGGTGGAGTTCAAGACAGCTCAAGCCGCCAAGAGGCACACCGAGACACAATGTGGTCAAATTAAGCCACATCAGTGTGATCAATGTAAAATggcattttatacaaaatacaactTGGCTGAGCACAAAAAGATCCACAGCGGAGAGAAAAAGTTCTGCTGTAGCTATTGTGGGAAGAGTTTTATGAGTAATGGAAGATTAGTAATACATGAAAGAAGTCATACTGGCGAAAAGCCCTATAAGTGCGATGTCTGTGGCAAATGCTTTGCCCATCGTGAAAGTATCGTCACTCATTCCTCAATACATACCGGAGTTAAACTGGTTGTTTGTAAATGCTGTGGCTCAAGATTCTCCTGTCATTCGAATCTTATCAAACACAGACGAACGAGACCTGATACGTGCGGCCTGGAAATTTATAACGCCACCAAAGAAACAAAACGAAATGGAAACTCAAGAATTCCTCCCGGCCTGATGTCTTCTGAGATAAAAATTGTTCGAGCAAGCAAAGTTATAAAACCCAACGAAGAGAACAAAAAGCTCAAGACTGCCAATCCCAATGAAGAGGAAAAGAAGCCAAAGAAGTCTAAGGCAAggcccaaaaaaataaaatccgattcagaagacgacgatgatgataatgatagtGAAGAAGTTATTATAGCAAGACCAAGGCGAAGTCTTCGTTCTAAGGAACCAATTCCAATTGAAGAAATTGATAGTAAACCACCAGATTCACCTTCAAAAGATTTCGATTCCGATAATTATAGCAATGATCCACTTTTTGATAGCCCAATGCAATCTGTTGATTCCTCCGATAGCGAAAAGCCTGCAGTCAAACCAGAGCCTTTGGAAAAAACCCCAGTTAATACAGTTGATACTCCAGTTAAAACCGAAGAAGACCAAAAAGGCGAGGATTTCTTCGGACAACAGGaggaaattttagaaaaatttctatCCGAAAATACAGTAGAAGTGAAATATGAACCTTTAGTTGAAATCAAAGAAGAAtcagaagatttaaaaaaagacgaGTATCCGCCTCTTAAGCCCTGTCGAGTGTTACTTGAAgccgaaaatgaaaaaaaatctccaaggAAGAGAACTAGAAGAAAGAAGACAGATTCTATTCCTGAAGGCTCtatcgatgaaaaaaaaatcgattcggAGGAAACAGAACTTCCAAAAAAGAGACGTCAACGTTCGGCGTTGCGTAAGAAACTTCGCTTCTTCAAAAAGGAACGAGTGTATGAATGCAAATATTGTGCGAAGGTTTATCATATAAAGAAACCCTACGAGAAACATCTTCGGACTCTGCATAAAAAGTCGGAAGATGAGCTACGGGAATTGTTTAAAGACGAAGATAATGACATTCCAGATGAATATGTGCATCGCTGTCCGATCTGTTCGAAGATCTATCTTATGGCGAAACGACTGAAGACTCATATGACATTCCATGgtCCCGATGGAAGTTTAGTTCACAAATGTCCTGGTTATTGCAAAATGTATTTCCATACAAAAGAAGAAGCCATGGAACATGCAAAGGAAGCCCATAAGGAGTGTTTTTATTGTAACATCTGCGATAAGTACTCACAATCGCCTGATTCTCTTAAGATTCATAAACGGACGCATTTCGAGCAAAGGAGGCAAGCAAATCGTAATTTGATTTGTGATAAATGTGCTAAGTCTTTTGCAAGTCGGACATCGCTTAACGACCATTCGAGGTCAAATTGTGGAAAAGATCCACTCTACCGTTGTGATATTTGTGATAAGAGATTCAGCACAGCTGGTATTTTGAAAACACATTCTTTGTTACATAAGGATGAAACACCTTTTGCATGTGATAAATGTGGaaagacttttaaaattaaagcccAGTATAAGACACACATTAAAATGAAGCACACCGACAATAAGCCCTTCAAGTGTGAGCTTTGTCCAAAAGCATATCCTTATCGAGAAAGCCTTTTAACACACATGACTGTTCATACAGGACTCAAACGTTATTCATGCAATGGATGCAGCAAAAGGTTTACTTGTATATCAAATCTTCAAGCTCATCGCAAAGTTTATGCTGATACTTGTGGATTACAGCCGTTAAATTCAAAACCAAGCACTTACTTAGGTGTACAAAAGGGCATGCTTCTGATGGGAACAAAACCTTCTTATTAG
- Protein Sequence
- MELSEEAQESRNEDYKRYRYQNTYTCMVLRKRQNEASSVTSTMMVQITTDKSGPKLVCPVCNKALVSLNGYVKHMKKHEPPGGYVCNYCDDRFCLEDHLKKHKDEKHKILACQICHETFDSPQDYRTHIKDIHKGIDRQMIKCEKCGVEFKTAQAAKRHTETQCGQIKPHQCDQCKMAFYTKYNLAEHKKIHSGEKKFCCSYCGKSFMSNGRLVIHERSHTGEKPYKCDVCGKCFAHRESIVTHSSIHTGVKLVVCKCCGSRFSCHSNLIKHRRTRPDTCGLEIYNATKETKRNGNSRIPPGLMSSEIKIVRASKVIKPNEENKKLKTANPNEEEKKPKKSKARPKKIKSDSEDDDDDNDSEEVIIARPRRSLRSKEPIPIEEIDSKPPDSPSKDFDSDNYSNDPLFDSPMQSVDSSDSEKPAVKPEPLEKTPVNTVDTPVKTEEDQKGEDFFGQQEEILEKFLSENTVEVKYEPLVEIKEESEDLKKDEYPPLKPCRVLLEAENEKKSPRKRTRRKKTDSIPEGSIDEKKIDSEETELPKKRRQRSALRKKLRFFKKERVYECKYCAKVYHIKKPYEKHLRTLHKKSEDELRELFKDEDNDIPDEYVHRCPICSKIYLMAKRLKTHMTFHGPDGSLVHKCPGYCKMYFHTKEEAMEHAKEAHKECFYCNICDKYSQSPDSLKIHKRTHFEQRRQANRNLICDKCAKSFASRTSLNDHSRSNCGKDPLYRCDICDKRFSTAGILKTHSLLHKDETPFACDKCGKTFKIKAQYKTHIKMKHTDNKPFKCELCPKAYPYRESLLTHMTVHTGLKRYSCNGCSKRFTCISNLQAHRKVYADTCGLQPLNSKPSTYLGVQKGMLLMGTKPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694877;
- 90% Identity
- iTF_00335299;
- 80% Identity
- -