Nrib013966.1
Basic Information
- Insect
- Nasonovia ribisnigri
- Gene Symbol
- kn
- Assembly
- GCA_027563275.1
- Location
- JANEHQ010000257.1:25545-38640[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-139 4.1e-135 452.2 7.9 181 562 7 410 3 419 0.79
Sequence Information
- Coding Sequence
- ATGACATGTTTTTTGTTTTATAGATTTTTCTTGAAGTTTTTCTTGAAATGCAATCAAAATTGTTTGAAAAACGCTGGCAATCCCAGGGACATGCGAAGGTTTCAAGTGGTCATATCGACACAAGTTACGGTTGAAGGTCCCCTGTTGGCCGTATCGGATAACATGTTCGTACACAACAATTCAAAACACGGACGCCGAGCAAAACGTTTAGACCCAAATGACGGCATGTTTTCTCCTCTGCCCGTGGCGACACCGTGTATAAAACACATTACACCGAGCGAAGGATGGACACACGGCGGAGCTTCGGTCACTATATTGGGTGATAATTTTTTCGACGGGTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGAACTATTGACTCCACACGCCATTCAAGTGCAAACACCGCCCAGGCCCATACCCGGCATCGTGGAGGTAACGTTGTCGTATAAATCCAAACAGTTTTGCAAAGGATCTCCCGGCAGATTCGCGTACATATCACTCAGCGAACCGACCATCGATTACGGTTTCCAAAGACTACAAAAATTCGTACCCAGATATCCAGGCGATCCCGAAAAACTACCAAAGGAAGTGATCCTGAAGCGGGCGGCGGATTTGGCGGAAGCACTGTATACGATGCCCCGGAACAATCAGCTGTCACTGTCGCTACCCAGGTCACCTTGCTCGCGGGACAGGGACGGCAACAACATGTCGACGTCGGCGGGGGCGGTGGGCACCGGTTTCAACCCGTACACCGGACAGCTAGCGGTGACCGTTCACGACCACGGTGCAACTGGTCAATGGAACGACGACGATTACGGACGCGGTCAGAGCAGCAGCGTGTCGCCTCGAGGCGGCGGTTACGGGTCCAGCGCATCGACACCGCACTCGACCAACGGCACGAACGGAAGCACGTACATAAATCCGCCGCCGACCAGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCGTCCAATTCCGGTCCCAACAACGGTAACGGTGGAAATTCCGGTTACAACGGTTCCGCCATGCCCAACACCACGTCGGCTGCGTCGTCTGTTCAGCTAACCAACATGAACTCGCCCACGGCCACCTCGCACCCGTCGCTATTCAACTCTTCCTCGAGAATGGGCACTTTGGTTACATCTCCGTTCGCAATGAATCCGTTCGCTCTACCTAACTGCAACGGACAGCCGTACGCCACAAGCCCGTTAATCAGCTCGTCTGCGAAATAA
- Protein Sequence
- MTCFLFYRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDGNNMSTSAGAVGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPPPTSGXXXXXXXXXXXXXXXXXXPSNSGPNNGNGGNSGYNGSAMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308623;
- 90% Identity
- iTF_01346872;
- 80% Identity
- -