Basic Information

Insect: Cheilosia scutellata
Gene Symbol: su(Hw)
Assembly: GCA_955612985.1
Location: OY015312.1:33404954-33408467[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0073 0.86 10.9 1.6 1 20 119 138 119 140 0.93

2 13 3.6e-06 0.00043 21.3 0.4 3 23 191 212 189 212 0.92

3 13 0.018 2.1 9.7 0.0 1 23 218 240 218 240 0.97

4 13 9.6e-05 0.011 16.9 5.7 1 21 247 267 247 268 0.94

5 13 2.9e-05 0.0034 18.5 1.1 3 23 281 301 281 301 0.98

6 13 0.00018 0.021 16.0 6.2 1 23 312 334 312 334 0.99

7 13 4.7e-06 0.00055 21.0 0.9 1 23 340 362 340 362 0.97

8 13 2.8e-06 0.00033 21.7 0.3 1 23 368 390 368 390 0.99

9 13 8.4e-06 0.00098 20.2 5.0 1 23 396 418 396 418 0.98

10 13 6e-06 0.00071 20.7 2.4 1 23 422 444 422 444 0.99

11 13 0.00088 0.1 13.8 0.0 2 23 455 478 454 478 0.91

12 13 0.16 19 6.7 1.2 3 23 486 507 485 507 0.96

13 13 0.00092 0.11 13.8 5.8 1 23 512 535 512 535 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0073	0.86	10.9	1.6	1	20	119	138	119	140	0.93
2	13	3.6e-06	0.00043	21.3	0.4	3	23	191	212	189	212	0.92
3	13	0.018	2.1	9.7	0.0	1	23	218	240	218	240	0.97
4	13	9.6e-05	0.011	16.9	5.7	1	21	247	267	247	268	0.94
5	13	2.9e-05	0.0034	18.5	1.1	3	23	281	301	281	301	0.98
6	13	0.00018	0.021	16.0	6.2	1	23	312	334	312	334	0.99
7	13	4.7e-06	0.00055	21.0	0.9	1	23	340	362	340	362	0.97
8	13	2.8e-06	0.00033	21.7	0.3	1	23	368	390	368	390	0.99
9	13	8.4e-06	0.00098	20.2	5.0	1	23	396	418	396	418	0.98
10	13	6e-06	0.00071	20.7	2.4	1	23	422	444	422	444	0.99
11	13	0.00088	0.1	13.8	0.0	2	23	455	478	454	478	0.91
12	13	0.16	19	6.7	1.2	3	23	486	507	485	507	0.96
13	13	0.00092	0.11	13.8	5.8	1	23	512	535	512	535	0.96

