Smay006836.1
Basic Information
- Insect
- Sipha maydis
- Gene Symbol
- kn
- Assembly
- GCA_034509805.1
- Location
- JASXSY010000411.1:109767-122001[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-116 6.2e-112 376.0 11.8 208 563 31 409 20 417 0.75
Sequence Information
- Coding Sequence
- ATGCGTTGTGTTCGGTCTTCACACATTCGGTTATGTTACAGTTTTAGACAACCAGTGGACGGTTTTTCTCCTCGGAAGTCTACTTATTACACACAAgtGGTCATTTCGACACAAGTCACGGTTGAAGGTCCCCTGTTGGCCGTATCGGATAACATGTTTGTACACAACAACTCCAAACACGGTCGCCGAGCAAAACGTTTAGACCCAAACGACGGCATGTTTTCTCCTCTACCCGTAGCCACTCCTTGTATTAAACATATCACGCCAAGCGAAGGATGGACTCATGGTGGAGCTTCGGTCACTATATTGggtgataatttttttgacgGATTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGAactATTGACTCCTCATGCCATACAAGTACAAACACCACCTAGACCCATACCAGGCATCGTGGAAGTGACGTTGTCATACAAATCTAAACAGTTTTGCAAGGGGTCTCCCGGAAGATTCgcatatatatCACTGAGTGAACCGACCATCGATTATGGTTTCCAAAGACTACAGAAATTCGTGCCTAGATATCCGGGTGATCCTGAAAAACTACCTAAGGAAGTGATTCTGAAACGAGCTGCGGACTTGGCAGAAGCTCTGTACACGATGCCCAGGAACAACCAGTTATCATTGTCATTGCCCAGGTCCCCATGTTCTCGAGACAGGGACGGCAACAACATGTCGTCGACGGGTTCCGCGGGTACCGGCTTCAATCCGTATACTGGTCAGCTAGCAGTCACAGTGCACGACCATGGAGCAACGGGTCAATGGAATGACGACGACTACGGACGCGGTCAGAGCAGCAGCGTGTCGCCTCGGGGCGGCGGCTACGGGTCCAGCGCATCGACGCCGCACTCGACCAACGGCACGAACGGCAGCACGTACATCAACCCGACGCCGACCAGCGTGGGCGgcggaggaggaggaggaggcggcggcggcggcggaagCGGCAACGGCGGCGGCAACCCGTCTAATTCCGGTCCGAACAATGGGAACGGCGGCAATTCCGTTTACAACGGGTCATCGATGCCCAACACCACGTCAGCAGCGTCGTCCGTTCAACTGACCAACATGAACTCGCCCACGGCCACCTCGCACCCGTCGCTCTTCAACTCCTCGTCCCGAATGGGCACTTTGGTAACATCTCCGTTCGCCATGAATCCTTTTGCGCTACCTAACTGCAACGGACAGCCGTACGCCACCAGCCCGTTAATCAGCTCATCGgcgaaataa
- Protein Sequence
- MRCVRSSHIRLCYSFRQPVDGFSPRKSTYYTQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDGNNMSSTGSAGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPTPTSVGGGGGGGGGGGGGSGNGGGNPSNSGPNNGNGGNSVYNGSSMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00308623;
- 90% Identity
- iTF_00811755; iTF_01432821; iTF_00940161; iTF_01304644; iTF_00134028; iTF_00670028; iTF_01169644; iTF_01499438; iTF_00308623; iTF_01037533; iTF_01167390;
- 80% Identity
- -