Basic Information

Insect: Rhingia campestris
Gene Symbol: lov
Assembly: GCA_932526435.1
Location: CAKOBE010000464.1:169869-179975[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.2e-18 7.1e-15 55.3 0.0 1 44 592 635 592 636 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.2e-18	7.1e-15	55.3	0.0	1	44	592	635	592	636	0.96

Sequence Information

Coding Sequence: ATGTTAAACGACTCCGGAGGCGTGGGAGCACGACAGCGAAGAAGGAGGAGGACGACGACTACGACAACGACGATTATCACCCCTACAATGACGACAAACAACGCCAGCAATCAGGACcactacagtttgcggtggaacaaccatcaaaatcacattctaagagcgttcgacgcgctccttcagacgaagacgcttgttgatgtcacgctcgtgtgtgcggagaccagcataagggctcacaaaatggttttgtccgcctgttcgccgtttttccaacgtgtgtttgcggaaactccatgcaaacacccagttatagtactgaaagactttcgaggatgggttgtgcaggccattgtcgactttatgtaccgcggtgaaataagcgttccacaagaaaagctgcaaacgctcatacaagccggagagtcactgcaagttcgtggtttggTTGAAAGTTCCGTGCCAGAGACAACACCGACGCCAGCTGCATCACCAGATGACTTTGGCATGATTGACACGTCGCTGATGTCGTCTGAGCTGGAACGTTGCTCTAGCTTTGATGATGAATCGCCTTCTATGGTGACATCAGGATCAAAAATAATTCTACCATCCCGCCTATTCACATCTACTCACAACGAGAGTACGACTCTCAACACATCGACTGGGTCACAACCGGAGCAGTGTACATCACCGATGCCACGAAGAAAGCAGGCGAGACCTCGTCGTCGATCGGGAGAATGTGCTCCACATGAATTAAGTAAACCTTCGACACCAATCCCACAAGATGATCCCGCCGATGCAGTAATTAAGAATGAAGACGAACCTTTAGACAATGAAGAACTAAAGGAAGATGATGATCACCATATACAAGAGCGACCAGAGTCTAGCTTAAATGGTGACGCAGACGCCGAGGACGAAAATGAACAAAATTTAGAGGAGAAAGACGACATTCAAAAGCGAGACACTGAAAGCCCTGTAGAAGGCCCCGAAGACCTGTGCACAAAAAAGGACTCTACTGGCAATAATGATCCCAATATTCATGATGATAGTAATAATGCTATCAATAACAATAACAATAATACCAACAAGTTGAATAACAATCGGATAGTTCTCTCGCTAAAGGATATTCGGCAGTTGAACAAACCCACATCAATTGGTCGCTCCGGTCACCCATTTCCATCAAACTTGCGAGATATGGACGCACAAATGCATGGATCTGCTCAAGATTTCCATATAGATCAAATGGATTTGTCAATAGCCGCTGCAGCAGCGGCTGCTGCCGCTCAGCATCATCAAAACCGTCAAGACCAACAGCACCATCATCATCACCAACAGCAAGCGCAACAGCAACATCACTCGTATGCCAACAGTATATTGGGGCAAATGAGTATGCAGGGACTTCATCCGCCGGGGCAATTTGGTCACGAACGAATGGAGGATAGTATGAGTCGCATGAACAAGGACTTTACACCAACGTCACCAATGAGCCTTCCATCGCATTTTAATCCACCCGATGGGCCACCACATCCACCATCACCACTGCCCTTTCCAGGAATGTCATCAGCGCTGACACTAACACCGCCACACATGTTTGGCTTGGATTCTCCGCTAGGACTTTTCCCACCTGGTATTGACCCTGGCAAATTATATAACCCGCTGATGGAAATGTCTGATCCACGTGGACTAGGCGATCATCCACCATTTCTCAAAAAGAAAATGTCCCGTCCAAAAGGACAACACTCAGCTCCTCGAGGTGGCCCTCCAAGATCATGGACAAATGCCGAACTAACTGAGGCTCTTCAACATGTGTGGAATAAAAAGATGACAACAAGTCAAGCATCACGGATATTTGGGATTCCTTACAATTCCTTGTTAATGTATGTTCGTGGAAAATATGGTAAAAGTCTGAAGTTGGAGCAGCTGCGTAAGGACTGTATAAGTGGCCCACCAGTGGAACTATTAACAATGGGCTTAAGCAATAATAATGGCAGCGGTGGAGTTGGAGGTTCTAATAATAATAATGGCGGTAGTAAAAATATCGATTTGAATCGAAGCAAAGATTCTCGAGAATTGGATTGCGGTGGAAATGGAGGCAATGGACCTCCAGGTGGCCAAATGGGCCCACGAAGTTCAAGCTCAGAACCGGATCTCCTATCAGGACCAAATTCAATATTCAATCCATTCCAACAAGGATTCTATCCCGATTTCCCTGGTGGCTTTCCTGGGCTTCCACTCGGAATGTTGAATCTTCTCCCGCCAGAAAGGCATCAACAATCCGCGGCAGCAGCTGCAGCAGCCATGCACATGGCTATCGATGAAGACTGTAAATCCGATCGATCCAAACAATCTATGGACGAGGAATTTCCCCAACCATTAGCACTTAATCGAGACGAGCGACGAGAACTGATGCAACAAAATGGGCAGGATTGA
Protein Sequence: MLNDSGGVGARQRRRRRTTTTTTTIITPTMTTNNASNQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQEKLQTLIQAGESLQVRGLVESSVPETTPTPAASPDDFGMIDTSLMSSELERCSSFDDESPSMVTSGSKIILPSRLFTSTHNESTTLNTSTGSQPEQCTSPMPRRKQARPRRRSGECAPHELSKPSTPIPQDDPADAVIKNEDEPLDNEELKEDDDHHIQERPESSLNGDADAEDENEQNLEEKDDIQKRDTESPVEGPEDLCTKKDSTGNNDPNIHDDSNNAINNNNNNTNKLNNNRIVLSLKDIRQLNKPTSIGRSGHPFPSNLRDMDAQMHGSAQDFHIDQMDLSIAAAAAAAAAQHHQNRQDQQHHHHHQQQAQQQHHSYANSILGQMSMQGLHPPGQFGHERMEDSMSRMNKDFTPTSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGLGDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLTMGLSNNNGSGGVGGSNNNNGGSKNIDLNRSKDSRELDCGGNGGNGPPGGQMGPRSSSSEPDLLSGPNSIFNPFQQGFYPDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAMHMAIDEDCKSDRSKQSMDEEFPQPLALNRDERRELMQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00310172;
90% Identity: iTF_00312735;
80% Identity: iTF_01300161;