Basic Information

Insect: Cheilosia grossa
Gene Symbol: su(Hw)
Assembly: GCA_963082955.1
Location: OY720144.1:84442987-84446501[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.017 1.7 9.6 1.3 1 20 118 137 118 139 0.93

2 13 2.8e-06 0.00028 21.5 0.4 3 23 190 211 188 211 0.92

3 13 0.029 2.8 8.9 0.0 1 23 217 239 217 239 0.97

4 13 8.6e-05 0.0085 16.9 5.7 1 21 246 266 246 267 0.94

5 13 2.6e-05 0.0025 18.5 1.1 3 23 280 300 280 300 0.98

6 13 0.00016 0.016 16.0 6.2 1 23 311 333 311 333 0.99

7 13 1.5e-05 0.0014 19.3 0.9 1 23 339 361 339 361 0.97

8 13 2.6e-06 0.00025 21.7 0.3 1 23 367 389 367 389 0.99

9 13 5.3e-06 0.00053 20.7 2.8 1 23 395 417 395 417 0.97

10 13 7.7e-06 0.00076 20.2 2.5 1 23 421 443 421 443 0.98

11 13 0.0021 0.21 12.5 0.4 2 23 454 477 453 477 0.90

12 13 0.073 7.2 7.7 1.4 3 23 485 506 484 506 0.96

13 13 0.00029 0.028 15.2 5.9 1 23 511 534 511 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.017	1.7	9.6	1.3	1	20	118	137	118	139	0.93
2	13	2.8e-06	0.00028	21.5	0.4	3	23	190	211	188	211	0.92
3	13	0.029	2.8	8.9	0.0	1	23	217	239	217	239	0.97
4	13	8.6e-05	0.0085	16.9	5.7	1	21	246	266	246	267	0.94
5	13	2.6e-05	0.0025	18.5	1.1	3	23	280	300	280	300	0.98
6	13	0.00016	0.016	16.0	6.2	1	23	311	333	311	333	0.99
7	13	1.5e-05	0.0014	19.3	0.9	1	23	339	361	339	361	0.97
8	13	2.6e-06	0.00025	21.7	0.3	1	23	367	389	367	389	0.99
9	13	5.3e-06	0.00053	20.7	2.8	1	23	395	417	395	417	0.97
10	13	7.7e-06	0.00076	20.2	2.5	1	23	421	443	421	443	0.98
11	13	0.0021	0.21	12.5	0.4	2	23	454	477	453	477	0.90
12	13	0.073	7.2	7.7	1.4	3	23	485	506	484	506	0.96
13	13	0.00029	0.028	15.2	5.9	1	23	511	534	511	534	0.98

