Basic Information

Insect: Cheilosia urbana
Gene Symbol: su(Hw)
Assembly: GCA_946477595.1
Location: CAMLCJ010000043.1:669322-678690[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.019 3.2 9.6 1.3 1 20 117 136 117 138 0.93

2 13 3.1e-06 0.00052 21.5 0.4 3 23 189 210 187 210 0.92

3 13 0.0044 0.74 11.6 0.2 1 23 216 238 216 238 0.97

4 13 8.2e-05 0.014 17.1 5.7 1 21 245 265 245 266 0.94

5 13 2.8e-05 0.0048 18.5 1.1 3 23 279 299 279 299 0.98

6 13 0.00018 0.03 16.0 6.2 1 23 310 332 310 332 0.99

7 13 1.6e-05 0.0027 19.3 0.9 1 23 338 360 338 360 0.97

8 13 5.1e-06 0.00086 20.9 0.3 1 23 366 388 366 388 0.99

9 13 8.3e-06 0.0014 20.2 5.0 1 23 394 416 394 416 0.98

10 13 8.5e-06 0.0014 20.2 2.5 1 23 420 442 420 442 0.98

11 13 0.0025 0.43 12.4 0.6 2 23 453 476 452 476 0.90

12 13 0.08 13 7.7 1.4 3 23 484 505 483 505 0.96

13 13 6.2e-05 0.01 17.5 5.9 1 23 510 533 510 533 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.019	3.2	9.6	1.3	1	20	117	136	117	138	0.93
2	13	3.1e-06	0.00052	21.5	0.4	3	23	189	210	187	210	0.92
3	13	0.0044	0.74	11.6	0.2	1	23	216	238	216	238	0.97
4	13	8.2e-05	0.014	17.1	5.7	1	21	245	265	245	266	0.94
5	13	2.8e-05	0.0048	18.5	1.1	3	23	279	299	279	299	0.98
6	13	0.00018	0.03	16.0	6.2	1	23	310	332	310	332	0.99
7	13	1.6e-05	0.0027	19.3	0.9	1	23	338	360	338	360	0.97
8	13	5.1e-06	0.00086	20.9	0.3	1	23	366	388	366	388	0.99
9	13	8.3e-06	0.0014	20.2	5.0	1	23	394	416	394	416	0.98
10	13	8.5e-06	0.0014	20.2	2.5	1	23	420	442	420	442	0.98
11	13	0.0025	0.43	12.4	0.6	2	23	453	476	452	476	0.90
12	13	0.08	13	7.7	1.4	3	23	484	505	483	505	0.96
13	13	6.2e-05	0.01	17.5	5.9	1	23	510	533	510	533	0.98