Sequence Information

Coding Sequence: ATGGCCATGTCCCATTTGAGGGCATCAAAAAGGGCACTTCCTTCTAAACGGAATAGTAATGTGCGACTTCATAACGCCACGAAACAAGCAAAACTTTCAAAGAAACCTGAGCTAGACTCGGAAATTGAATTTGTTAAAGATGATCCGGAGGCACCAACTCAACACTATTTAATAACAGAATTCAAAGGCGATGAAGAGAACGAAATTGATCTTGTACTAACACAAAATCGAACTTCAGACAAAAACGATCAACCAGCTGAATGTGTCGAAGAGATTCATTTCGATGAGCTACATGGCGATGAAGGAGGCAATAATAGCGACGACGAAAACGTTAATACACGGGAAATTATCGAACATGTCTGTGGCAAGTGTTTTAAATCATTTCGTTTGTTAAAGGCATTTAAACGTCATCTGGCGTACTGTATTTTTAACAGTGAAATGGTATTGAGAAGAGCAGAAATGCAAAAGAACATAGTAAAGATCGAGAAGGAGGCCATTGCCATGGAAAAGAAAgacatttgtttttgttgtggcGACAACTATGATACCTGCCACTTGGGCCACATAAACTGCTCCGAATGTCCGAAAACCTTTAAGACCCAAATATCGCTTGAGCGCCATATGTTCCTTATTCATTCGGAAAAAGGCGATTTCCCATGTGACATCTGCAATGGTAGTATTCGCACGGAAGCATTGCTGAAACTGCACATTGAGCAACACAAAAATCGCGGCAAGCcgtttgcatgtaaaacctgCGGAAAAGATTTTACGCGACTGTATCATTTGAAACGGCATCATAAACACTCGGCATGTGGTGATGGATTACCTGAAACTATGGGTTGTAAGGTTTGTGGAAAAAAATTCTTCCGGATGGACAACTTGCGTGTCCATCTGAAGGCACATTTGGGTCAGGGTACACCCAAGAAACCCGAATACACATGCCCATGCTGCAAGAAGTGCTTCTACAGTTTGTCTACTCTAAACATTCACATTCGAACTCATACTGGGGAACGTCCTTTTGATTGTGATATTTGTGACAAGAATTTTCCATCGTTGGTCTCGCTGAAGAAGCACAGGAGATATCACACAGGCGAGAAGCCATATACATGTGAAattTGTGGCCAAAACTTTGCGGTCAAAGAAGTTCTCAACCGCCACATGAAACGACACACTGGTGAAAAGCCACATGTCTGCTTGCATTGCAATAAACGCTTCATCCAAGCCACCCAATTGAAAAACCATTTGCGTACACACGAGCGACCATATGAATGCACTGAGTGCCCTGAGAAATTCAAAACTGAAAAGCAATTTGAAAAACACTACAAGACGCACAAAACGAAAAAGGCTTGGAAGGATTCTGTCACTTGTGCTGATTGTGAAATAGAATTTGCCAGTAAATCCGCCCTAGCAAAGCATGAGAAGACCGCTGAACATATTGAAAACGTAGCGAAATTTTGTCCTGAATGTGGCATTAAATGCGACGACATGAAGTCCCTAGAATTCCATATGCTTAAAAGTCATGAAGGCACTGAATATAAGTGCGATAAATGCGATTCTACTTTTCGACAACTCCATTTGTTACAACATCACAAGAAAAATGCCCACAGCACGAGTCCAGATAAACAATCTTTTGAAATATCTGTAGATACAGTGAAGAATGAAGCGAATAACTGCATCATACTTGAGGAATACATCGTGGACTCGTTTGCAACAGAAGTGAGTGAGAGCGACCAAAAGCAATTCACAGTGATTGCCGAAGATAATGAGGTGTCTCCGGACTTTAAGGAAagcaagcaaaaaataaaaaataaatcaccaACAGTTAGAGCCGAACTTAAAAAGTCCCTAGTGAATTGTTTGCGCGAAGATCCAGCGGAGAAATTAGTTGAGAATGCCATGAGCGCGGACGATGTAGAAATCAGCGAGAATGTTGGTAAATTGCTTGATCTGCTAGTAGATGTAGAAACGCTTGGAAAATTTGGCTGGCCACAGGATTCTGTTGAGAATgTTCTTTGTAAGGTGATTGAGAACTGTGGCTATAATCTGTACCAGACGAAATTCACTGATGAATACGGCACCAGGATGAGGGAATATGTCAAACTTATGTTCACCGTGGTCATACAAAATGATTCAATCAAGGAGCTCTTGAACAACTATCCAATTGATGAGGTTATAGCGTTTGTTCTTTCCAATGAAGACGACGAGttgaaattgtaa
Protein Sequence: MAMSHLRASKRALPSKRNSNVRLHNATKQAKLSKKPELDSEIEFVKDDPEAPTQHYLITEFKGDEENEIDLVLTQNRTSDKNDQPAECVEEIHFDELHGDEGGNNSDDENVNTREIIEHVCGKCFKSFRLLKAFKRHLAYCIFNSEMVLRRAEMQKNIVKIEKEAIAMEKKDICFCCGDNYDTCHLGHINCSECPKTFKTQISLERHMFLIHSEKGDFPCDICNGSIRTEALLKLHIEQHKNRGKPFACKTCGKDFTRLYHLKRHHKHSACGDGLPETMGCKVCGKKFFRMDNLRVHLKAHLGQGTPKKPEYTCPCCKKCFYSLSTLNIHIRTHTGERPFDCDICDKNFPSLVSLKKHRRYHTGEKPYTCEICGQNFAVKEVLNRHMKRHTGEKPHVCLHCNKRFIQATQLKNHLRTHERPYECTECPEKFKTEKQFEKHYKTHKTKKAWKDSVTCADCEIEFASKSALAKHEKTAEHIENVAKFCPECGIKCDDMKSLEFHMLKSHEGTEYKCDKCDSTFRQLHLLQHHKKNAHSTSPDKQSFEISVDTVKNEANNCIILEEYIVDSFATEVSESDQKQFTVIAEDNEVSPDFKESKQKIKNKSPTVRAELKKSLVNCLREDPAEKLVENAMSADDVEISENVGKLLDLLVDVETLGKFGWPQDSVENVLCKVIENCGYNLYQTKFTDEYGTRMREYVKLMFTVVIQNDSIKELLNNYPIDEVIAFVLSNEDDELKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315376; iTF_00316196; iTF_00314565; iTF_00311239; iTF_00312027;
90% Identity: -
80% Identity: -