Sequence Information

Coding Sequence: ATGTTTGCTTATTTGGCATCCAAGAGAGCGCTGCCTTCAAAGCCGAGAAGTAGTGTGCTACTTTTGAACgcatcgaaaaaatcaaaacttgCAAAAAAACTTGAGCCAGACTCAGATATTGCATTCGTCAAAGATGATCCAGAGGCGCCAACTCAACATTACCTGATAACAGAATTCAAAGGCGATGAGGACAACGAGATTGATCTTGTTCTTACACAAAACCGATCTCAAGACGAAAGTGGTCAGCCAGCCGAATGTGTCGAAGAGATCCACTTCAATGAGCTACACAGCGATGAAGGGGGCAATAATAGTGACGGTGAGAACAACATTAACACGCGGGAAATTATCGAACACGTCTGTGGCAAGTGTTTCAAATCGTTTCGATTGATAAAGGCGTTTAAACGTCACCTGGCCTACTGTATTTTTAACAGCGAAATGGTATTGCGAAGAGCAGAAATGCAAAAGAACATTGAAAAGATCGAAAAGGAGGCCATTGGTATGGAAAAGAAAGATATCTGTTTCTGCTGTGGTGACAACTACGATACCTGTCATTTGGGCCACATAAACTGCACCGAATGTCCAAAAACctttaaaacacaaatttcacttGAACGCCATATGTTTCTTATTCATTCGGAAACGAACGATTTCCCTTGTGATGTCTGCAATGGCAGTATTCGAACGGAAGCACTGTTGAAATTGCACATTGAGCAACACAAAAACCGTGGCAAGCCGTTTGCTTGCAAAACCTGTGGAAAGGACTTTACACGACTGTATCATTTGAAACGGCATCATAAACACTCCGCGTGTGGTGAGGGATTACCTGAAACTATGGGTTGTAAGGTGTGTGGCAAGAAATTCTTTCGCATGGACAACTTGCGTGTCCATCTAAAGGCTCATTTGGGTCAGGGTACACCCAAGAAAGCCGAGTATACATGCCCGTGCTGCAAAAAGTGCTTCTACAGTTTGTCAACTCTAAACATTCACATTCGAACTCATACTGGCGAGCGGCCTTTTGATTGTGATATTTGTGAAAAGAATTTTCCATCGCTAGTCTCGCTGAAAAAGCACAGGAGATATCACACAGGCGAGAAGCCATACACATGTGATATTtGCGGCCAAAACTTTGCGGTCAAAGAAGTCCTCAACCGGCACATGAAGCGACACACTGGTGAAAAACCACATGTCTGCTTGAACTGCAACAAACGCTTTATTCAAGCTACCCAATTGAAGAACCATTTGCGTACACACGAGCGACCATTTGAATGCACCGAGTGCCCTGagaaattcaaaacagaaaagcaATTTGAGAAGCACTACAAAACGCACAAAGGGAAAAAGGCATGGAAGGCGTCTTGCACTTGCGTGGATTGTGAGTTGCAATTTCCCAGTCGAGCCGCCCTGACAAGGCATGAGAAGACCGCTATCCACATTGAAAACGTGAAGAAATTTTGTCCTGAATGTGGCATTAAATGCGACGATCTGAAGTCCCTAGAATTCCATATGCTTAAAAAGCACGAAACTACTGAATACAAGTGCGATAAGTGCGATTTAACGTATCGACAACTCCATATGTTACAACATCACAAGAAAACCGTTCACATTACGGGTCCACCCAAACCATCATTCGAAATACCCGCTGATGCAGtgaagaatgaaatgaatgactGCATTGTACTTCAGGAATTCATCGTTGAATCGTTCGGAACAGAAGTGACTGAGATCGACCAAAAGCAATTCACAGTGATTGCCCAAGACGGTGATGTGTCGCCGGACTTTAAGGAAAGCAAacaagagataaaaaaaaagtcaccaACACTTCGGGCCGAACTAAAAGAGTCGCTGGTGAATTGTTTGCGCGAAGATCCAGCTAAAAAAGTAGTTGAGAACGTCATGAGCGCGGACGATTTGGAAATCAGCGAGAATGTTGGTAAATTGCTTGATATGCTAGTAGACGTAGAGACGCTTGGAAAATTTGGCTGGCCACAAGATCCTGTTGAGAATGTTCTTTGTAAGGTCATTGAGAACTGTGGCTATAATCTGTACAAGACGAAATTCACCGAAGATTATGGCACAAGGATGAGGGAATATGTGAAACTTATGTTTACAGTGGTCATACAAAATGATTCAATCAAGGAGCTCTTGAATAATTATCCAATAGATGAAGTTATTGCGTTTGTGCTTTCCAATGAAGACGACGAgttgaaattgtaa
Protein Sequence: MFAYLASKRALPSKPRSSVLLLNASKKSKLAKKLEPDSDIAFVKDDPEAPTQHYLITEFKGDEDNEIDLVLTQNRSQDESGQPAECVEEIHFNELHSDEGGNNSDGENNINTREIIEHVCGKCFKSFRLIKAFKRHLAYCIFNSEMVLRRAEMQKNIEKIEKEAIGMEKKDICFCCGDNYDTCHLGHINCTECPKTFKTQISLERHMFLIHSETNDFPCDVCNGSIRTEALLKLHIEQHKNRGKPFACKTCGKDFTRLYHLKRHHKHSACGEGLPETMGCKVCGKKFFRMDNLRVHLKAHLGQGTPKKAEYTCPCCKKCFYSLSTLNIHIRTHTGERPFDCDICEKNFPSLVSLKKHRRYHTGEKPYTCDICGQNFAVKEVLNRHMKRHTGEKPHVCLNCNKRFIQATQLKNHLRTHERPFECTECPEKFKTEKQFEKHYKTHKGKKAWKASCTCVDCELQFPSRAALTRHEKTAIHIENVKKFCPECGIKCDDLKSLEFHMLKKHETTEYKCDKCDLTYRQLHMLQHHKKTVHITGPPKPSFEIPADAVKNEMNDCIVLQEFIVESFGTEVTEIDQKQFTVIAQDGDVSPDFKESKQEIKKKSPTLRAELKESLVNCLREDPAKKVVENVMSADDLEISENVGKLLDMLVDVETLGKFGWPQDPVENVLCKVIENCGYNLYKTKFTEDYGTRMREYVKLMFTVVIQNDSIKELLNNYPIDEVIAFVLSNEDDELKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00312856;
90% Identity: iTF_00315376;
80% Identity: -