Cgro005544.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- -
- Assembly
- GCA_963082955.1
- Location
- OY720144.1:78697298-78702417[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.22 22 6.2 3.8 1 23 1098 1121 1098 1121 0.95 2 12 8.6e-05 0.0085 16.9 5.0 2 23 1282 1303 1282 1303 0.97 3 12 0.00012 0.012 16.4 0.2 3 23 1311 1331 1309 1331 0.98 4 12 1.4e-07 1.3e-05 25.7 3.6 2 23 1338 1359 1337 1359 0.97 5 12 2.4 2.4e+02 2.9 0.1 5 23 1372 1390 1370 1390 0.96 6 12 0.007 0.69 10.9 3.4 3 23 1397 1418 1395 1418 0.95 7 12 0.13 12 6.9 0.1 2 23 1429 1449 1428 1449 0.96 8 12 6.6e-05 0.0065 17.2 0.8 1 19 1455 1473 1455 1474 0.96 9 12 5.3e-05 0.0052 17.5 0.5 1 23 1485 1507 1485 1507 0.99 10 12 0.0002 0.019 15.7 9.0 1 23 1513 1535 1513 1536 0.96 11 12 0.001 0.1 13.5 4.7 1 23 1541 1563 1541 1563 0.98 12 12 0.0013 0.13 13.2 6.0 1 23 1569 1591 1569 1592 0.96
Sequence Information
- Coding Sequence
- ATGGGTGGCAACGTACAGTGTCCAGTATGTACATTATTCCTCCTTCCCGGTATGGACTTGTCCGACCACTTGGAGACCCATCCAAAGGAACAAGTCATTAAAGCACTCGTACAAATGAGCCTAAAATCTGAAGTAACAGAAACAGTTACGCCTGACACTCCGAAGAAAGTCAGCTCTGCACCATCAATCGAGAATGAGGTCCATCATCGGACAACCGAAGACGAACGAGCAACTCCCATGTCAGTGGCCAGTGAGAGCACGGTGGGATTAAATGAAAAGCAAAGGGAGTTGCAGGATAATATTAACCTAGCTCCGATACCTCAGAGTATTTCATTGAATAGACAATGTGGATATCTGTTTGAGAACAACAGCAGTAGCAGTAGTAGTAGCAGTAGTAGTAATTTCTTTGGACCACCGACTCCATATtaccatcaacatcatcatcatcaacaccaacaacagcaacaactccaacagcagcagcagcaacagcaacagcatcatTTACAAAATTATCATACGTATAACGGACATGCGGGCCCATCACAGCCTCCATTGCGACTCTTCTCCTATCAACCAAACCCCAAGCCGTTACAACCACCACCCGCCTATGGCGCCGCCATAAGTCAACTTCGATCTCAAAATAGCCAAAACCTGATGGTGAGCCACATCAATCGTCCCCAATATTCGCCGGGAAATCACACATCGATGTCATCCGCATCGAAATCTTCGCTGTCGGTGGTATCTTCGCGTCTgccaccaccactaccaccgCCACCCCTAAACCAACGTTTTCAGTCCAGCTTCCCGCAGATGGAAACACCGCCCTTCACCGACACATGTGACAGCAGTGCAATGTCGCCGCGTCGAACATCGATGACTCCCCCGATACGACCCCCTCCGCAGCTGTACCGTTCACCGCTTTCATCAGCCGGACAGTACTCACGGCAGTCCAGCTCGCCCTACTCAGTGATGACTGGTTCACCATCTGTGCTGAGATTTGCTGAATCACCGGTGACCGCACACTACCTTGAGCGGGAAAATGGCGACTTTATTGTCCAAGAAACGCCCAAACATGTGGTCGAGTGTGTGGAAAAAGACGACGGCGAGTTTTCCGTGATAGAACGCGTCTATCACATGCCACCGAGTGTTGTTCAGATAAACGAGGATCAAGATGATGACTTGTCTTCCGACCACGGATCCAACAGCGATGACATGAAACTGATGGAAGACGATCTTCCAGGTGGAACGTGGTCTGGTGCACGATCGCCAGAACAGGGCCAAACATCGCCACAGAAAAAGTCAGGCATTACCGTGCTCAGTGATGTCCAATTAGACTTAAACGAGTACCTAGACTTGATGGGCAACATAATAGCATCCAGCAAGGTTGCTAAATCTCGTACTGAAATGATAAAGATTGAGAAATTCGAACCCGAGGAGGTGAAGGAAGAAATGTCGGGCGCTATCTGCCTCGACAACAACGAGGAGGACAACGAGAATGATATTTCAATGGAAAACGAGCAAAAACTAGAAGAAACAAAGGAGGAAAACCAGTATAGTGACGAGTCGTCATGTTATCCTGTCCCATTACCAATGGCATATTCTTCTGGTTGTGTGACGCCGGCATCGTCGGTGACAAGTGTTATACGATTGGCGACAAACACCAGCGCAAGGAGCAGTACTCCTTCAACAATCATCATGCAAGTGGATGACAAAAGCACGAAAGTTGAGGACGCAGTGCCGTCAACGAGCCCCGATATACAAGTAACCAAGATCGAGGACCCTGTGACAACCTCTGATGCAGTACCCACGGAAGTGGCAAATAACTCCAACTCAAATGTTGAGGATGCAACAAGCACTGATACAACCGTTGCCAAAGTTGAGGAAGCAATAGACTCACAATCTCAAACCCCCACGGAGAAACCCCAGATGCCGGAGAAGCCAGAAAAACCCGAAAGGCAATCGAAGAAAGAGGGCAAGTCGCCAATTCTTCCGTATTATCAGTCAGTCAGACGACCTATCAAAAAGACCCCCAAGAAGCTTGTCATCAAACCAAGAAGCAAGGACACAGCAGCATCGGCACCAAGGCAAATGCAAGTAGAAAAGCCATCCACCTCGAAGGACACTGCTTCCGTGGAGCATCAAAAAGAGGAAGTCCTCGCCAAGGTGTGCGAAACAACTCAGGAAAATGAACTAAATAGCATTAAGACTGAAAGTCTTACAGTCACCACCTCGGAATCGATTCCTCCGCCGCTTTTTGCCGATGCCGACGAGAAGCTTCCACCCGATGATGAGCTGCTGCCTTGCACCTCGAATGCAAACGCCACAGAGGCAGACGCAACTGGTGCTGCTTTTCCGAGTGCTACTATAGAAGACAAGCCCACCGCTGATCTGACAGCATTCCTTGACCAGTGCATGAAAAAAGAGGAAGAGGCAGAGGATCATCCAATGCATTCTATATTCGGCGCAGAGTGTGCGCCGGAAGTGTCGGAGACATTAAACGATCCGATTTCATCACCAGCATCACCACCCATATTCCCTTCGGCTTCTTTGTTCTCTAAGCCGTTGACGGCCAGTCCGGAACAACTGACTGCATCCGAGTCTGTGCTTCTCGATAGCAGTGATATGCATGAACATGATCCAATACCACCGCAGCAGAAGCAAACACAGCAACAAACTGCATCCTCGTACGTTGAGTACCCTTTCAGTTTTCTGTACGGCGCCGAGGCTAATCATCAGGACGAGAACAAGCACAACATCTCGCCGCCAATATATTGCAGCGAAGACTTCAACAAGTACAGTGCGAGTACGAGTGGAGGGAACAGCGCCAGCTGCACATGGTATCAGTCGCAAAGCAGTGAAAATGATTTCGAAATGGACGGCAAGGGGAGTTACCTTGATCTGGACTCGTGCAAGCGAAGTGCATCATTTGCAGCCGCAACGGAGGGAAGTATGCCGACAACAGATACCCTAAACATCAGAACTGACGAGAAGATGCCAGCAAAGGGCGAGATCTCCGAGCAAGAGAGCAATTGTGGCGTGGAGAACTCATGGAGCCAACCGCTGTACAACGAGTTCCCGGTGCGGTTCCCGATTCCCTATCAGAACTTCATGACCAACCAAGAGAGCTGGAGCCACGATAACTACTTTCGTCCGCAGGACCTTAGCTCATCTGTCGAGACAAAGAAcTTTAGTTTGCGGCTAACCGAGGAGTCCCCCATCATGGATACTCTGCCATCCACGTCAAAGCGAAAGAACAAGGCTGTCGCCAAGTTGCCGCGCAAGAAATCTTTCCAGTGTTCACATTGCAACACTCATTTCCCACTGCTGAAGGAGAAGAACGCCCACTTGATCAAACAGCACGGATACAAGCGCGTGAATCGACGTCTTATCCGTGACCCACCGACTTCTACTGTTACGACGGCGACAATGAACACTGACGCTGGTGCCTCTTTGCTGCTTGGTCTCGAACCGAGTGTACTTCCTCCACCGCTGGCCGATGAGGACGACTCCAAAGCGGCGATTGTCAAAATCGAACAAGACAACAAAGAGCTTAAGGATTGCAAGAAAAGCATCTCTAATCTAGCACTGACCAGCAACACAGTGACGACGGCTGCCAATGCAAACGTCTCCCGCACTAAGTACGACTCGATGCGAGCGCGAGACAATCGAATGctaatcaatttcaatttgaatgcgCTCAACGTCAAGAACGAGGGAAAGACCGAGGTCGAAACGCACAGCTACTATCAGGAGTCTAAATCGGCGTTCTTCTGTTTTGTGTGTAGACGGGACTTTCTCACGGTTAAGCTGTTCGACGAGCATTTGGTTGAACATCCCGCCGAGTGTTTCACATGCCACAAGACGTTCACGAGGTGGAAAAATTTCATGGTCCACCTGAAGCGTCATCTCGGGTGGAAAGACTTTGGCTGCACCATCTGCGAGAAGAAGTTCGTAATTCGCAGTGCGCTGGTCGAACACATGCGAATGCACACCGGTCATACTCCGCTCAAGTGTAAGATTTGCGGCAAGAGTTTCAAACGCTATTCCAACTTAACGCAACACCGCAAGCGTCATGGCAACAGAATCAGCCGTACCAAAGAGTACGTTTGCTATTGCGGCGAGGTGCTGCCGTCGAAAGCACGCTTTATCTGGCATAAAGAGACGCACGACTTGAAACCGAAATGCTGCCCCTACTGTCGGGATCGGTTTGTGCACGCCAACAGCCTGCGCCGCCACATACGACTGGCACACTCCGATAAGTTCGACTACACCGAACCAATGGAGTGTCCGATGTGCAAACAAATTTACGCCAAATCCAGCATCAAAGCTCACATGGCGACCCATTCAATGGACACACAGCATGAGTGTCTGATTTGCAATAAATCCTTCAGCACCAAATGGAATTTGAAAATCCACAACTGGGTGCACGCCAATCGCACCACAAAACCCTTCAAATGCGATCAATGCGTGAAGGCGTTTGTCCGCGAAGTCGACTACAACAACCACATGAACTCGCACAAACAGATCAAGCCATACACGTGCGAGCACTGCGGCTGCAAATTCATACGCAAATACAACTACATACGACATCGGCGTGAGCATCACGGCAACAAAAAATTCACATGCGATCTCTGCGGCAAACTCTTCCACCGGCACTACTATCTGATCGAACATCGACGCATCCACACTGGCGAGCGACCATTTCAGTGCACGATATGCGGTAAGAGTTCCACCACCAAGACGAACCACAACAAACACCTGAAGATTCACCACTCGCGGGATCCGTTCACATCGGAGGCGTAA
- Protein Sequence
- MGGNVQCPVCTLFLLPGMDLSDHLETHPKEQVIKALVQMSLKSEVTETVTPDTPKKVSSAPSIENEVHHRTTEDERATPMSVASESTVGLNEKQRELQDNINLAPIPQSISLNRQCGYLFENNSSSSSSSSSSNFFGPPTPYYHQHHHHQHQQQQQLQQQQQQQQQHHLQNYHTYNGHAGPSQPPLRLFSYQPNPKPLQPPPAYGAAISQLRSQNSQNLMVSHINRPQYSPGNHTSMSSASKSSLSVVSSRLPPPLPPPPLNQRFQSSFPQMETPPFTDTCDSSAMSPRRTSMTPPIRPPPQLYRSPLSSAGQYSRQSSSPYSVMTGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDQDDDLSSDHGSNSDDMKLMEDDLPGGTWSGARSPEQGQTSPQKKSGITVLSDVQLDLNEYLDLMGNIIASSKVAKSRTEMIKIEKFEPEEVKEEMSGAICLDNNEEDNENDISMENEQKLEETKEENQYSDESSCYPVPLPMAYSSGCVTPASSVTSVIRLATNTSARSSTPSTIIMQVDDKSTKVEDAVPSTSPDIQVTKIEDPVTTSDAVPTEVANNSNSNVEDATSTDTTVAKVEEAIDSQSQTPTEKPQMPEKPEKPERQSKKEGKSPILPYYQSVRRPIKKTPKKLVIKPRSKDTAASAPRQMQVEKPSTSKDTASVEHQKEEVLAKVCETTQENELNSIKTESLTVTTSESIPPPLFADADEKLPPDDELLPCTSNANATEADATGAAFPSATIEDKPTADLTAFLDQCMKKEEEAEDHPMHSIFGAECAPEVSETLNDPISSPASPPIFPSASLFSKPLTASPEQLTASESVLLDSSDMHEHDPIPPQQKQTQQQTASSYVEYPFSFLYGAEANHQDENKHNISPPIYCSEDFNKYSASTSGGNSASCTWYQSQSSENDFEMDGKGSYLDLDSCKRSASFAAATEGSMPTTDTLNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFPVRFPIPYQNFMTNQESWSHDNYFRPQDLSSSVETKNFSLRLTEESPIMDTLPSTSKRKNKAVAKLPRKKSFQCSHCNTHFPLLKEKNAHLIKQHGYKRVNRRLIRDPPTSTVTTATMNTDAGASLLLGLEPSVLPPPLADEDDSKAAIVKIEQDNKELKDCKKSISNLALTSNTVTTAANANVSRTKYDSMRARDNRMLINFNLNALNVKNEGKTEVETHSYYQESKSAFFCFVCRRDFLTVKLFDEHLVEHPAECFTCHKTFTRWKNFMVHLKRHLGWKDFGCTICEKKFVIRSALVEHMRMHTGHTPLKCKICGKSFKRYSNLTQHRKRHGNRISRTKEYVCYCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICNKSFSTKWNLKIHNWVHANRTTKPFKCDQCVKAFVREVDYNNHMNSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00312092;
- 90% Identity
- iTF_00316264; iTF_00315437; iTF_00313762; iTF_00312935; iTF_00314635; iTF_00312092;
- 80% Identity
- -