Cscu009898.1
Basic Information
- Insect
- Cheilosia scutellata
- Gene Symbol
- -
- Assembly
- GCA_955612985.1
- Location
- OY015312.1:21451260-21456438[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.25 29 6.1 3.8 1 23 1115 1138 1115 1138 0.95 2 12 9.6e-05 0.011 16.9 5.0 2 23 1299 1320 1299 1320 0.97 3 12 0.00013 0.016 16.4 0.2 3 23 1328 1348 1326 1348 0.98 4 12 1.5e-07 1.8e-05 25.7 3.6 2 23 1355 1376 1354 1376 0.97 5 12 2.7 3.2e+02 2.9 0.1 5 23 1389 1407 1387 1407 0.96 6 12 0.0079 0.93 10.8 3.4 3 23 1414 1435 1412 1435 0.95 7 12 0.14 17 6.9 0.1 2 23 1446 1466 1445 1466 0.96 8 12 7.5e-05 0.0088 17.2 0.8 1 19 1472 1490 1472 1491 0.96 9 12 5.9e-05 0.007 17.5 0.5 1 23 1502 1524 1502 1524 0.99 10 12 0.00022 0.026 15.7 9.0 1 23 1530 1552 1530 1553 0.96 11 12 0.0012 0.14 13.5 4.7 1 23 1558 1580 1558 1580 0.98 12 12 0.0014 0.17 13.2 6.0 1 23 1586 1608 1586 1609 0.96
Sequence Information
- Coding Sequence
- ATGGGTGGCAACGTACAGTGTCCAGTATGTACATTATTCCTCCTTCCCGGTATGGACTTGTCCGACCACCTAGAGACCCATCCAAAGGAGCAAGTCATCAAAGCACTCGTACAAATGAGCCTCAAATCTGAAGTTACCGAGACAGTTACGCCTGATAATCCCAAGAAAGTCAGCTCAACACCATCAATCGAGAATGACGTCCATAATCGGACAACAGAAGAGGAACGAACAACGCCCATGTCAGTGGCCAGTGAAAGCACGGTGGGAATAAATGAAAAGCAACGGGAGTTGGAAGATAATATTAACTTGACTCCGATACCTCAGAGTCTTTCATTGAATAGACAATGTGGATATTTGTTTGAAAACAACAACAGTAGCAGTAGTAGTAGCAGTAATAGTAATTTCTTTGGGCCACCGACTCCATATTACCATCaacatcatcagcatcatcaacaccagcaacaacaacaacaacaccaccagcagcaacaacaacaacaacaacaacaacaacaacaacagtctTTACAAAATTATCATACCTATAACGGACATCCGGGCCCGTCTCAGCCTCCAATGCGACTCTTCTCCTATCAACCAAGCCCCAAGCCGTTACAACCACCACCCGCCTATGGCGCCGCCATAAGTCAACTTCGATCTCAAAATAGCCAAAATCTGATGGTGAGCCACATCAATCGTCCCCAATATTCGCCGGGAAATCACACATCAATATCATCCTCATCGACATCCTCGATGTCGGTGGTATCTTCACGTCTGCCGCCACCACTACCGCCGCCACCTTTAAGTCAACGTTTTCAGTCCAGCTTCCCGCAGATGGAAACGCCGCCCTTCACCGATACTTGTGACAACGACGCAATGTCGCCGCGCCGGTCGTCGATGACACCCCCGACACGACCACCTCCCCAGTTGTACCGATCGCCGCTTTCATCAGCCGGCCAGTTCTCGCGGCAGTCGAGCTCGCCCTACTCCGTGATGACTGGATCACCATCTGTGCTGAGATTTGCTGAATCACCGGTGACCGCACACTATCTTGAGCGGGAAAATGGCGACTTTATAGTACAAGAAACGCCCAAGCACGTGGTCGAGTGCGTCGAAAAAGACGACGGCGAATTTTCCGTGATAGAACGCGTCTATCACATGCCACCGAGTGTTGTTCAGATAAATGAGGACCAAGACGATGACTTGTCGTCCGACCATGGATCCAACAGTGAAGACATGAAACTGATGGACGACGATATGCCGGGTGGAACGTGGTCTGGTGCACGATCGCCCGAACAAGGTCAAACATCGACACAGAAAAAGTCCGGCATTACCGTGCTCAGTGATGTTCAATTAGACTTAAACGAGTACCTAGACCTGATGGGCAACATAATAGCCTCCAGCAAGGTGGCTAAGTCTCGTACTGAATTGATAAAAATTGAAAAGTTCGAACCCGAGGAGGTGAAGGAAGAAATGTCGGGCACTATTTGCCTTGACAATGACGAAGAGGAGAACGAGAACGATATTTCGATGGAAAACGAgcaaaaactagaagaaacaaAGGAGGAACAGCAACAGTATAATGACGAGCTGTCATGTTATCCTGTTCCAGTACCAATGTCGTGTTCTTCTGGTTGTGTGACGCCGGCATCGTCGGTGACAAGTGTTATACGATTGGCTACAAATCCCAGCGCAAGGAGCAACACTCCTTCAACAATCATTATGCAAGTGGATGAGAAAAGCACTGACACGAAAGTTGAGGACGCAGCGCCGTCGACGAGCAGTGATATAAAAATAACCAAGGTCGAGGAATCTGTAAAGACCTCTGATGCGGTACCCATGGAGGCAAACAGCTCCAACACACATGTTGAGGAAGCAACAAGCACTGATACACCCGTTGCTAAAGTTGAGGAAGCAATGCAGGCGACCTGCCTAGCAGACTCACAATCTCAAACCCCTACGGAGAAGCCCCAGATGCCGGAGAAGCAAGAAAAACCCGAGAAACAATCGAAGAAGGAGGGAAAGTCGCAAATTCTTCCGTATTATCAGTCAGTCAGGCGACCCATTAAAAAGACCCCCAAAAAGCTTGTCATCAAGCCAAGAAGCAAAGACACACCAGCAACAGCTCCAAGGCTGCAAATAGAAAGGCCATCCACCTCAAAGGACACTCCTTTGGTGGAGCATCAAAAAGAAGAAGTCCTCCCCAACGTGTGCGAAACAACTCAGGAAAATGAACTAAATAGCATTAAGACTGAAAGTCTTAGTGTCACCACTTCGGGCTCGACTCCTCCTCCGCTTTTTGCTGATGCCGATGAGAAGCTTCCACCCGATGATGAGTTGCTACCTTGTACATCGAAAGCAATCGCCACAGAGGAAGACGCAGcagctactgctgctgctgctttgCCGAGTTCTACTTTAGAAGACAAGCCCACCGCTGATCTGACAGCATTTCTTGACCAGTGCATGAAAAAGGAGGAAGAGGCAGAGGAGCATCCAATGCACTCAATATTTGGTGCAGAATGTGTGCCGGAAACGCCGGAGACATTTAACGACCCGATTGAATCCCCAGCATCACCACCTATATTCCCTTCGGCTTCGCTGTTCTCCAAGCCATTGACGGCCAACTCGGAACAGCTGACTGCATCCGAGTCTGTGCTTCTCGACAGCAGTGATATGCACGAACATAGTCCACCACCACCGCAGCAAAAACAAGCACAGCAACAAACGGCTTCCTCGTACGTTGAGTACCCCTTCAGTTTTCTCTATGGCGCCGAGGCTAATCATCAGGATGAGAACAAGCACAACATCTCGCCGCCGATATATTGCAGTGATGACTTCAATAAGTACAGTGCAAGTACGAGTGGGGGGAACAGCGCCAGTTGTACGTGGTATCAGTCGCAGAGCAGTGAAAATGATTTCGAAATGGACGGCAAAGGGAGCTACCTAGATCTGGACTCGTGTAAGCGAAGTGCATCATTTGCCGCCGCAACGGAGGGAAGTATGCCGACGACAGATACTCTAAACATAAGAACTGACGAGAAGATGCCAGCGAAGGGGGAGATCTCCGAGCAAGAGAGCAATTGTGGTGTGGAGAACTCATGGAGCCAACCGCTTTACAACGAGTTCCCGGTGCGGTTCCCGATTCCCTATCAGAACTTCATGACGACCCAAGAGAGCTGGAGCCACGATAACTACTTTCGTCCGCAAGATCTCAGCTCATCTGTCGAGACAAAGAACTTTAGTTTGCGGCTAACAGAGGAGTCCCCCATAATGGATACTCtgccatcgacttcaaagcgAAAGAACAAGGCCATCGCTAAGTTGCCGCGCAAGAAAACTTTCCAGTGTTCACATTGCAACACTCATTTCCCACTGCTGAAGGAGAAGAACGCGCACTTAATCAAACAGCACGGATACAAGCGTGTGAATCGCCGACTTATACGTGACCCACCGACTTCGACTGTTACCACGGCGACAATGAACACTGACGCTGGTGCCTCTTTGCTGCTTGGTCTGGAACCGAGTGCCCTACCCCCACCGCTGGCCGAAGATGACGACTCCAAAGCGGCAATTGTCAAAATCGAACAAGAGAACAAAGAGCAAAAGGATTGCAAGAAAAGTATATCTAATCTAGCACTGACCAGCACCACAGTGACGACGACTGCCAATGCAAACGTCTCCCGCACTAAATTTGACTCGATGCGAGCACGGGACAACCGAATGcttatcaatttcaatttgaatgcGCTCAACGTCAAGAACGAGGGAAAGGCGGAAGTCGAAACGCACAGCTACTATCAGGAGTCAAAATCGGCGTTCTTCTGCTTTGTGTGTCGACGGGACTTTCTCACGGTTAAGGTGTTCGACGAGCATTTGGTTGAGCATCCCGCCGAGTGTTTCACATGCCACAAGACGTTCACGAGGTGGAAAAACTTTATGGTCCACCTAAAGCGTCATCTTGGCTGGAAAGACTTTGGCTGCACCATCTGTGAGAAGAAGTTCGTAATTCGCAGCGCGCTAGTCGAACACATGCGAATGCACACCGGTCATACTCCCCTGAAGTGTAAAATTTGCGGCAAGAGTTTCAAACGCTATTCCAACTTAACGCAGCACCGCAAGCGTCACGGTAACAGAATCAATCGTACCAAAGAGTATGTCTGCTATTGTGGCGAGGTGCTGCCGTCGAAAGCGCGCTTTATCTGGCATAAAGAGACGCacgacttaaaaccgaaatgctGCCCCTACTGCCGGGATCGCTTTGTGCACGCAAACAGCCTGCGCCGCCACATACGACTGGCCCACTCCGATAAGTTCGACTACACCGAACCAATGGAGTGTCCGATGTGCAAGCAGATTTACGCCAAATCCAGCATCAAAGCGCACATGGCGACCCATTCAATGGACACACAGCATGAGTGTCTAATTTGCAATAAATCCTTCAGCACCAAATGGAATCTGAAAATCCACAACTGGGTGCACGCCAATCGCACGACAAAGCCCTTCAAATGCGATCAGTGCGTGAAGGCGTTTGTGCGCGAAGTCGACTACAACAACCACATGAACTCACACAAACAGATCAAGCCATATACGTGTGAGCACTGCGGCTGCAAATTCATACGCAAATACAACTACATACGACATCGGCGTGAGCATCACGGCAACAAGAAATTCACATGCGATCTCTGCGGCAAACTTTTCCACCGGCACTACTATCTAATCGAACATCGCCGTATACACACTGGCGAGCGACCATTCCAGTGTACGATATGCGGCAAGAGTTCCACCACTAAAACGAACCACAATAAACACCTGAAGATTCACCACTCGCGGGATCCGTTCACATCGGAGGCGTAA
- Protein Sequence
- MGGNVQCPVCTLFLLPGMDLSDHLETHPKEQVIKALVQMSLKSEVTETVTPDNPKKVSSTPSIENDVHNRTTEEERTTPMSVASESTVGINEKQRELEDNINLTPIPQSLSLNRQCGYLFENNNSSSSSSSNSNFFGPPTPYYHQHHQHHQHQQQQQQHHQQQQQQQQQQQQQQSLQNYHTYNGHPGPSQPPMRLFSYQPSPKPLQPPPAYGAAISQLRSQNSQNLMVSHINRPQYSPGNHTSISSSSTSSMSVVSSRLPPPLPPPPLSQRFQSSFPQMETPPFTDTCDNDAMSPRRSSMTPPTRPPPQLYRSPLSSAGQFSRQSSSPYSVMTGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDQDDDLSSDHGSNSEDMKLMDDDMPGGTWSGARSPEQGQTSTQKKSGITVLSDVQLDLNEYLDLMGNIIASSKVAKSRTELIKIEKFEPEEVKEEMSGTICLDNDEEENENDISMENEQKLEETKEEQQQYNDELSCYPVPVPMSCSSGCVTPASSVTSVIRLATNPSARSNTPSTIIMQVDEKSTDTKVEDAAPSTSSDIKITKVEESVKTSDAVPMEANSSNTHVEEATSTDTPVAKVEEAMQATCLADSQSQTPTEKPQMPEKQEKPEKQSKKEGKSQILPYYQSVRRPIKKTPKKLVIKPRSKDTPATAPRLQIERPSTSKDTPLVEHQKEEVLPNVCETTQENELNSIKTESLSVTTSGSTPPPLFADADEKLPPDDELLPCTSKAIATEEDAAATAAAALPSSTLEDKPTADLTAFLDQCMKKEEEAEEHPMHSIFGAECVPETPETFNDPIESPASPPIFPSASLFSKPLTANSEQLTASESVLLDSSDMHEHSPPPPQQKQAQQQTASSYVEYPFSFLYGAEANHQDENKHNISPPIYCSDDFNKYSASTSGGNSASCTWYQSQSSENDFEMDGKGSYLDLDSCKRSASFAAATEGSMPTTDTLNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNEFPVRFPIPYQNFMTTQESWSHDNYFRPQDLSSSVETKNFSLRLTEESPIMDTLPSTSKRKNKAIAKLPRKKTFQCSHCNTHFPLLKEKNAHLIKQHGYKRVNRRLIRDPPTSTVTTATMNTDAGASLLLGLEPSALPPPLAEDDDSKAAIVKIEQENKEQKDCKKSISNLALTSTTVTTTANANVSRTKFDSMRARDNRMLINFNLNALNVKNEGKAEVETHSYYQESKSAFFCFVCRRDFLTVKVFDEHLVEHPAECFTCHKTFTRWKNFMVHLKRHLGWKDFGCTICEKKFVIRSALVEHMRMHTGHTPLKCKICGKSFKRYSNLTQHRKRHGNRINRTKEYVCYCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICNKSFSTKWNLKIHNWVHANRTTKPFKCDQCVKAFVREVDYNNHMNSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00312092;
- 90% Identity
- iTF_00311300;
- 80% Identity
- -