Cced008096.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- kn
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010000041.1:37944-53412[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-117 2.1e-113 379.8 0.2 205 478 1 279 1 287 0.88 2 2 0.55 5.4e+03 -4.6 6.5 487 540 324 376 308 398 0.53
Sequence Information
- Coding Sequence
- ATGCGGATTTTTCGTCCGGTGGTCATTTCCACGCAAGTCACGGTCGAGGGTCCCCTGTTGGCCGTATCGGACAACATGTTCGTGCACAACAATTCCAAACACGGTCGCCGAGCAAAACGTTTAGACCCCAATGACGGCATGTTTTCTCCCTTACCGGTGGCCACCCCGTGCATAAAACATATCACACCGAGCGAAGGATGGACCCACGGCGGCGCTTCGGTCACAATATTGGGCGACAATTTCTTCGACGGTTTGCAAGTGGTTTTCGGCAGCAATCTCGTCTGGAGCGAACTTTTGACCCCGCACGCCATACAAGTCCAAACACCGCCCAGGCCCATTCCCGGGCTAGTCGAGGTGACGCTGTCGTACAAATCCAAACAGTTTTGCAAAGGGTCACCCGGCAGATTCGCCTATATATCTCTCAGCGAACCGACCATTGATTACGGTTTCCAAAGACTTCAGAAATTCGTACCGAGATATCCGGGCGATCCCGAAAAACTACCAAAGGAAGTGATCCTGAAACGGGCTGCGGATCTGGCCGAAGCGCTGTACACGATGCCCCGGAACAATCAACTATCGCTATCGCTACCCAGGTCACCGTGTTCGCGGGATAGAGACGGCAACAACATGTCGTCTTCGGGAACCGGGGCCACCGGATTTAACCCGTACTCCGGTCAGCTGGCGGTGACCGTGCACGACCACGGGAATACGGGCCAGTGGAACGACGACGACTACGGACGCGGCCAGAGCAGCAGCGTGTCTCCCCGGGGCGGTGGCTACGGGTCGAGCGCTTCGACGCCGCACTCGACCAACGGCACCAATGGCAGCACGTACATAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTCCAATTCCGGTCCGAACAACGGAAACGGCGGTCAAAATTCCGGTTACAACGGTTCGCCGATGCCGAACACCACGACCGCCGCGTCGTCCGTTCAGCTGACCAACATGAACTCGCCGACGGCCAGCTCGCACCCGTCGCTCTTCAACACCTCGTCCAGAATGGGCACGTTGGTAACATCTCCATTCGCTATGAATCCGTTCGCGCTGCCCAACTGCAACGGACAGCCGTACGCCACCAGCCCATTGATCAGCTCGTCGGCGAAATAA
- Protein Sequence
- MRIFRPVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGLVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDGNNMSSSGTGATGFNPYSGQLAVTVHDHGNTGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSNSGPNNGNGGQNSGYNGSPMPNTTTAASSVQLTNMNSPTASSHPSLFNTSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308623;
- 90% Identity
- -
- 80% Identity
- -