Sequence Information

Coding Sequence: ATGATTTATAGGGCATCCAAAAGAGCTCTGCCTTCAAAGCCGAGTAAGAGTGTCTTACTTTTGAACGCATCGAAAAAATCAAAACTCGCAAAAAAACCTGAACCAGACTCAGATATTGAATTAGTCAAAGATGATCCAGAGGCGCCAACTCAACATTACCTGATAACAGAACTCAAAGGCGATGAGGACAACGAGATTGATCTTGTTCTTACACAAAACCGATCTCCAGACGAAAGTGGTCAGCCAGCCGAATGTGTTGAAGAGATCCACTTCAATGAGCTACATAGCGATGCAGGGGGCGATAATAGCGACAGTGAGAACAACATTAACACACGGGAAATTATCGAACACGTCTGTGGCAAGTGTTTCAAATCATTTCGATTGATAAAGGCATTTAAACGTCACCTGGCCTACTGTATTTTTAACAGcgaaatggtattgcgaagagcAGAAATGCAAAAGAACATTGAAAAGATCGAAAAGGAGGCCATTAGCATGGAAAAGAAAGATATCTGTTTCTGCTGCGGCGACAACTACGACACCTGTCACTTGGGTCACATAAACTGCACCGAATGCCCAAAAACCTTTAAGACACAAATCTCACTTGAACGGCACATGTTTCTTATTCATTCGGAAAAGAACGATTTTCCATGTGATACCTGCAATGGCAGTATTCGAACGAAAGCACTGTTGAAATTACACATGGAGCAACACAAAAACCGTGGCAAGCCGTTTGCTTGCAAAAACTGTGGAAAGGACTTTACACGACTGTATCATTTGAAACGGCATCATAAGCACTCTGCGTGTGGTGAGGGATTACCTGAAACTATGGGTTGCAAGGTGTGTGGCAAGAAATTCTTTCGCATGGACAACTTGCGTGTCCATCTGAAGGCTCATTTGGGTCAGGGTACACCCAAGAAGGCCGAGTATACATGCCCGTGCTGCAAAAAGTGTTTCTACAGTTTGTCAACTCTAAACATTCACATTCGAACTCATACTGGCGAGCGGCCTTTTGACTGTGATATTTGTGAAAAGAATTTTCCATCGCTGGTCTCGCTGAAGAAGCACAGGAGATATCACACAGGCGAGAAGCCATACACATGTGATGTTtGTGGCCAAAACTTTGCGGTGAAAGAAGTCCTCAACCGCCACATGAAACGACACACTGGTGAAAAACCACATGTCTGCTTGCATTGCAACAAACGCTTTATTCAAGCCACCCAATTAAAGAACCATTTGCGTACACACGAGCGACCATTTGAATGCACCGAGTGCCCAGAGAAATTCAAAACAGAAAAGCAATTTGAGAAGCACTACAAGACGCACAAATCGAAAAAGGCATGGAAAGCGTCTTGCACTTGCGTAGATTGTGAGTTGCAATTTCCCAATCGAGCCGCCCTAACAAAGCACGAGAAGACCGCTCTCCATATTGAAAACGTGAAGAAATTCTGTCCTGAATGTGGCATTAAATGCGACGATCTGAAGTCCCTAGAATTCCATATGCTTAAAAAGCATGAAACCACTGAATACAAGTGCGATAAGTGCGATTTAACTTTTCGACAACTGCATTTGTTGCAACACCACAAGAAAACCGTTCACAACACGGATCCAGCTCAACCATCATTCGTGATACCCGTTGATGCAGTGAAGAATGAAATGAAAGACTGCATTATACTTGAGGAATTCCTCGTCGACTCGTTCGCAACAGAAGTGAGTGAGAACGACCAAAAGCAATTCACAGTGATTGCCCAAGAAAATGGTGTGTCGCCGGACTTTAAGCAAAGCAAACaggagataaaaaaaatgtcacccACAGTTCGAGCCGAACTAAAGGAGTCCCTGGTGAATTGTTTGCGCGAAGATCGAACTAAAAAAGTAGTTGAGAATGTCATGAGCGCGGACGATGTGGAAATCAGCGAGAATGTTGGTAAATTGCTTGATATGCTAGTAGACGTAGAGACGCTTGGAAAATTTGGCTGGCCACAAGATTCTGTTGAGAATgTTCTTTGTAAGGTAATTGAGAACTGTGGCTATAATCTGTACAAGACGAAATTCACCGAAGAATACGGCACAAGGATGAGGGAATATGTCAAACTTATGTTTACCGTGGTCATACAAAATGATTCGATTAAGGAGCTCTTGAATAATTATCCAATCGATGAAGTTATTGCGTTTGTGCTTTCCAATGAAGACGACGAGttgaaattgtaa
Protein Sequence: MIYRASKRALPSKPSKSVLLLNASKKSKLAKKPEPDSDIELVKDDPEAPTQHYLITELKGDEDNEIDLVLTQNRSPDESGQPAECVEEIHFNELHSDAGGDNSDSENNINTREIIEHVCGKCFKSFRLIKAFKRHLAYCIFNSEMVLRRAEMQKNIEKIEKEAISMEKKDICFCCGDNYDTCHLGHINCTECPKTFKTQISLERHMFLIHSEKNDFPCDTCNGSIRTKALLKLHMEQHKNRGKPFACKNCGKDFTRLYHLKRHHKHSACGEGLPETMGCKVCGKKFFRMDNLRVHLKAHLGQGTPKKAEYTCPCCKKCFYSLSTLNIHIRTHTGERPFDCDICEKNFPSLVSLKKHRRYHTGEKPYTCDVCGQNFAVKEVLNRHMKRHTGEKPHVCLHCNKRFIQATQLKNHLRTHERPFECTECPEKFKTEKQFEKHYKTHKSKKAWKASCTCVDCELQFPNRAALTKHEKTALHIENVKKFCPECGIKCDDLKSLEFHMLKKHETTEYKCDKCDLTFRQLHLLQHHKKTVHNTDPAQPSFVIPVDAVKNEMKDCIILEEFLVDSFATEVSENDQKQFTVIAQENGVSPDFKQSKQEIKKMSPTVRAELKESLVNCLREDRTKKVVENVMSADDVEISENVGKLLDMLVDVETLGKFGWPQDSVENVLCKVIENCGYNLYKTKFTEEYGTRMREYVKLMFTVVIQNDSIKELLNNYPIDEVIAFVLSNEDDELKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00312856;
90% Identity: iTF_00315376;
80% Identity: -