Basic Information

Insect: Chalcosyrphus nemorum
Gene Symbol: lov
Assembly: GCA_949716465.1
Location: OX454335.1:2614825-2625716[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.8e-18 4.4e-15 55.3 0.0 1 44 615 658 615 659 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.8e-18	4.4e-15	55.3	0.0	1	44	615	658	615	659	0.96

Sequence Information

Coding Sequence: ATGTTAAACGACTCCGGAGGCGTGGGAGCACGACTAAGAGGAAGAAGGAGGACGACGTCAAggataacaaaaacaacaacaacgacgaagaTTTTCAAACCCACAATGACGACAAACAACGCCAGCAATCAGGACCACTACAGTCTGCGGTGGAACAACCATCAAAATCACATCCTGAGAGCATTTGACGCACTTTTGCAGACAAAGACACTGGTCGACGTCACTCTCGTGTGTGCAGAGACCAGCATTAGGGCGCACAAGATGGTGCTCTCCGCGTGCTCGCCGTTTTTCCAGCGTGTCTTTGCCGAAACTCCCTGCAAGCATCCGGTCATAGTGCTGAAGGACTTCCGCGGCTGGGTTGTGCAAGCGATTGTGGATTTCATGTACCGCGGCGAGATAAGTGTCCCCCAAGAGCGACTACAGACACTCATTCAGGCGGGTGAGTCCCTGCAAGTTCGAGGCCTGGTCGAGAGCTCAGTGCCGGAGACAACACCAACGCCGGCTGCGTCGCCCGACGACTTTGGCATGATCGACACATCGCTAATGTCCTCCGAGCTGGAGCGCTGCTCGAGCTTTGACGATGAGTCACCATCGATGGTGACAGCTGGGTCGAAAATAATCCTGCCATCCCGCCTCTTCGCACCGTCTCACAGTGAGACCGCTGCGCACAACACATCTACAGGGTCACAGCCGGAGCTGTGTACATCACCGATGCCACGGCGGAAGCAGGCGAGACCGCGTCGTCGATCTGGGGAATGTGCCCCGCACGAGCTGAGCAAACCGTCGACACCGGTTCCCATGGACGAACCCACCGCCGAGACAGTgataaaaaacgaagaagaaccCTTAGACAACGAGGACCTTAAGGAGGACGAGGAACACGCCGAGCATCAGGCACCAGAACGACCGGAATCCAGTCTCAACGGCGACGCCGATGGCGATGATGAACTCGAACAAAACCTCGAAGAAAAGGACGACATCCACAAGCGGGACACTGAAAGCCCCGCCGAGGGCCCCGAAGACCTCTGCACGAAAAAGGACACCAACGGCAGCAGCGATCCCACCCTACACGATGACAGTAGCAATatactcaacaacaacaacaataacacgaACAAATTGAATAACAATCGAATAGTCCTCTCGTTAAAGGACATCCGACAGCTGAACAAACCACCATCCATTGGCCGCGGAGGCGGACATCCCTTTCCACCGAACTTGCGAGACCTAGACGCGCAAATgcacgccgccgccgccgacttTCATATGGATCAAATGGACCTCTCGCTGGCCGCAGCAGCTGCGGCCGCTGCAGCGCAACATCATCAGAATCGACAGGAGCAAcagcatcaccatcatcatcaccagcaaCAGCAGGCCCAACAGCAGGCGCAGCAACAACATCAAGCGCAACAGCAGCATCAGTATGCGAATAGTCTGCTGGGGCAAATGGGAATGCCAGGACTGCATCCTCCCGGGCAATTTGGTCACGAACGAATGGAGGACAGTATGAATCGTATGAGCAAGGATTTTACACCATCGTCACCGATGAGCCTACCATCGCATTTCAATCCGCCCGATGGTCCGCCACATCCGCCGTCGCCGCTGCCCTTTCCTGGAATGTCCTCGGCGCTGACACTAACGCCGCCACACAtgTTCGGTTTGGACTCCCCGCTTGGACTCTTCCCGCCCGGCATTGATCCTGGCAAACTGTATAACCCCCTAATGGAAATGTCTGATCCGCGTGGCTTAGGTGGCGATCACCCGCcatttctaaaaaagaaaatgtcCCGCCCAAAAGGTCAGCATTCAGCGCCTCGAGGTGGCCCACCGCGCTCCTGGACAAACGCCGAACTAACCGAAGCCCTTCAGCACGTGTGGAACAAGAAGATGACCACAAGTCAAGCCTCACGAATATTCGGCATTCCCTACAACTCCCTCCTCATGTACGTTCGCGGGAAGTACGGAAAAAGCCTCAAGCTCGAGCAACTCCGCAAGGACTGCATCAGTGGCCCACCAGTGGAACTGCTCACCATGGGCCTGAGCAACAACAACGGCGGCAATGGCACTGGATCCAgtggcagcaacaacaacagcaataagAACCTCGACTCGAATCGCAGTAAAGACTCGCGCGACATGGACTGCGGCGGCGGTGGAAACGGTGGCGGCAACGGACCACCTGGTGGTCCCATGGGTCCACGTAGCTCAAGCTCCGAGCCGGACCTCCTGTCAGGGCCCAACTCAATATTCAATCCATTCCAACAGGGATTCTATCCCGACTTCCCCGGTGGATTCCCCGGCCTCCCGCTCGGAATGCTGAACCTCCTCCCGCCCGAAAGACACCAGCAATCGGCGGCagccgctgctgctgccgccgccaTGCACATGGCAATCGATGAAGACTGCAAATCGGATCGATCCAAGCAATCCATGGACGAGGAATTCCCCCAGCCGCTGGCCCTCAATCGTGACGAGCGTCGCGAGCTGACGCAACAGAACGGGCAGGATTGA
Protein Sequence: MLNDSGGVGARLRGRRRTTSRITKTTTTTKIFKPTMTTNNASNQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPETTPTPAASPDDFGMIDTSLMSSELERCSSFDDESPSMVTAGSKIILPSRLFAPSHSETAAHNTSTGSQPELCTSPMPRRKQARPRRRSGECAPHELSKPSTPVPMDEPTAETVIKNEEEPLDNEDLKEDEEHAEHQAPERPESSLNGDADGDDELEQNLEEKDDIHKRDTESPAEGPEDLCTKKDTNGSSDPTLHDDSSNILNNNNNNTNKLNNNRIVLSLKDIRQLNKPPSIGRGGGHPFPPNLRDLDAQMHAAAADFHMDQMDLSLAAAAAAAAAQHHQNRQEQQHHHHHHQQQQAQQQAQQQHQAQQQHQYANSLLGQMGMPGLHPPGQFGHERMEDSMNRMSKDFTPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGLGGDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLTMGLSNNNGGNGTGSSGSNNNSNKNLDSNRSKDSRDMDCGGGGNGGGNGPPGGPMGPRSSSSEPDLLSGPNSIFNPFQQGFYPDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAAAMHMAIDEDCKSDRSKQSMDEEFPQPLALNRDERRELTQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00310382; iTF_01521801; iTF_01521985; iTF_00672778; iTF_00672930; iTF_01116367; iTF_01116546; iTF_00893777; iTF_00894085; iTF_00694802; iTF_00694510; iTF_00724691; iTF_00724910; iTF_01541363; iTF_01541545; iTF_00664212; iTF_00663980; iTF_00665556; iTF_00984372; iTF_00984146; iTF_01542132; iTF_01542322; iTF_00313590; iTF_00310949; iTF_00315862; iTF_00316088; iTF_00311164; iTF_00313372; iTF_00314453; iTF_00314188; iTF_00312735; iTF_00312511; iTF_00389750; iTF_00389538; iTF_00672150; iTF_00672308; iTF_00693686; iTF_00693962; iTF_00426263; iTF_00426502; iTF_00188313; iTF_00187982; iTF_00671673; iTF_00671523; iTF_00976377; iTF_00976650; iTF_00315290; iTF_00315073; iTF_01211834; iTF_01212098; iTF_01299930; iTF_01300161; iTF_00670876; iTF_00671047; iTF_00688796; iTF_00688525; iTF_00991676; iTF_00991921; iTF_01396412; iTF_01396661; iTF_00664766; iTF_00664986; iTF_01044638; iTF_01044839; iTF_01300766; iTF_01301008; iTF_01357088; iTF_01356768;
90% Identity: iTF_01541363;
80% Identity: iTF_00310382;