Basic Information

Insect: Cheilosia pagana
Gene Symbol: su(Hw)
Assembly: GCA_936435595.1
Location: CAKZFE010000066.1:3989282-3994296[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.017 1.5 9.6 1.3 1 20 121 140 121 142 0.93

2 12 2.8e-06 0.00025 21.5 0.4 3 23 193 214 191 214 0.92

3 12 0.059 5.3 7.9 0.0 1 23 220 242 220 242 0.96

4 12 2.8e-05 0.0025 18.4 5.7 1 21 249 269 249 270 0.94

5 12 2.6e-05 0.0023 18.5 1.1 3 23 283 303 283 303 0.98

6 12 0.00016 0.014 16.0 6.2 1 23 314 336 314 336 0.99

7 12 4.2e-06 0.00038 21.0 0.9 1 23 342 364 342 364 0.97

8 12 0.00016 0.015 16.0 0.9 1 23 370 392 370 392 0.99

9 12 7.5e-06 0.00068 20.2 5.0 1 23 398 420 398 420 0.98

10 12 7.7e-06 0.00069 20.2 2.5 1 23 424 446 424 446 0.98

11 12 0.0013 0.12 13.2 0.5 2 23 457 480 456 480 0.90

12 12 0.073 6.5 7.7 1.4 3 23 488 509 487 509 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.017	1.5	9.6	1.3	1	20	121	140	121	142	0.93
2	12	2.8e-06	0.00025	21.5	0.4	3	23	193	214	191	214	0.92
3	12	0.059	5.3	7.9	0.0	1	23	220	242	220	242	0.96
4	12	2.8e-05	0.0025	18.4	5.7	1	21	249	269	249	270	0.94
5	12	2.6e-05	0.0023	18.5	1.1	3	23	283	303	283	303	0.98
6	12	0.00016	0.014	16.0	6.2	1	23	314	336	314	336	0.99
7	12	4.2e-06	0.00038	21.0	0.9	1	23	342	364	342	364	0.97
8	12	0.00016	0.015	16.0	0.9	1	23	370	392	370	392	0.99
9	12	7.5e-06	0.00068	20.2	5.0	1	23	398	420	398	420	0.98
10	12	7.7e-06	0.00069	20.2	2.5	1	23	424	446	424	446	0.98
11	12	0.0013	0.12	13.2	0.5	2	23	457	480	456	480	0.90
12	12	0.073	6.5	7.7	1.4	3	23	488	509	487	509	0.96

