Nint031523.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Neoascia interrupta
Gene Symbol
lov
Assembly
GCA_947623515.1
Location
OX392462.1:146897406-146919268[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-18 8e-15 55.3 0.0 1 44 613 656 613 657 0.96

Sequence Information

Coding Sequence
ATGTTAAACGACTCCGGAGGCGTGGGAGCACGACACCGAAGAAGGAGAACGACGAGGGTACCGACTACGACAACGACGATTATCACCCCCACAATGACGACAAACAACGCCAGCAATCAGGACcactacagtttgcggtggaacaaccatcaaaatcacatcctgagagcgtttgacgcactcctgcagaccaaagcgcttgtagatgtcactctcgtgtgtgcggagagtaccagcatccgagcgcacaaaattgttctatccgcgtgttcaccttttttccagcgtgtctttgccgaaactccctgtaaacacccggtcatagtacttaaggactttcgtggatgggtcgttcaagccattgtcgactttatgtaccggggcgagataagcgtacctcaagagaggctacaaacactcattcaagctggcgagtctctgcaggttcgcggtctagTCGAAAGCTCAGTGCCAGAGACAACGCCTACGCCAGCTGCATCTCCGGATGATTTCGGCATGCTCGATACATCACTGATGTCATCGGAGTTGGAGCGCTGTTCGAGTTTCGATGACGAATCACCCTCGATGGTGACAGCTGGGTCGAAGATTATCCTACCATCCCGCCTCTTTTCATCGTCTCACAATGAGAGTAATGCAGCGCACAATACATCAACGGGATCGCAACCGGAACTGTGTACATCACCGATGCCACGAAGAAAACAAGCTCGGCCACGTCGGCGATCTGGAGAGTGTGCTCCGCACGAGTTGAGTAAACCTTCCACACCGGTGCCACATGACGAACCCGCCACGACAGTGATAAAAAACGAGGAGGAACCCCTGGATAATGAGGATCTCAAAGAGGATGAAGAGCCGCACCCTCCTGAAAGACCAGAATCCAGTCTTAACGGTGACGCAGAAGGCGATGATGAAATCGAACAAAACTCCGAGGAAAAAGAAGAAGAAGAAGAGGAAGACGTGAATAAGAGGGACACAGAAAGCCCAGCCGAAGGACCAGAAGACCTCTGCACAAAAAAGGACAACAGTGGCGGCAACGATCCCGGCCTTCATGACGATGGTAGCAACATAATCAATAACAACAACAACACAAACAAACTAAACAACAATCGCATAGTTCTGTCTCTAAAGGATATCCGCCAATTGAACAAGCCACCTTCGATTGGTCGCGGTAGTGGTCATCCCTTTCCACCAAGCTTACGAGACTTAGACGCCCAAATGCACGCTGCTGCTGCGGATTTTCACATGGACCAGATGGACTTGTCACTagctgccgcggcagcagcagcagcggcacaacatcaccaaaatcggcaggaacaacaacatcaccaccatcatcaacagcagcaagcgcaacaacaggcgcagcagcagcaccaggcacaacagcagcatcagtCGTACGCGAATAGTCTGCTAGGGCAAATGGGAATGCCTGGTCTACACCCACCCGGCCAGTATGGCCACGAACGGATGGAGGAGAGCATGAATCGTATGAATAAGGATTTTACACCAAGTTCACCGATGAGCCTGCCATCGCACTTTAATCCTCCCGATGGGCCACCGCATCCGCCATCGCCACTGCCCTTTCCTGGCATGTCCTCGGCGTTGACACTCACGCCACCACACATGTTTGGCCTAGACTCACCGCTGGGACTTTTTCCACCCGGTATAGATCCTGGAAAGCTGTACAATCCCCTTATGGAAATGTCCGATCCACGTGGATTGGGTGGTGATCACCCACCATTTCTGAAAAAGAAAATGTCCCGCCCAAAAGGTCAACACTCAGCACCGCGTGGAGGTCCACCACGTTCCTGGACCAACGCCGAGCTAACCGAAGCGCTTCAGCATGTTTGGAACAAAAAGATGACAACAAGCCAAGCATCTAGAATATTTGGAATCCCCTACAACTCCCTGCTGATGTATGTTCGAGGGAAATATGGCAAGAGCCTGAAGCTCGAACAACTGCGAAAGGACTGCATTAGCGGACCACCTGTGGAACTTCTAACCATGGGCCTAAACAGTAACAATGGTGGAGCTGGTGGTAACGGTGGCTCTGGCAATGGAAGCAACAATGGCAATAAAAACCTAGACTCAAATCGCAGCAAAGACTCTCGCGACATGGACTGTGGTGGAAATGGTGGCAATGGACCACCAGGTGGCCCGATGGGTCCCCGAAGCTCTAGCTCTGAACCAGATCTCCTGTCAGGGCCCAATTCAATATTCAATCCTTTCCAGCAAGGTTTCTATCCGGATTTCCCTGGTGGCTTTCCCGGTCTACCACTAGGTATGCTTAATTTACTCCCGCCCGAAAGACACCAGCAATCAGCAGCGGCTGCCGCTGCTGCTGCCGCCATGCACATGGCAATCGACGAAGACTGCAAATCGGATCGATCGAAACAATCTATGGATGAAGAATTCTCCCAACCGATGGCGCTGAATCGCGACGAACGTCGAGAGTTGACGCAACAGAACGGGCAGGATTGA
Protein Sequence
MLNDSGGVGARHRRRRTTRVPTTTTTIITPTMTTNNASNQDHYSLRWNNHQNHILRAFDALLQTKALVDVTLVCAESTSIRAHKIVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPETTPTPAASPDDFGMLDTSLMSSELERCSSFDDESPSMVTAGSKIILPSRLFSSSHNESNAAHNTSTGSQPELCTSPMPRRKQARPRRRSGECAPHELSKPSTPVPHDEPATTVIKNEEEPLDNEDLKEDEEPHPPERPESSLNGDAEGDDEIEQNSEEKEEEEEEDVNKRDTESPAEGPEDLCTKKDNSGGNDPGLHDDGSNIINNNNNTNKLNNNRIVLSLKDIRQLNKPPSIGRGSGHPFPPSLRDLDAQMHAAAADFHMDQMDLSLAAAAAAAAAQHHQNRQEQQHHHHHQQQQAQQQAQQQHQAQQQHQSYANSLLGQMGMPGLHPPGQYGHERMEESMNRMNKDFTPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGLGGDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLTMGLNSNNGGAGGNGGSGNGSNNGNKNLDSNRSKDSRDMDCGGNGGNGPPGGPMGPRSSSSEPDLLSGPNSIFNPFQQGFYPDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAAAMHMAIDEDCKSDRSKQSMDEEFSQPMALNRDERRELTQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00310172;
90% Identity
iTF_01541363;
80% Identity
iTF_01044839;