Cova015949.1
Basic Information
- Insect
- Chaetogeoica ovagalla
- Gene Symbol
- kn
- Assembly
- GCA_032441825.1
- Location
- CM063742.1:2385004-2398272[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-122 3.4e-118 395.8 0.2 205 501 1 302 1 310 0.87 2 2 2 2.3e+04 -6.9 8.5 487 550 338 390 306 412 0.40
Sequence Information
- Coding Sequence
- ATGCGTCGGTTTCAAgTGGTCATCTCGACGCAAGTTACAGTTGAAGGTCCACTGTTGGCCGTATCGGATAACATGTTCGTACACAACAATTCCAAACACGGTCGCCGAGCAAAACGTTTGGACCCGAACGACGGCATGTTTTCTCCTCTACCGGTAGCCACTCCGTGTATTAAACACATAACGCCCAGCGAAGGATGGACCCACGGCGGCGCTTCCGTCACCATATTGGGCGACAACTTTTTCGACGGGTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGaaCTACTAACACCGCACGCCATCCAAGTGCAAACACCGCCCAGACCCATACCCGGCATAGTGGAGGTGACATTGTCGTACAAATCCAAACAGTTTTGCAAAGGATCTCCAGGCAGATTCGCGTACATATCTCTCAGCGAACCCACCATCGATTACGGTTTTCAAAGGCTACAGAAATTCGTGCCCAGATATCCAGGTGATCCGGAAAAACTACCAAAGGAAGTGATCCTGAAACGGGCCGCAGATCTCGCCGAAGCGTTGTACACGATGCCCCGGAACAACCAACTGTCGCTGTCTTTGCCTCGGTCGCCGTGTTCTCGAGACAGAGACGCGAACAACATGTCGTCGACGGCGGGCGCAGCGGGCACCGGGTTCAATCCGTACACCGGACAGTTGGCGGTCACCGTCCACGACCACGGTTCTGCGGGCCAGTGGAACGACGACGACTACGGACGCGGCCAGAGCAGTAGCGTGTCGCCGAGAGGTGGCGGCTACGGGTCTAGTGCGTCCACACCGCACTCGAACAACGGTACAAACAGCAGCTCGTACATAAATCCACCACCGAGCGGAGGCGGAGGCGGCGGCGGaagtggtggcggcggcggtacaGGAAACGGTAGCGGCGGaggaggcggcggcggcggcggcggcggcggtggcggtaaCAATAGTGGAGGCACCGGTAGCGGAGGAAACCCGTCCAATCCGGGCGGTGCCAACGCCGGACCGAATTCCGGTTACAACGGTTCGACTCTGCCCAACACCACGTCGGCCGCGTCGTCCGTCCAGCTGACCAACATGAACTCGCCTACGGCCACCTCGCACCCGTCGATTTTCAACTCTTCGTCTAGAATGGGCACGCTGGTAACATCTCCGTTCGCTATGAATCCATTCGCACTACCTAATTGCAACGGACAGTCGTATGCTACTAGCCCGTTAATAAGCTCGTCAGCCAAATAA
- Protein Sequence
- MRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDANNMSSTAGAAGTGFNPYTGQLAVTVHDHGSAGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSNNGTNSSSYINPPPSGGGGGGGSGGGGGTGNGSGGGGGGGGGGGGGGNNSGGTGSGGNPSNPGGANAGPNSGYNGSTLPNTTSAASSVQLTNMNSPTATSHPSIFNSSSRMGTLVTSPFAMNPFALPNCNGQSYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304644; iTF_00811755; iTF_00134028; iTF_00940161; iTF_00670028; iTF_01169644; iTF_01330359; iTF_01346872; iTF_00184397; iTF_01432821; iTF_00340367; iTF_01499438; iTF_01037533; iTF_01167390;
- 90% Identity
- iTF_01346872;
- 80% Identity
- -