Eper003877.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eristalis pertinax
Gene Symbol
lov
Assembly
GCA_907269125.1
Location
OU026146.1:2185182-2195335[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-18 3.4e-15 55.3 0.0 1 44 585 628 585 629 0.96

Sequence Information

Coding Sequence
ATGACGACAAACAACGGCAGCAATCAGGACCACTACAGCTTGCGGTGGAACAACCATCAGAATCACATCCTGCGCGCGTTCGACGCACTCCTGCAGACGAAGACGCTGGTCGACGTCACACTGGTGTGCGCGGAGACCAGCATTCGGGCGCACAAGATGGTCCTGTCGGCGTGTTCGCCCTTCTTTCAGCGTGTCTTCGCCGAAACGCCCTGCAAGCATCCGGTCATAGTGCTGAAGGACTTCCGCGGCTGGGTTGTGCAGGCGATCGTCGACTTCATGTACCGCGGCGAGATAAGCGTGCCACAGGAGCGGCTGCAGACGCTTATACAGGCCGGCGAGTCACTGCAGGTGCGCGGCCTCGTCGAGAGCTCCGTGCCCGAGACGACACCAACCCCGGCGGCGTCACCGGACGACTTCGGCATGATTGACACGTCGCTGATGTCCTCCGAGCTGGAACGCTGCTCCAGCTTCGACGACGAGTCCCCATCGATGGTGACAGCAAACTCAAAGATCATCCTGCCATCCCGCCTCTTTGCGTCATCGCACAGTGAGAGTGCCCCGCACAACACGTCGAGCGGCTCCCAGCCGGAGCTGTGCACGTCGCCGATGCCGAGGCGGAAGCAGGCGCGACCGCGTCGCCGGTCGGGCGAGTGTGCCCCGCACGAGCTGAGCAAGCCATCGACACCTATTCCGCTCGACGAACCCGCCACGGCGGTGATAAAGGACGAGAAGGAGACAATTGATAACGACGAACTGAAGGAGGACGGCGATGGTgaccaggaccaggaccaggaccagCACCCAGAGCGGCCCGAGTCCAGTCTGAATGGCGACGCCGAGGctgacgacgacatcgaacagACCCTCGAGGAGAAGGACGAGCTGCACAAGAGAGACGCCGACAGTCCAGCCGAGGGTCCAGAGGACCTCTGCACGAAGAAGGACACGTGCGTCAGCAACGACGTGCCCCTGCACGATGACGGCAGCAACAtattgaacaacaacaacaacatcaacaaactGAACAACAACCGGATAGTGCTCTCCCTGAAGGACATCCGCCAGCTGAACAAGCCGCCGTCAATTGGTCGCGGCGGACACCCGTTTCCACCGTCCTTGCGCGACTTGGACGCCCAAATGCACGCGGCCGCCGCCGATTTCCACATGGAACAAATGGACTTGTCCCTggccgcagcagcagcggcagccgcCGCCCAACACCATCAGAACCGAcaggagcagcagcatcatcaccatcatcaccagcagcagcaggcgcAGGCGCAAGCCGCCCAGCAACAGCATCAggcgcagcaacagcagcagcatcagtcgTACGCCAACAGTCTGCTGGGACAGATGGGCATGCCGGGCCTGCATCCACCGGGGCAGTACGGCCACGAGCGAATAGAGGACGCCATGAACCGCATGAGCAAGGACTTCACGCCCAGCTCGCCGATGAGCCTGCCGTCGCACTTCAATCCGCCCGATGGGCCGCCGCATCCACCGTCGCCGCTGCCCTTTCCCGGGATGTCATCGGCGCTGACATTGACACCGCCTCACAtGTTCGGCTTGGACTCGCCCCTCGGACTGTTTCCGCCTGGAATCGATCCCGGCAAGCTGTACAATCCGCTGATGGAAATGTCAGATCCCCGCGGAATGGGAGGAGATCACCCGCCATTTCTCAAGAAGAAAATGTCCCGCCCAAAAGGTCAGCACTCAGCCCCGCGAGGTGGACCGCCCCGATCGTGGACGAACGCCGAACTGACCGAAGCCCTGCAGCACGTGTGGAACAAGAAGATGACCACCAGTCAGGCGTCGCGGATATTCGGGATCCCGTACAACTCGCTGCTGATGTACGTCCGCGGCAAGTACGGCAAGAGTCTCAAGCTGGAGCAGCTGCGCAAGGACTGCATAAGTGGCCCGCCCGTCGAACTCCTCCAAATGGGCCTGAGTAGCAACAATGGCGGCAGTGGATCCGGCgcaggtggtggcggcggcaatGGCAACGGCGGCTCCAGCGGTGGCACCAACAACGGCAACAAGAACATGGACTCAAATCGCAGCAAAGACTCGCGCGACATTGACTGTGGCGGAAACGGCGGTGGCAACGGTCCTCCGGGTGGCCCGATGGGACCGCGCAGCTCATCCTCCGAACCAGATCTGCTGTCCGGACCGAACTCAATTTTCAATCCATTCCAACAGGGCTTCTATCACGACTTCCCCGGCGGTTTTCCCGGCCTCCCACTGGGCATGCTCAATCTGCTGCCGCCCGAGCGACATCAGCAATCGGCAGcggccgctgccgccgccgcagcTGCCATGCACATGGCCATCGACGAAGACTGCAAATCGGATCGATCCAAGCAATCGATGGACGAGGACTTCTCCCAGCCGCTGGCACTGAATCGCAACGACGACCGCCGCGAGCTGACGCAACAGAACGGGCAGGATTGA
Protein Sequence
MTTNNGSNQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVESSVPETTPTPAASPDDFGMIDTSLMSSELERCSSFDDESPSMVTANSKIILPSRLFASSHSESAPHNTSSGSQPELCTSPMPRRKQARPRRRSGECAPHELSKPSTPIPLDEPATAVIKDEKETIDNDELKEDGDGDQDQDQDQHPERPESSLNGDAEADDDIEQTLEEKDELHKRDADSPAEGPEDLCTKKDTCVSNDVPLHDDGSNILNNNNNINKLNNNRIVLSLKDIRQLNKPPSIGRGGHPFPPSLRDLDAQMHAAAADFHMEQMDLSLAAAAAAAAAQHHQNRQEQQHHHHHHQQQQAQAQAAQQQHQAQQQQQHQSYANSLLGQMGMPGLHPPGQYGHERIEDAMNRMSKDFTPSSPMSLPSHFNPPDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMGGDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPVELLQMGLSSNNGGSGSGAGGGGGNGNGGSSGGTNNGNKNMDSNRSKDSRDIDCGGNGGGNGPPGGPMGPRSSSSEPDLLSGPNSIFNPFQQGFYHDFPGGFPGLPLGMLNLLPPERHQQSAAAAAAAAAAMHMAIDEDCKSDRSKQSMDEDFSQPLALNRNDDRRELTQQNGQD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00310172;
90% Identity
iTF_00672308; iTF_00671673; iTF_00671523; iTF_00670876; iTF_00671047;
80% Identity
iTF_00672308;