Sequence Information

Coding Sequence: ATGGCTAGCTGGGAGCTGGATAGGGCATCCAAAAGAGCACTCCCTTCAAAGGCGAGTAGTAGTGTGCTTCTTTTGAACGCatcgaaaaaatcaaaactcaCAAAACAACCTGAGCCAGACTCAGATATTGAATTTGTCAAAGATGATCCGGAAGCGCCAACTCAACATTACCTGATAACAGAATTCAAAGGCGATGAGGACAACGAGATTGATCTCGTATTCACACAAAATAGATCTGCAGACGAAAGTTGTCAACCAGCCGAATGTATCGAAGAAATCCACTTCAATGAGCTTCATGGCGATGAAGGGGACAATAATAGCGAcggtgaaaataaaattaacacacGGGAAATCATCGAACATGTCTGTGGCAAGTGTTTCAAATCGTTTCGATTGATAAAGGCATTTAAACGTCATTTGGCGTACTGTATTTTTAACAGCGAAATGGTATTGCGAAGAGCAGAAATGCAGAAGAACATCGCTAAGATCGAAAAGGAGGCCATTGGCATGGAAAAGAAAGATATCTGTTTCTGTTGCGGTGATAACTACGATACCTGTCACTTGGGCCATATAAATTGCACCGAGTGCCCGAAAACATTCAAGACACAAATCTCGCTTGAACGTCACATGTTTCTCATCCATTCGGAAAAGAATGATTTCCCTTGTGATATCTGCAATGGCAATATTCGAACGGAAGCACTATTGAAATTGCACATTGAGCAGCACAAAAACCGTGGCAAGCCGTTTGCCTGCAAAACCTGTGGAAAGGACTTTACACGACAGTACCATTTGAAACGGCATCATCAACACTCGGCGTGTGGTGAGGGATTACCTGAAACTATGGGTTGTAAGGTGTGTGGCAAGAAATTCTTTCGAATGGACAACTTGCGTGTCCATCTAAAGGCCCACTTGGGTCAGGGTACACCCAAGAAAGCCGAGTATACATGCCCGTGCTGCAAAAAGTGCTTCTACAGTTTGTCAACTCTAAACATTCACATTCGAACTCATACTGGCGAGCGGCCTTTTGATTGTGATATTTGCGACAAGAATTTTCCATCGCTGGTCTCGCTGAAAAAACACAGGAGATATCACACAGGCGAGAAGCCATACACATGCGATGTTtgCAGTCAAAATTTTGCGGTCAAAGAAGTCTTCAACCGTCACATGAAACGACACACGGGTGAAAAACCACATGTCTGCTTGCATTGCAACAAACGCTTTATTCAAGCTACCCAATTGAAGAACCATTTGCGTACACACGAGCGACCATTTGAATGCACCGAATGCCCTGAGAAATTCAAAACCGAAAAGCAATTTGAAAAGCACTACAAGACGCACAAAGGGAAAAACGCATTGAAGGCTTCTTGCACTTGCGTGGACTGTGAGTTGCAATTTCCCAGTAAAGCCGCCCTAACAAGGCACGAGAAGACCGCTATCCATATTGaaaacgcaaagaaattttgcCCTGAATGTGGCATTAAATGCGACGATCTGAAGTCCCTAGAATTCCATATGCTTAAAAAGCATGAAACCACTGAATACAAGCGCGATAAGTGCGAACTTGCCTTTCGACAACTCCATTTGTTGCAACATAACAAGAAAACCGTTCCAAGCAAgAGTCCAGCTAAACCATCCGTCGACATATCCGTAGATACAGTgaagaatgaaatgaatgactGTGTTGTGCTAGAGGAATTCATCGTGGACTCGTTCGCAACAGAAGTGAGTGAGAATGACCAAAAACAATTCACAGTGATTGCCCAGGAAAATGATGTGTCGCCGGACTTCAAGAAAAGCAAAcaggaaattaagaaaaagacaCCAACACTTCGAGCCGAAATAAAAGAGTCCCTGGTGAAGTGTTTGCGCGATGATCCAGCTAAAAAAGTAGTTGAGAATGTCATGAGTGCGGACGATTTGGAGATCAGCGAGAATGTTGgtaaattgcttgatatgctaGTAGACGTAGAGACGCTTGGAAAATTTGGCTGGCCACAAGATCCTGTTGAGAATGTTCTATGTAAGGTGATTGAGAACTGCGGCTATAATCTGTACAAGACGAAATTCACCGAAGATTACGGCACAAGGATGAGGGAATATGTCAAGCTTATGTTCACCGTGGTCATACAAAATGATTCAATCAAGGAGCTCTTGAATAATTACCCCATCGATGAGGTTATTGCGTTTGTGCTCTCCAATGAAGACGACGagttgaaaatgtaa
Protein Sequence: MASWELDRASKRALPSKASSSVLLLNASKKSKLTKQPEPDSDIEFVKDDPEAPTQHYLITEFKGDEDNEIDLVFTQNRSADESCQPAECIEEIHFNELHGDEGDNNSDGENKINTREIIEHVCGKCFKSFRLIKAFKRHLAYCIFNSEMVLRRAEMQKNIAKIEKEAIGMEKKDICFCCGDNYDTCHLGHINCTECPKTFKTQISLERHMFLIHSEKNDFPCDICNGNIRTEALLKLHIEQHKNRGKPFACKTCGKDFTRQYHLKRHHQHSACGEGLPETMGCKVCGKKFFRMDNLRVHLKAHLGQGTPKKAEYTCPCCKKCFYSLSTLNIHIRTHTGERPFDCDICDKNFPSLVSLKKHRRYHTGEKPYTCDVCSQNFAVKEVFNRHMKRHTGEKPHVCLHCNKRFIQATQLKNHLRTHERPFECTECPEKFKTEKQFEKHYKTHKGKNALKASCTCVDCELQFPSKAALTRHEKTAIHIENAKKFCPECGIKCDDLKSLEFHMLKKHETTEYKRDKCELAFRQLHLLQHNKKTVPSKSPAKPSVDISVDTVKNEMNDCVVLEEFIVDSFATEVSENDQKQFTVIAQENDVSPDFKKSKQEIKKKTPTLRAEIKESLVKCLRDDPAKKVVENVMSADDLEISENVGKLLDMLVDVETLGKFGWPQDPVENVLCKVIENCGYNLYKTKFTEDYGTRMREYVKLMFTVVIQNDSIKELLNNYPIDEVIAFVLSNEDDELKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00312856;
90% Identity: iTF_00315376;
80% Identity: -